Disentangling the genetic basis of rhizosphere microbiome assembly in tomato (metagenomics part)

Ben Oyserman (Wageningen University & Research (WUR) (Creator)
S.W. Sarango Flores (Creator)
Thom Griffioen (Creator)
Xinya Pan (Creator)
Elmar van der Wijk (Creator)
Lotte Pronk (Wageningen University & Research (WUR) (Creator)
Wouter Lokhorst (Creator)
Azkia Nurfikari (Creator)
Joseph N. Paulson (Creator)
Mercedeh Movassagh (Creator)
Nejc Stopnisek (Creator)
Anne Kupczok (Creator)
Viviane Cordovez da Cunha (Creator)
Victor Carrion Bravo (Universiteit Leiden) (Creator)
Wilco Ligterink (Creator)
Basten Snoek (Creator)
Marnix H Medema (Creator)
Jos M. Raaijmakers (Creator)

NIOO - Microbial Ecology (ME)

Dataset

Description

Here, taxonomic and (meta)genomic features of the rhizosphere microbiome were mapped as quantitative traits of a tomato recombinant inbred line population. This is the metagenomic part of the project (the first part (amplicon sequences) is stored under the BioProject PRJNA787039).

Date made available	02 Mar 2022
Publisher	European Nucleotide Archive (ENA)

Access Dataset

https://www.ebi.ac.uk/ena/browser/view/PRJNA789467

1 Article

Disentangling the genetic basis of rhizosphere microbiome assembly in tomato
Oyserman, B. O., Flores, S. S., Griffioen, T., Pan, X., van der Wijk, E., Pronk, L., Lokhorst, W., Nurfikari, A., Paulson, J. N., Movassagh, M., Stopnisek, N., Kupczok, A., Cordovez, V., Carrion, V. J., Ligterink, W., Snoek, B. L., Medema, M. H. & Raaijmakers, J. M., 16 Jun 2022, In: Nature Communications. 13, 1, 16 p., 3228.
Research output: Contribution to journal/periodical › Article › Scientific › peer-review

Open Access
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69 Citations (Scopus)

85 Downloads (Pure)

Cite this

Oyserman, B. (Creator), Sarango Flores, S. W. (Creator), Griffioen, T. (Creator), Pan, X. (Creator), van der Wijk, E. (Creator), Pronk, L. (Creator), Lokhorst, W. (Creator), Nurfikari, A. (Creator), Paulson, J. N. (Creator), Movassagh, M. (Creator), Stopnisek, N. (Creator), Kupczok, A. (Creator), Cordovez da Cunha, V. (Creator), Carrion Bravo, V. (Creator), Ligterink, W. (Creator), Snoek, B. (Creator), Medema, M. H. (Creator), Raaijmakers, J. M. (Creator) (02 Mar 2022). Disentangling the genetic basis of rhizosphere microbiome assembly in tomato (metagenomics part) . European Nucleotide Archive (ENA).

Disentangling the genetic basis of rhizosphere microbiome assembly in tomato (metagenomics part)

Description

Access Dataset

Research output

Disentangling the genetic basis of rhizosphere microbiome assembly in tomato

Cite this