NIOO - Microbial Ecology (ME)

Search results

• Uncultured fungus nitrate reductase 12R-like (NIAD12R) gene, partial sequence.

  Hannula, S. E. (Creator) & van Veen, J. A. (Creator), NCBI, 06 Oct 2015

  https://www.ncbi.nlm.nih.gov/popset/932250780

  Dataset

• Uncultured fungus laccase-like (LAC) gene, partial sequence.

  Hannula, S. E. (Creator) & van Veen, J. A. (Creator), NCBI, 06 Oct 2015

  https://www.ncbi.nlm.nih.gov/popset/932250515

  Dataset

• Uncultured fungus CBH-like (CBH) gene, partial sequence.

  Hannula, S. E. (Creator) & van Veen, J. A. (Creator), NCBI, 06 Oct 2015

  https://www.ncbi.nlm.nih.gov/popset/932250124

  Dataset

• Pseudomonas fluorescens 16S ribosomal RNA gene, partial sequence.

  Liu, Y. (Creator), Rzeszutek, E. (Creator), van der Voort, M. (Creator), Wu, C. H. (Creator), Thoen, E. (Creator), Skaar, I. (Creator), Bulone, V. (Creator), Dorrestein, P. C. (Creator), Raaijmakers, J. M. (Creator) & De Bruijn, I. (Creator), NCBI, 09 Sept 2015

  https://www.ncbi.nlm.nih.gov/popset/925170675

  Dataset

• Uncultured fungus nitrate reductase-like (NIAD) gene, partial sequence.

  Hannula, S. E. (Creator) & van Veen, J. A. (Creator), NCBI, 06 Oct 2015

  https://www.ncbi.nlm.nih.gov/popset/932250645

  Dataset

• Uncultured fungus glycosyl hydrolase 15-like (GH15) gene, partial sequence.

  Hannula, S. E. (Creator) & van Veen, J. A. (Creator), NCBI, 06 Oct 2015

  https://www.ncbi.nlm.nih.gov/popset/932250321

  Dataset

• Pseudomonas 16S ribosomal RNA gene, partial sequence.

  Liu, Y. (Creator), Rzeszutek, E. (Creator), van der Voort, M. (Creator), Wu, C. H. (Creator), Thoen, E. (Creator), Skaar, I. (Creator), Bulone, V. (Creator), Dorrestein, P. C. (Creator), Raaijmakers, J. M. (Creator) & De Bruijn, I. (Creator), NCBI, 09 Sept 2015

  https://www.ncbi.nlm.nih.gov/popset/925170686

  Dataset

• Data from: Tide as steering factor in structuring archaeal and bacterial ammonia-oxidizing communities in mangrove forest soils dominated by Avicennia germinans and Rhizophora mangle

  Marcos, M. S. (Creator), Barboza, A. D. H. (Creator), Keijzer, R. (Creator) & Laanbroek, H. J. (Creator), Marine Data Archive, 01 Nov 2017

  http://mda.vliz.be/mda/directlink.php?fid=VLIZ_00000444_59f987644f5d0

  Dataset

• Data from: Organic residue amendments to modulate greenhouse gas emissions from agricultural soils

  Brenzinger, K. (Creator), Drost, S. M. (Creator), Korthals, G. W. (Creator) & Bodelier, P. (Creator), Marine Data Archive, 15 Jan 2019

  http://mda.vliz.be/directlink.php?fid=VLIZ_00000369_5c3dafd8189d0

  Dataset

• Transcriptome sequencing of Arabidopsis exposed to volatiles from Microbacterium sp. strain EC8

  Cordovez da Cunha, V. (Creator), Schop, S. (Creator), Hordijk, C. A. (Creator), Dupré de Boulois, H. (Creator), Coppens, F. (Creator), Hanssen, I. (Creator), Raaijmakers, J. M. (Creator) & Carrión, V. J. (Creator), NCBI, 24 Sept 2018

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA492842

  Dataset

• Uncultured fungus glycosyl hydrolase 10-like (GH10) gene, partial sequence.

