Netherlands Institute of Ecology (NIOO-KNAW)

  • Droevendaalsesteeg 10

    6708 PB Wageningen

    Netherlands

Research Output

2019

Microbe-driven chemical ecology – past, present and future

Schmidt, R. L., Ulanova, D., Wick, L. Y., Bode, H. B. & Garbeva, P. V., 2019, In : ISME Journal. 13, p. 2656-2663

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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106 Downloads (Pure)

Microbial amendments alter protist communities within the soil microbiome

Xiong, W., Li, R., Guo, S., Karlsson, I., Jiao, Z., Xun, W., Kowalchuk, G. A., Shen, Q. & Geisen, S., 2019, In : Soil Biology & Biochemistry. 135, p. 379-382 4 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Microbial invasions in terrestrial ecosystems

Thakur, M. P., van der Putten, W. H., Cobben, M. M. P., Van Kleunen, M. & Geisen, S., 2019, In : Nature Reviews Microbiology. Online, p. 621-631

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Modeling water quality in the Anthropocene: Directions for the next-generation aquatic ecosystem models

Mooij, W. M., van Wijk, D., Beusen, A. HW., Brederveld, R. J., Chang, M., Cobben, M. M. P., DeAngelis, D. L., Downing, A. S., Green, P., Gsell, A. S., Huttunen, I., Janse, J. H., Janssen, A. B. G., Hengeveld, G. M., Kong, X., Kramer, L., Kuiper, J. J., Langan, S. J., Nolet, B. A., Nuijten, R. J. M. & 4 others, Strokal, M., Troost, T. A., Dam, A. M. V. & Teurlincx, S., 2019, In : Current Opinion in Environmental Sustainability. 36, February, p. 85-95

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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148 Downloads (Pure)

Modelling induced bank filtration effects on freshwater ecosystems to ensure sustainable drinking water production

Gillefalk, M., Mooij, W. M., Teurlincx, S., Janssen, A. B. G., Janse, J. H., Chang, M., Köhler, J. & Hilt, S., 2019, In : Water Research. 157, p. 19-29 11 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Modelling the spatial dynamics of Maui dolphins using individual-based models

de Jager, M., Hengeveld, G. M., Mooij, W. M. & Slooten, L., 24 Jun 2019, In : Ecological Modelling. 402, p. 59-65

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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111 Downloads (Pure)

Mogelijke invloed buxusmotbestrijding op pimpel- en koolmezensterfte

Guldemond, A., Leendertse, P., van Beek, J., Hoftijser, E. & van Oers, K., 2019, Jaarverslag Broedseizoen 2018: Nestkast: Landelijk NEtwerk voor STudies aan nestKASTbroeders. NIOO-KNAW, p. 34-36

Research output: Chapter in book/volumeChapterProfessional

Open Access
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8 Downloads (Pure)

Moisture is more important than Temperature for Assembly of Both Potentially Active and Whole Prokaryotic Communities in Subtropical Grassland

Lupatini, M., Suleiman, A. K. A., Jacques, R. J. S., Pylro, V. S., van Veen, J. A., Kuramae, E. E. & Roesch, L. F. W., 2019, In : Microbial Ecology. 77, 2, p. 460-470

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Molecular quantification of Plasmodium parasite density from the blood retained in used RDTs

Robinson, A., Busula, A. O., Muwanguzi, J. K., Powers, S. J., Masiga, D. K., Bousema, T., Takken, W., de Boer, J. G., Logan, J. G., Beshir, K. B. & Sutherland, C. J., 25 Mar 2019, In : Scientific Reports. 9, 5107.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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29 Downloads (Pure)

More salt, please: global patterns, responses, and impact of foliar sodium in grasslands

Borer, E. T., Lind, E., Firn, J., Seabloom, E. W., Anderson, T. M., Bakker, E. S., Biederman, L., LaPierre, K. J., MacDougall, A. S., Moore, J. L., Risch, A. C., Schütz, M. & Stevens, C. J., 2019, In : Ecology Letters. 22, 7, p. 1136-1144

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Muizenkerkhof: Beleef de Lente

Sepers, B., 17 Mar 2019.

