NIOO - Microbial Ecology (ME)

Search results

• Uncultured fungus glycosyl hydrolase 76-like (GH76) gene, partial sequence.

  Hannula, S. E. (Creator) & van Veen, J. A. (Creator), NCBI, 06 Oct 2015

  https://www.ncbi.nlm.nih.gov/popset/932250396

  Dataset

• Data from: Nitrate ammonification in mangrove soils: A hidden source of nitrite?

  Laanbroek, H. J. (Creator), Marine Data Archive, 21 Oct 2016

  http://mda.vliz.be/mda/directlink.php?fid=VLIZ_00000444_580a20df1a418

  Dataset

• Data from: Potential of sulfate reduction in mangrove forest soils: Comparison between two dominant species of the Americas

  Balk, M. (Creator), Keuskamp, J. (Creator) & Laanbroek, H. J. (Creator), Marine Data Archive, 2016

  http://mda.vliz.be/mda/directlink.php?fid=VLIZ_00000444_583ea66575aad

  Dataset

• Data from: Combined effects of carbon, nitrogen and phosphorus on CH4 production and denitrification in wetland sediments

  Kim, S. Y. (Creator) & Bodelier, P. (Creator), Marine Data Archive, 18 Mar 2015

  http://mda.vliz.be/mda/directlink.php?fid=VLIZ_00000369_1426690130

  Dataset

• Ammonia-limited conditions cause of Thaumarchaeal dominance in volcanic grassland soil

  Daebeler, A. (Creator), Bodelier, P. (Creator), Hefting, M. M. (Creator) & Laanbroek, H. J. (Creator), Marine Data Archive, 23 May 2014

  DOI: http://mda.vliz.be/mda/directlink.php?fid=VLIZ_00000353_1400848687

  Dataset

• data from: Decomposing cover crops modify root-associated microbiome composition and disease tolerance of cash crop seedlings

  Liu, X. (Creator), Hannula, E. (Creator), Li, X. (Creator), Hundscheid, M. P. J. (Creator), Klein Gunnewiek, P. J. A. (Creator), Clocchiatti, A. (Creator), Ding, W. (Creator) & de Boer, W. (Creator), Dryad, 15 Apr 2022

  DOI: http://doi.org/10.5061/dryad.0k6djhb29

  Dataset

• Data from: Hysteresis in an experimental phytoplankton population

  Faassen, E. J. (Creator), Veraart, A. J. (Creator), Van Nes, E. H. (Creator), Dakos, V. (Creator), Lürling, M. (Creator) & Scheffer, M. (Creator), Dryad, 23 Mar 2015

  DOI: http://dx.doi.org/10.5061/dryad.8gr58

  Dataset

• The hidden potential of saprotrophic fungi in arable soil: patterns of short-term stimulation by organic amendments

  Clocchiatti, A. (Creator), Hannula, E. (Creator), Van den Berg, M. (Creator), Korthals, G. (Creator) & de Boer, W. (Creator), European Nucleotide Archive (ENA), 24 Nov 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB33534

  Dataset

• Enrichment of mycophagous bacteria

  Ballhausen, M. (Creator), van Veen, J. A. (Creator), Hundscheid, M. P. J. (Creator) & de Boer, W. (Creator), European Nucleotide Archive (ENA), 2014

  https://www.ebi.ac.uk/ena/data/view/LM652338 and 35 more links, https://www.ebi.ac.uk/ena/data/view/LM652339, https://www.ebi.ac.uk/ena/data/view/LM652340, https://www.ebi.ac.uk/ena/data/view/LM652341, https://www.ebi.ac.uk/ena/data/view/LM652342, https://www.ebi.ac.uk/ena/data/view/LM652343, https://www.ebi.ac.uk/ena/data/view/LM652344, https://www.ebi.ac.uk/ena/data/view/LM652345, https://www.ebi.ac.uk/ena/data/view/LM652346, https://www.ebi.ac.uk/ena/data/view/LM652347, https://www.ebi.ac.uk/ena/data/view/LM652348, https://www.ebi.ac.uk/ena/data/view/LM652349, https://www.ebi.ac.uk/ena/data/view/LM652350, https://www.ebi.ac.uk/ena/data/view/LM652351, https://www.ebi.ac.uk/ena/data/view/LM652352, https://www.ebi.ac.uk/ena/data/view/LM652353, https://www.ebi.ac.uk/ena/data/view/LM652354, https://www.ebi.ac.uk/ena/data/view/LM652355, https://www.ebi.ac.uk/ena/data/view/LM652356, https://www.ebi.ac.uk/ena/data/view/LM652357, https://www.ebi.ac.uk/ena/data/view/LM652358, https://www.ebi.ac.uk/ena/data/view/LM652359, https://www.ebi.ac.uk/ena/data/view/LM652360, https://www.ebi.ac.uk/ena/data/view/LM652361, https://www.ebi.ac.uk/ena/data/view/LM652362, https://www.ebi.ac.uk/ena/data/view/LM652363, https://www.ebi.ac.uk/ena/data/view/LM652364, https://www.ebi.ac.uk/ena/data/view/LM652365, https://www.ebi.ac.uk/ena/data/view/LM652366, https://www.ebi.ac.uk/ena/data/view/LM652367, https://www.ebi.ac.uk/ena/data/view/LM652368, https://www.ebi.ac.uk/ena/data/view/LM652369, https://www.ebi.ac.uk/ena/data/view/LM652370, https://www.ebi.ac.uk/ena/data/view/LM652371, https://www.ebi.ac.uk/ena/data/view/LM652372, https://www.ebi.ac.uk/ena/data/view/LM652373 (show fewer)

  Dataset

• Soil-wood interactions: influence of decaying logs on composition of soil fungal communities

