NIOO - Microbial Ecology (ME)

Search results

• Data from: Soil warming and fertilization altered rates of nitrogen transformation processes and selected for adapted ammonia-oxidizing archaea in sub-arctic grassland soil

  Daebeler, A. (Creator), Marine Data Archive, 09 Jan 2017

  http://mda.vliz.be/mda/directlink.php?fid=VLIZ_00000353_587355830e0cd

  Dataset

• interkingdom relationships in the soil and rhizosphere

  Suleiman, A. (Creator), Harkes, P. (Creator), van den Elsen, S. (Creator), Holterman, M. (Creator), Korthals, G. (Creator), Helder, J. (Creator) & Kuramae, E. (Creator), European Nucleotide Archive (ENA), 30 Sep 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB31292

  Dataset

• Data from: Unexpected role of canonical aerobic methanotrophs in upland agricultural soils.

  Ho, A. (Creator), Lee, H. J. (Creator), Reumer, M. (Creator), Meima-Franke, M. (Creator), Raaijmakers, C. (Creator), Zweers, H. (Creator), de Boer, W. (Creator), van der Putten, W. H. (Creator) & Bodelier, P. (Creator), Marine Data Archive, 06 Jan 2021

  https://mda.vliz.be/directlink.php?fid=VLIZ_00000369_5ff5b87fd699f786417759

  Dataset

• Lettuce rhizosphere sequencing

  Cipriano, M. (Creator), Lupatini, M. (Creator), Santos, L. (Creator), Silva, M. D. (Creator), Roesch, L. F. W. (Creator), Destefano, S. (Creator), Freitas, S. (Creator) & Kuramae, E. (Creator), European Nucleotide Archive (ENA), 25 Apr 2016

  https://www.ebi.ac.uk/ena/data/view/PRJEB12505

  Dataset

• Data from: Exploring the reservoir of potential fungal plant pathogens in agricultural soil

  Van Agtmaal, M. (Creator), Straathof, A. L. (Creator), Termorshuizen, A. J. (Creator), Teurlincx, S. (Creator), Hundscheid, M. P. J. (Creator), Ruyters, S. (Creator), Busschaert, P. (Creator), Lievens, B. (Creator) & de Boer, W. (Creator), Marine Data Archive, 01 Nov 2017

  http://mda.vliz.be/mda/directlink.php?fid=VLIZ_00000444_59d74b98c5ac3

  Dataset

• Involvement of Burkholderiaceae and sulfurous volatiles in disease suppressive soils

  Carrion Bravo, V. (Creator), Zenodo, 31 Jan 2018

  DOI: 10.5281/zenodo.1163754

  Dataset

• Data from: Unexpected stimulation of soil methane uptake as emergent property of agricultural soils following bio-based residue application

  Ho, A. (Creator), Marine Data Archive, 01 Jul 2016

  http://mda.vliz.be/mda/directlink.php?fid=VLIZ_00000369_5776210950aa9

  Dataset

• Rhizomicrobiome structure of sorghum genotypes over plant growth stages in different soils

  Schlemper, T. R. (Creator), Fernandes Alves Leite, M. (Creator), Lucheta, A. (Creator), Shimels, M. (Creator), Bouwmeester, H. J. (Creator), van Veen, H. (Creator) & Kuramae, E. (Creator), European Nucleotide Archive (ENA), 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB21895

  Dataset

• Here is the sequence that are generated from cross dilution design study. All samples were sequenced by 16S rRNA gene sequence.

  Yan, Y. (Creator), Klinkhamer, P. G. L. (Creator), van Veen, H. (Creator) & Kuramae, E. (Creator), European Nucleotide Archive (ENA), 27 Feb 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB31454

  Dataset

• Data from: The impact of tropical forest logging and oil palm agriculture on the soil microbiome[dryad[

  Tripathi, B. M. (Creator), Edwards, D. P. (Creator), Mendes, L. W. (Creator), Kim, M. (Creator), Dong, K. (Creator), Kim, H. (Creator) & Adams, J. M. (Creator), Dryad, 17 Mar 2016

  DOI: http://dx.doi.org/10.5061/dryad.17n4d

  Dataset

• Effect of logging on soil microbial community in tropics[MG-RAST]

  Tripathi, B. M. (Creator), Edwards, D. P. (Creator), Mendes, L. W. (Creator), Kim, M. (Creator), Dong, K. (Creator) & Adams, J. M. (Creator), MG-RAST, 27 Apr 2013

  http://metagenomics.anl.gov/metagenomics.cgi?page=MetagenomeProject&project=10865