  Hannula, S. E. (Creator) & van Veen, J. A. (Creator), NCBI, 06 Oct 2015

  https://www.ncbi.nlm.nih.gov/popset/932250195

  Dataset

• Fungal, bacterial & plant biomass data: Evaluation of phenolic root exudates as stimulants of saprotrophic fungi in the rhizosphere

  Clocchiatti, A. (Creator), Hannula, E. (Creator), Van den Berg, M. (Creator), Hundscheid, M. P. J. (Creator) & de Boer, W. (Creator), Dryad, 16 Mar 2021

  DOI: 10.5061/dryad.573n5tb6z

  Dataset

• Data from: Recurrence and frequency of disturbance have cumulative effect on methanotrophic activity, abundance, and community structure

  Ho, A. (Creator) & Bodelier, P. (Creator), Marine Data Archive, 29 Jun 2016

  http://mda.vliz.be/mda/directlink.php?fid=VLIZ_00000369_57721c5183b88

  Dataset

• Fungal diversity and niche differentiation in decaying logs and stumps

  Van der Wal, A. (Creator), Klein Gunnewiek, P. J. A. (Creator), De Hollander, M. (Creator) & de Boer, W. (Creator), European Nucleotide Archive (ENA), 28 Dec 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB18707

  Dataset

• Transcriptome sequencing of Arabidopsis exposed to fungal volatiles

  Cordovez da Cunha, V. (Creator), Moisan, K. (Creator), Carrion, V. J. (Creator) & Raaijmakers, J. M. (Creator), NCBI, 03 Jul 2017

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA392864

  Dataset

• LAESI-MSI Data Analysis for Untargeted Root Metabolomics

  Kulkarni, P. (Creator), Zenodo, 04 May 2018

  DOI: 10.5281/zenodo.1240844

  Dataset

• data from: Stimulated saprotrophic fungi in arable soil extend their activities to the rhizosphere and root microbiomes of crop seedlings

  Clocchiatti, A. (Creator), Hannula, E. (Creator), Hundscheid, M. P. J. (Creator), Klein Gunnewiek, P. J. A. (Creator) & de Boer, W. (Creator), European Nucleotide Archive (ENA), 08 Jun 2021

  https://www.ebi.ac.uk/ena/browser/view/PRJEB37482

  Dataset

• Data from: Fungal volatiles influence plant defence against aboveground and belowground herbivory

  Moisan, K. (Creator), Aragón, M. (Creator), Gort, G. (Creator), Dicke, M. (Creator), Cordovez da Cunha, V. (Creator), Raaijmakers, J. M. (Creator) & Lucas-Barbosa, D. (Creator), Dryad, 31 Jul 2020

  DOI: 10.5061/dryad.d2547d816

  Dataset

• Data from: Exploring the reservoir of potential fungal plant pathogens in agricultural soil

  Van Agtmaal, M. (Creator), Straathof, A. L. (Creator), Termorshuizen, A. J. (Creator), Teurlincx, S. (Creator), Hundscheid, M. P. J. (Creator), Ruyters, S. (Creator), Busschaert, P. (Creator), Lievens, B. (Creator) & de Boer, W. (Creator), Marine Data Archive, 01 Nov 2017

  http://mda.vliz.be/mda/directlink.php?fid=VLIZ_00000444_59d74b98c5ac3

  Dataset

• The hidden potential of saprotrophic fungi in arable soil: Patterns of short-term stimulation by organic amendments

  Clocchiatti, A. (Creator), Hannula, E. (Creator), Van den Berg, M. (Creator), Korthals, G. (Creator) & de Boer, W. (Creator), Dryad, 21 May 2021

  DOI: 10.5061/dryad.6djh9w11d

  Dataset

• Modeling multipartite virus evolution: the genome formula facilitates rapid adaptation to heterogeneous environments

  Zwart, M. (Creator) & Elena, S. F. (Creator), Dryad, 18 Mar 2020

  DOI: 10.5061/dryad.18931zcsw

  Dataset

• Liquid chromatography measurement obtained from the chitin extracts of insect exuviae

  Nurfikari, A. (Creator) & de Boer, W. (Creator), Dryad, 21 Dec 2021

  DOI: 10.5061/dryad.tb2rbp026

  Dataset

• Autographa californica multiple nucleopolyhedrovirus bacmid Raw sequence reads

  Boezen, D. (Creator) & Zwart, M. (Creator), European Nucleotide Archive (ENA), 22 Jan 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJNA798700

  Dataset

• metatranscriptome data from: Impact of the fungal pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root microbiome

  Mendes, L. W. (Creator), Raaijmakers, J. M. (Creator), De Hollander, M. (Creator), Sepo, E. (Creator), Gomez Exposito, R. (Creator), Chiorato, A. F. (Creator), Mendes, R. (Creator), Tsai, S. M. (Creator) & Carrion Bravo, V. (Creator), NCBI, 22 Nov 2022

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA904281

  Dataset

• metagenome data from: Impact of the fungal pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root microbiome

  Mendes, L. W. (Creator), Raaijmakers, J. M. (Creator), De Hollander, M. (Creator), Sepo, E. (Creator), Gomez Exposito, R. (Creator), Chiorato, A. F. (Creator), Mendes, R. (Creator), Tsai, S. M. (Creator) & Carrion Bravo, V. (Creator), NCBI, 22 Nov 2022

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA904562

  Dataset