  Van der Wal, A. (Creator), Klein Gunnewiek, P. J. A. (Creator) & de Boer, W. (Creator), European Nucleotide Archive (ENA), 30 Dec 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB20576

  Dataset

• IMIS metadata and citations

  Drost, S. (Creator) & Bodelier, P. (Creator), Marine Data Archive, 05 Nov 2021

  https://mda.vliz.be/directlink.php?fid=VLIZ_00000369_6185398bc0fa0568983464

  Dataset

• data from: Chicken gut microbiome members limit the spread of an antimicrobial resistance plasmid in Escherichia coli

  Duxbury, S. J. N. (Creator), Alderliesten, J. (Creator), Zwart, M. (Creator), Stegeman, A. (Creator), Fischer, E. A. J. (Creator) & de Visser, J. A. G. M. (Creator), Dryad, 27 Oct 2021

  DOI: 10.5061/dryad.2jm63xsp7

  Dataset

• data and code from: Robust Approaches to the Quantitative Analysis of Genome Formula Variation in Multipartite and Segmented Viruses

  Johnson, M. (Creator) & Zwart, M. (Creator), Zenodo, 14 Feb 2024

  DOI: 10.5281/zenodo.10355273

  Dataset

• Data from: Utilizing woody materials for fungal-based management of soil nitrogen pools

  Clocchiatti, A. (Creator), Hannula, E. (Creator), Hundscheid, M. P. J. (Creator), Klein Gunnewiek, P. J. A. (Creator) & de Boer, W. (Creator), Dryad, 05 Oct 2022

  DOI: 10.5061/dryad.0gb5mkm1q

  Dataset

• Data from: Evaluation of sequencing and PCR-based methods for the quantification of the viral genome formula

  Boezen, D. (Creator), Dryad, 31 Jan 2023

  DOI: 10.5061/dryad.b8gtht7gc

  Dataset

• Data from: Low abundant soil bacteria can be metabolically versatile and fast growing

  Kurm, V. (Creator), van der Putten, W. H. (Creator), de Boer, W. (Creator), Naus-Wiezer, S. M. H. (Creator) & Hol, W. H. G. (Creator), Dryad, 01 Dec 2016

  DOI: 10.5061/dryad.80724

  Dataset

• Sequences of the 16S and 18S gene and pH determination of the Jena Experiment main plots measured in 2010

  Dassen, S. (Creator), Cortois, R. (Creator), Martens, H. J. (Creator), De Hollander, M. (Creator), Kowalchuk, G. A. (Creator), van der Putten, W. H. (Creator) & De Deyn, G. B. (Creator), Pangaea, 2017

  DOI: 10.1594/PANGAEA.874990

  Dataset

• Data from: Microbial community dynamics during decomposition of insect exuviae and frass in soil

  Nurfikari, A. (Creator), Dryad, 19 Oct 2022

  DOI: 10.5061/dryad.rn8pk0pfk

  Dataset

• The effects of long-term experiment on bacterial community

  Lupatini, M. (Creator), European Nucleotide Archive (ENA), 31 Jan 2017

  http://www.ebi.ac.uk/ena/data/view/PRJEB10907

  Dataset

• Lettuce rhizosphere sequencing

  Cipriano, M. (Creator), Lupatini, M. (Creator), Santos, L. (Creator), Silva, M. D. (Creator), Roesch, L. F. W. (Creator), Destefano, S. (Creator), Freitas, S. (Creator) & Kuramae, E. (Creator), European Nucleotide Archive (ENA), 25 Apr 2016

  https://www.ebi.ac.uk/ena/data/view/PRJEB12505

  Dataset

• Microbial community of pine-wood

  Kielak, A. M. (Creator), Scheublin, T. R. (Creator), Mendes, L. W. (Creator), van Veen, H. (Creator) & Kuramae, E. (Creator), European Nucleotide Archive (ENA), 01 Nov 2016

  https://www.ebi.ac.uk/ena/data/view/PRJEB10643

  Dataset

• Name Amazon soil 16S rDNA amplicons 1

  Navarrete, A. A. (Creator), Tsai, S. M. (Creator), Mendes, L. W. (Creator), Faust, K. (Creator), De Hollander, M. (Creator), Cassman, N. (Creator), Raes, J. (Creator), van Veen, J. A. (Creator) & Kuramae, E. (Creator), European Nucleotide Archive (ENA), 26 Feb 2015

  https://www.ebi.ac.uk/ena/data/view/PRJEB8643

  Dataset

• interkingdom relationships in the soil and rhizosphere

  Suleiman, A. (Creator), Harkes, P. (Creator), van den Elsen, S. (Creator), Holterman, M. (Creator), Korthals, G. (Creator), Helder, J. (Creator) & Kuramae, E. (Creator), European Nucleotide Archive (ENA), 30 Sept 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB31292

  Dataset

• SOIL MICROBIAL COMMUNITY RESISTANCE TO NPK FERTILIZATION AND RESILIANCE TO FERTILIZATION WITH DICYANDIAMIDE-TREATED SWINE SLURRY

  Suleiman, A. K. A. (Creator), Lupatini, M. (Creator) & Kuramae, E. (Creator), NCBI, 01 Oct 2015

  https://www.ncbi.nlm.nih.gov/sra/SRX1294673/

  Dataset

• Ammonia-oxidizing bacterial communities in tropical soils under N and organic amendment

  Lourenço, K. (Creator), Cassman, N. (Creator), Pijl, A. (Creator), van Veen, J. A. (Creator), Cantarella, H. (Creator) & Kuramae, E. (Creator), European Nucleotide Archive (ENA), 2018

  https://www.ebi.ac.uk/ena/data/view/PRJEB25428

  Dataset