1. Article › Scientific › Not peer-reviewed
  2. Acidicapsa borealis gen. nov., sp. nov. and Acidicapsa ligni sp. nov., subdivision 1 Acidobacteria from Sphagnum peat and decaying wood

    Kulichevskaya, I. S., Kostina, L. A., Valášková, V., Rijpstra, I. C., Sinninghe Damsté, J. S., De Boer, W. & Dedysh, S. N., 2012, In : International Journal of Systematic and Evolutionary Microbiology. 62, PT_7, p. 1512-1520

    Research output: Contribution to journal/periodicalArticleScientific

  3. Article › Scientific › Peer-reviewed
  4. Accurate quantification of microorganisms in PCR-inhibiting environmental DNA extracts by a novel Internal Amplification Control approach using Biotrove OpenArrays

    Van Doorn, R., Klerks, M., van Gent-Pelzer, M., Speksnijder, A. G. C. L., Kowalchuk, G. A. & Schoen, C. D., 2009, In : Applied and Environmental Microbiology. 75, 22, p. 7253-7260

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  5. Acidobacterial community responses to agricultural management of soybean in Amazon forest soils

    Navarrete, A. A., Kuramae, E. E., De Hollander, M., Pijl, A. S., Van Veen, J. A. & Tsai, S. M., 2013, In : FEMS Microbiology Ecology. 83, 3, p. 607-621

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  6. A comparative study of the use of inorganic carbon resources by Chara aspera and Potamogeton pectinatus

    Van den Berg, M., Coops, H., Simons, J. & Pilon, J., 2002, In : Aquatic Botany. 72, 3-4, p. 219-233

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  7. A comparison of rpoB and 16S rRNA as markers in pyrosequencing studies of bacterial diversity

    Vos, M., Quince, C., Pijl, A. S., De Hollander, M. & Kowalchuk, G. A., 2012, In : PLoS One. 7, 2, e30600.

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  8. Ammonia-oxidizing bacteria: A model for molecular microbial ecology

    Kowalchuk, G. A. & Stephen, J. R., 2001, In : Annual Review of Microbiology. 55, p. 485-529

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  9. Ammonium-induced inhibition of ammonium-starved Nitrosomonas europaea cells in soil and sand slurries

    Gerards, S., Duyts, H. & Laanbroek, H. J., 1998, In : FEMS Microbiology Ecology. 26, 4, p. 269-280

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  10. Ammonium-Oxidation at Low Ph by a Chemolithotrophic Bacterium Belonging to the Genus Nitrosospira

    De Boer, W., Klein Gunnewiek, P. J. A. & Laanbroek, H. J., 1995, In : Soil Biology & Biochemistry. 27, 2, p. 127-132

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  11. A molecular biological protocol to distinguish potentially human pathogenic Stenotrophomonas maltophilia from plant-associated Stenotrophomonas rhizophila

    Ribbeck-Busch, K., Roder, A., Hasse, D., De Boer, W., Martinez, J. L., Hagemann, M. & Berg, G., 2005, In : Environmental Microbiology. 7, 11, p. 1853-1858

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  12. Analysis of ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified 16S ribosomal DNA fragments

    Kowalchuk, G. A., Stephen, J. R., De Boer, W., Prosser, J. I., Embley, T. M. & Woldendorp, J. W., 1997, In : Applied and Environmental Microbiology. 63, 4, p. 1489-1497

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  13. Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA

    Duineveld, B. M., Kowalchuk, G. A., Keijzer, A., Van Elsas, J. D. & Van Veen, J. A., 2001, In : Applied and Environmental Microbiology. 67, 1, p. 172-178

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  14. Analysis of ß-subgroup proteobacterial ammonia oxidizer populations in soil by denaturing gradient gel electrophoresis analysis and hierarchical phylogenetic probing

    Stephen, J. R., Kowalchuk, G. A., Bruns, M. A., McCaig, A. E., Phillips, C. B., Embley, T. M. & Prosser, J. I., 1998, In : Applied and Environmental Microbiology. 64, 8, p. 2958-2965

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  15. Analysis of the dynamics of bacterial communities in the rhizosphere of the Chrysanthemum via denaturing gradient gel eletrophoresis and substrate utilization patterns

    Duineveld, B. M., Rosado, A. S., Van Elsas, J. D. & Van Veen, J. A., 1998, In : Applied and Environmental Microbiology. 64, p. 4950-4957

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  16. An EST-based analysis identifies new genes and reveals distinctive gene expression features of Coffea arabica and Coffea canephora

    Mondego, J. M. C., Vidal, R. O., Carazzolle, M. F., Tokuda, E. K., Parizzi, L. P., Costa, G. G. L., Pereira, L. F. P., Andrade, A. C., Colombo, C. A., Vieira, L. G. E., Pereira, G. A. G. & Kuramae, E. E., 2011, In : BMC Plant Biology. 11, p. 30

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  17. Anti-fungal properties of chitinolytic dune soil bacteria

    De Boer, W., Klein Gunnewiek, P. J. A., Lafeber, P., Janse, J. H., Spit, B. E. & Woldendorp, J. W., 1998, In : Soil Biology & Biochemistry. 30, 2, p. 193-203

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  18. A PCR-denaturing gradient gel electrophoresis (DGGE) approach to assess Fusarium diversity in asparagus

    Yergeau, E., Filion, M., Vujanovic, V. & St-Arnaud, M., 2005, In : Journal of Microbiological Methods. 60, 2, p. 143-154

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  19. Arbuscular mycorrhizal fungi reveal distinct patterns of anastomosis formation and hyphal healing mechanisms between different phylogenic groups

    De Souza, F. A., Fernández, F., Delmas, N. S. & Declerck, S., 2005, In : New Phytologist. 165, 1, p. 261-271

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  20. Assessing response of soil microorganisms to GM plants

    Kowalchuk, G. A., Bruinsma, M. & Van Veen, J. A., 2003, In : Trends in Ecology & Evolution. 18, 8, p. 403-410

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  21. Assessment of the diversity, and antagonism towards Rhizoctonia solani AG3, of Pseudomonas species in soil from different agricultural regimes

    Garbeva, P. V., Van Veen, J. A. & van Elsas, J. D., 2004, In : FEMS Microbiology Ecology. 47, 1, p. 51-64

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

  22. A survey of 16S rRNA and amoA genes related to autotrophic ammonia-oxidizing bacteria of the ß-subdivision of the class proteobacteria in contaminated groundwater

    Ivanova, I. A., Stephen, J. R., Chang, Y. J., Bruggemann, J., Long, P. E., McKinley, J. P., Kowalchuk, G. A., White, D. C. & MacNaughton, S. J., 2000, In : Canadian Journal of Microbiology. 46, 11, p. 1012-1020

    Research output: Contribution to journal/periodicalArticleScientificpeer-review

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