Research output: Working paper/discussion paperWeb articlePopularizing

Open Access

Mutation dynamics of CpG dinucleotides during a recent event of vertebrate diversification

Pértille, F., Da Silva, V. H., Johansson, A. M., Lindström, T., Wright, D., Coutinho, L. L., Jensen, P. & Guerrero-Bosagna, C., 03 Jul 2019, In : Epigenetics. 14, 7, p. 685-707 23 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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76 Downloads (Pure)

Na regen komt zonneschijn: Beleef de Lente

Sepers, B., 10 Mar 2019.

Research output: Working paper/discussion paperWeb articlePopularizing

Open Access

Negative effects of vertebrate on invertebrate herbivores mediated by enhanced plant nitrogen content

Zhu, Y., Zhong, Z., Pages, J. F., Finke, D., Wang, D., Ma, Q., Hassan, N., Zhu, H. & Wang, L., Mar 2019, In : Journal of Ecology. 107, 2, p. 901-912

Research output: Contribution to journal/periodicalArticleScientificpeer-review

New insights in belowground drivers of plant performance

Wilschut, R. A. & Geisen, S., 05 Apr 2019, Global Soil Biodiversity Initiative.

Research output: Working paper/discussion paperWeb articleProfessional

Next Generation Biological Control: The Need for Integrating Genetics and Evolution

Leung, K., Ras, E., Ferguson, K., Ariëns, S., Babendreier, D., Bijma, P., Bourtzis, K., Brodeur, J., Bruins, M., Centurión, A., Chattington, S., Chinchilla-Ramírez, M., Dicke, M., Fatouros, N., Cabrera, J. G., Groot, T., Haye, T., Knapp, M., Koskinioti, P., Le Hesran, S. & 18 others, Lirakis, M., Paspati, A., Pérez-Hedo, M., Plouvier, W., Schlötterer, C., Stahl, J., Thiel, A., Urbaneja, A., van de Zande, L., Verhulst, E., Vet, L., Visser, S., Werren, J., Xia, S., Zwaan, B., Magalhães, S., Beukeboom, L. & Pannebakker, B., 01 Nov 2019, In : Preprints.org.

Research output: Contribution to journal/periodicalArticleScientific

Open Access
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69 Downloads (Pure)

Nieuwe 'Handreiking Natuurdaken' brengt daklandschap tot leven

NIOO-KNAW, 29 Mar 2019, Nature Today.

Research output: Working paper/discussion paperWeb articlePopularizing

Nitrification inhibitors effectively target N2O-producing Nitrosospira spp. in tropical soil

Cassman, N., Soares, J. R., Pijl, A. S., Lourenço, K. S., van Veen, J. A., Cantarella, H. & Kuramae, E. E., 2019, In : Environmental Microbiology. 21, 4, p. 1241-1254

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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201 Downloads (Pure)

Nitrogen fixation does not axiomatically lead to phosphorus limitation in aquatic ecosystems

van Gerven, L. P. A., Kuiper, J. J., Mooij, W. M., Janse, J. H., Paerl, H. W. & de Klein, J. J. M., 2019, In : Oikos. 128, 4, p. 563-570

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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206 Downloads (Pure)

Odours released by bacteria affect the foraging behaviour of primary and secondary parasitoids differently: Plain Language Summary

Goelen, T., Sobhy, I. S., Vanderaa, C., de Boer, J. G., Delvigne, F., Francis, F., Wäckers, F., Rediers, H., Verstrepen, K. J., Wenseleers, T., Jacquemyn, H. & Lievens, B., 04 Dec 2019, (Functional Ecology).

Research output: Working paper/discussion paperWeb articlePopularizing

Open Access
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4 Downloads (Pure)

Onderdrukking van Rhizoctonia solani in gangbare en biologische landbouwgronden

van Rijssel, S. Q., Meesters, K. C. E. P., van der Putten, W. H. & Veen, G. F., Mar 2019, In : Gewasbescherming. 50, 2, p. 52

Research output: Contribution to journal/periodicalArticlePopularizing

Open Access
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25 Downloads (Pure)

Onderzoekers geven input voor COP25-klimaattop

NIOO-KNAW, 11 Dec 2019, Nature Today.

Research output: Working paper/discussion paperWeb articlePopularizing

On the stability of sequences inserted into viral genomes

Willemsen, A. & Zwart, M. P., 2019, In : Virus Evolution. 5, 2, vez045.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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60 Downloads (Pure)

Opinion: 'Salary gap among PhD students is very unfair'

Petruzzella, A., 28 Mar 2019.