  Dataset

• Coral Targeted loci environmental

  Rosado, P. M. (Creator), Leite, D. C. A. (Creator), Duarte, G. A. S. (Creator), Chaloub, R. M. (Creator), Jospin, G. (Creator), Nunes da Rocha, U. (Creator), P. Saraiva, J. (Creator), Dini-Andreote, F. (Creator), Eisen, J. A. (Creator), Bourne, D. G. (Creator) & Peixoto, R. S. (Creator), NCBI, 26 Feb 2018

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA436030

  Dataset

• SOIL MICROBIAL COMMUNITY RESISTANCE TO NPK FERTILIZATION AND RESILIANCE TO FERTILIZATION WITH DICYANDIAMIDE-TREATED SWINE SLURRY

  Suleiman, A. K. A. (Creator), Lupatini, M. (Creator) & Kuramae, E. (Creator), NCBI, 01 Oct 2015

  https://www.ncbi.nlm.nih.gov/sra/SRX1294673/

  Dataset

• Data from: Potential of sulfate reduction in mangrove forest soils: Comparison between two dominant species of the Americas

  Balk, M. (Creator), Keuskamp, J. (Creator) & Laanbroek, (. H. J. (Creator), Marine Data Archive, 2016

  http://mda.vliz.be/mda/directlink.php?fid=VLIZ_00000444_583ea66575aad

  Dataset

• bacterium enrichment culture strain:Several strains | breed:Prokaryotic

  Paulo, A. M. S. (Creator), Aydin, R. (Creator), Dimitrov, M. (Creator), Vreeling, H. (Creator), Cavaleiro, A. J. (Creator), García-Encina, P. A. (Creator), Stams, A. J. M. (Creator) & Plugge, C. M. (Creator), NCBI, 27 Jun 2016

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA326920

  Dataset

• Uncultured fungus glycosyl hydrolase 15-like (GH15) gene, partial sequence.

  Hannula, E. (Creator) & van Veen, H. (Creator), NCBI, 06 Oct 2015

  https://www.ncbi.nlm.nih.gov/popset/932250321

  Dataset

• Uncultured fungus glycosyl hydrolase 18-like (GH18) gene, partial sequence.

  Hannula, E. (Creator) & van Veen, H. (Creator), NCBI, 06 Oct 2015

  https://www.ncbi.nlm.nih.gov/popset/932250333

  Dataset

• Uncultured fungus glucose oxidase-like (GO) gene, partial sequence.

  Hannula, E. (Creator) & van Veen, H. (Creator), NCBI, 06 Oct 2015

  https://www.ncbi.nlm.nih.gov/popset/932250418

  Dataset

• Uncultured fungus CBH-like (CBH) gene, partial sequence.

  Hannula, E. (Creator) & van Veen, H. (Creator), NCBI, 06 Oct 2015

  https://www.ncbi.nlm.nih.gov/popset/932250124

  Dataset

• Drought legacy effects on composition of soil fungal and prokaryote communities

  Meisner, A. (Creator), Samuel, J. (Creator), Snoek, B. (Creator), ten Hooven, F. (Creator) & van der Putten, W. H. (Creator), European Nucleotide Archive (ENA), 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB23318

  Dataset

• Uncultured fungus nitrate reductase 12R-like (NIAD12R) gene, partial sequence.

  Hannula, E. (Creator) & van Veen, H. (Creator), NCBI, 06 Oct 2015

  https://www.ncbi.nlm.nih.gov/popset/932250780

  Dataset

• Uncultured fungus oxalate decarboxylase-like (OD) gene, partial sequence.

  Hannula, E. (Creator) & van Veen, H. (Creator), NCBI, 06 Oct 2015

  https://www.ncbi.nlm.nih.gov/popset/932250795

  Dataset

• Soil microbial response to organic disturbances

  Lourenço, K. (Creator), Suleiman, A. (Creator), Pijl, A. (Creator), Cantarella, H. (Creator) & Kuramae, E. (Creator), European Nucleotide Archive (ENA), 22 Aug 2018

  https://www.ebi.ac.uk/ena/data/view/PRJEB25676

  Dataset

• Non corroding sheet piles in the soil.

  Kip, D. J. (Creator), Fernandes Alves Leite, M. (Creator), De Hollander, M. (Creator), Kuramae, E. (Creator) & van Veen, H. (Creator), European Nucleotide Archive (ENA), 05 Nov 2016

  https://www.ebi.ac.uk/ena/data/view/PRJEB9787

  Dataset

• Transcriptome sequencing of Arabidopsis exposed to volatiles from Microbacterium sp. strain EC8

  Cordovez da Cunha, V. (Creator), Schop, S. (Creator), Hordijk, C. A. (Creator), Dupré de Boulois, H. (Creator), Coppens, F. (Creator), Hanssen, I. (Creator), Raaijmakers, J. M. (Creator) & Carrion Bravo, V. (Creator), NCBI, 24 Sep 2018

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA492842

  Dataset