Research output: Working paper/discussion paperWeb articlePopularizing

Opportunities and limitations of reduced representation bisulfite sequencing in plant ecological epigenomics

Paun, O., Verhoeven, K. J. F. & Richards, C. L., Jan 2019, In : New Phytologist. 221, 2, p. 738-742

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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7 Downloads (Pure)

Organic amendment strengthens interkingdom associations in the soil and rhizosphere of barley (Hordeum vulgare)

Suleiman, A. K. A., Harkes, P., van den Elsen, S., Holterman, M., Korthals, G. W., Helder, J. & Kuramae, E. E., 2019, In : Science of the Total Environment. 133885.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

2 Downloads (Pure)

Pair coordination is related to later brood desertion in a provisioning songbird

Baldan, D. & Griggio, M., 2019, In : Animal Behaviour. 156, p. 147-152 6 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome

Carrión, V. J., Perez Jaramillo, J. E., Cordovez, V., Tracanna, V., De Hollander, M., Ruiz Buck, D., Mendes, L. W., van IJcken, W. F. J., Gómez Expósito, R., Elsayed, S. S., Mohanraju, P., Arifah, A., van der Oost, J., Paulson, J. N., Mendes, R., van Wezel, G., Medema, M. H. & Raaijmakers, J. M., 2019, In : Science. 366, 6465, p. 606-612

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Pathogen suppression by microbial volatile organic compounds in soils

De Boer, W., Li, X. G., Meisner, A. & Garbeva, P. V., 2019, In : FEMS Microbiology Ecology. 95, 8, fiz105.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

4 Downloads (Pure)

Patterns of differentiation in the life history and demography of four recently described species of the Brachionus calyciflorus cryptic species complex

Zhang, W., Lemmen, K. D., Zhou, L., Papakostas, S. & Declerck, S. A. J., 2019, In : Freshwater Biology. 64, 11, p. 1994-2005

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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43 Downloads (Pure)

PCLake +: a process-based ecological model to assess the trophic state of stratified and non-stratified freshwater lakes worldwide

Janssen, A. B. G., Teurlincx, S., Beusen, A. HW., Huijbregts, M. A. J., Rost, J., Schipper, A., Seelen, L., Mooij, W. M. & Janse, J. H., 2019, In : Ecological Modelling. 396, March, p. 23-32

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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165 Downloads (Pure)

Peat substrate amended with chitin modulates the N-cycle, siderophore and chitinase responses in the lettuce rhizobiome

de Tender, C., Mesuere, B., van der Jeugt, F., Haegeman, A., Ruttink, T., Vandecasteele, B., Dawyndt, P., Debode, J. & Kuramae, E. E., 09 Jul 2019, In : Scientific Reports. 9

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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54 Downloads (Pure)

Personality and gonadal development as sources of individual variation in response to GnRH challenge in female great tits

Caro, S. P., Cornil, C. A., van Oers, K. & Visser, M. E., 15 May 2019, In : Proceedings of the Royal Society B-Biological Sciences. 286, 1902, 20190142.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Personality types vary in their personal and social information use

Smit, J. A. H. & van Oers, K., 2019, In : Animal Behaviour. Online, p. 185-193

Research output: Contribution to journal/periodicalArticleScientificpeer-review

1 Downloads (Pure)

Persoonlijkheid en koolmezen: Beleef de Lente

Sepers, B., 13 Mar 2019.

Research output: Working paper/discussion paperWeb articlePopularizing

Open Access

Phenological mismatch drives selection elevation, but not on slope, of breeding time plasticity in a wild songbird

Ramakers, J. J. C., Gienapp, P. & Visser, M. E., 2019, In : Evolution. 73, 2, p. 175-187

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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850 Downloads (Pure)

Phosphate fertilization on nutritional status and growth of upland rice cultivars

Crusciol, C. A. C., Momesso, L. & Nascimento, C. A. C., 09 Aug 2019, In : Journal of Plant Nutrition. 42, 13, p. 1516-1528 13 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

1 Downloads (Pure)

Phylogenomic analyses and distribution of terpene synthases among Streptomyces

Martín-Sánchez, L., Saurabh Singh, K., Avalos Garcia, M., van Wezel, G. P., Dickschat, J. S. & Garbeva, P. V., 2019, In : Beilstein Journal of Organic Chemistry. 15, p. 1181–1193

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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140 Downloads (Pure)

Phytoplankton growth and stoichiometric responses to warming, nutrient addition and grazing depend on lake productivity and cell size

Schulhof, M. A., Shurin, J. B., Declerck, S. A. J. & Van de Waal, D. B., 2019, In : Global Change Biology. p. 2751-2762

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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59 Downloads (Pure)

Plant diversity enhances the natural attenuation of polycyclic aromatic compounds (PAHs and oxygenated PAHs) in grassland soils

Bandowe, B. A. M., Leimer, S., Meusel, H., Velescu, A., Dassen, S., Eisenhauer, N., Hoffmann, T., Oelmann, Y. & Wilcke, W., Feb 2019, In : Soil Biology & Biochemistry. 129, p. 60-70

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Plant functional diversity and nutrient availability can improve restoration of floating fens via facilitation, complementarity and selection effects

van Zuidam, J. P., van Leeuwen, C., Bakker, E. S., Verhoeven, J. T. A., Ijff, S., Peeters, E. T. H. M., van Zuidam, B. G. & Soons, M. B., 2019, In : Journal of Applied Ecology. 56, 1, p. 235-245

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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112 Downloads (Pure)

Plant functional trait identity and diversity effects on soil meso- and macrofauna in an experimental grassland

Beugnon, R., Steinauer, K., Barnes, A. D., Ebeling, A., Roscher, C. & Eisenhauer, N., 2019, Mechanisms underlying the relationship between biodiversity and ecosystem function. Eisenhauer, N., Bohan, D. A. & Dumbrell, A. J. (eds.). Vol. 61. p. 163-184 (Advances in Ecological Research).

Research output: Chapter in book/volumeChapterScientificpeer-review

1 Downloads (Pure)

Plant presence reduces root and shoot litter decomposition rates of crops and wild relatives

Barel, J. M., Kuyper, T. W., de Boer, W. & De Deyn, G. B., 2019, In : Plant and Soil. 438, 1, p. 313-327 15 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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43 Downloads (Pure)

Plastic: van zegen tot vloek

van Everdingen, J. (ed.), van Donk, E. (ed.), Poolen, D. (ed.) & Buiter, R. (ed.), 2019, Stichting Biowetenschappen en Maatschappij. 78 p. (Cahiers Biowetenschappen en Maatschappij; vol. 38, no. 2)

Research output: Book/ReportBookPopularizing

Open Access

Pollination contribution to crop yield is often context-dependent: A review of experimental evidence

Tamburini, G., Bommarco, R., Kleijn, D., van der Putten, W. H. & Marini, L., 2019, In : Agriculture, Ecosystems and Environment. 280, p. 16-23 8 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Polyphasic classification of the gifted natural product producer Streptomyces roseifaciens sp. nov.

van der Aart, L. T., Nouioui, I., Kloosterman, A., Igual, J-M., Willemse, J., Goodfellow, M. & van Wezel, G. P., 2019, In : International Journal of Systematic and Evolutionary Microbiology. 69, 4, p. 899-908 10 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

poreTally: run and publish de novo nanopore assembler benchmarks

de Lannoy, C., Risse, J. & de Ridder, D., 2019, In : Bioinformatics. 35, 15, p. 2663-2664 2 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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34 Downloads (Pure)

Post-breeding movements of Pink-footed Geese on Svalbard: two routes with different causes and consequences

Schreven, K. H. T., Madsen, J. & Nolet, B. A., 26 Mar 2019.

Research output: Contribution to conferencePosterScientific

Protist communities are more sensitive to nitrogen fertilization than other microorganisms in diverse agricultural soils

Zhao, Z-B., He, J-Z., Geisen, S., Han, L-L., Wang, J-T., Shen, J-P., Wei, W-X., Fang, Y-T., Li, P-P. & Zhang, L-M., 2019, In : Microbiome. 7, 1

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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80 Downloads (Pure)

Protists: Puppet Masters of the Rhizosphere Microbiome

Gao, Z., Karlsson, I., Geisen, S., Kowalchuk, G. & Jousset, A., Feb 2019, In : Trends in Plant Science. 24, 2, p. 165-176

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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53 Downloads (Pure)