Westerdijk Fungal Biodiversity Institute

Research output

Research output per year 1988 2008 2009 2010 2011 2012 2013 2014 2015 2016 2017 2018 2019 2020 2021 2023

• 2545 Article
• 168 Chapter
• 105 Paper
• 51 Software
• 186 More
  • 50 PhD thesis
  • 43 Book
  • 31 Book/Film/Article review
  • 19 Abstract
  • 13 Contribution to conference proceedings
  • 9 Poster
  • 8 Other contribution
  • 5 Special issue (editorship)
  • 2 Report
  • 1 Editorial (disabled)
  • 1 Database
  • 1 Digital or Visual Products
  • 1 Online paper
  • 1 Web article
  • 1 Working paper/Discussion paper

Research output per year

Research output per year

Search results

• Chapter

  Yeast biodiversity and culture collections

  Robert, V., Stalpers, J., Boekhout, T. & Tan, S., 2006, Biodiversity and ecophysiology of yeasts. Springer, p. 31-44 14 p.

  Research output: Chapter in book/volume › Chapter › Scientific › peer-review

• Yeasts

  2004, Introduction to Food- and Airborne Fungi. p. 270-278

  Research output: Chapter in book/volume › Chapter › Scientific › peer-review

• Yeasts as Distinct Life Forms of Fungi.

  Boekhout, T. & Kurtzman, C., 2017, Yeasts in Natural Ecosystems: Ecology . Yurkov, A., Lachance, A. & P. B. (eds.). Springer, p. 1-37 DOI 10.1007/978-3-319-62683-3

  Research output: Chapter in book/volume › Chapter › Scientific › peer-review

  • time 100%
  10 Citations (Scopus)

• Yeasts in Food. Beneficial and detrimental aspects.

  Boekhout, T., Robert, V. & Phaff, H., 2003, Yeasts in Food. Beneficial and detrimental aspects.. (Woodhead publications, Cambridge).

  Research output: Chapter in book/volume › Chapter › Scientific › peer-review

  • yeasts 100%
  • spoilage yeast 57%
  • food preservation 47%
  • food quality 38%
  • quality control 34%

• Zygoascus M.Th: Smith (1986)

  Robert, V. & Smith, M. T., 2011, Zygoascus M.Th: Smith (1986). Elsevier B.V., p. 931-936 6 p. (The Yeasts; vol. 2).

  Research output: Chapter in book/volume › Chapter › Scientific › peer-review

  • Zygoascus 100%
  • asci 67%
  • hyphae 52%
  • ubiquinones 43%
  • ascospores 40%
  2 Citations (Scopus)

• Zygoascus M.Th.Smith

  Robert, V. & Smith, M. T., 2011, The Yeasts, a taxonomic study, 5th ed. p. 931-936

  Research output: Chapter in book/volume › Chapter › Scientific

  2 Citations (Scopus)
• Contribution to conference proceedings

  Biodegradation of carbohydrates during the formation of Agaricus bisporus compost

  Patyshakuliyeva, A. & De Vries, R. P., 2011, Proceedings of the 7th International Conference on Mushroom Biology and Mushroom Products. Savoie, J-M., Foulongne-Oriol, M., Largeteau, M. & Barroso, G. (eds.). Paris: Institut National de la Recherche Agronomique (INRA), p. 202-207

  Research output: Chapter in book/volume › Contribution to conference proceedings › Scientific

  Open Access

  File
  149 Downloads (Pure)

• Botryosphaeriaceae diversity on Acacia koa and A. heterophylla in Reunion and Hawaiian Islands

  Jami, F., Marincowitz, S., Crous, P. W., Slippers, B., Le Roux, J. J., Richardson, D. M. & Wingfield, M. J., Oct 2018, ICPP2018 Abstracts of Poster Presentations . 10 ed. Vol. 108. p. S1.93 (Phytopathology).

  Research output: Chapter in book/volume › Contribution to conference proceedings › Scientific › peer-review

  Open Access

• COI and ITS - DNA barcode comparison for Pythium species.

  Bala, K., Robideau, G. P., de Cock, A. W. A. M., Desaulniers, N. & Lévesque, C. A., 2008, COI and ITS - DNA barcode comparison for Pythium species.. Canadian Barcode of Life Network, 2nd Scientific Symposium.

  Research output: Chapter in book/volume › Contribution to conference proceedings › Scientific

• Constructing level-2 phylogenetic networks from triplets.

  van Iersel, L., Keijsper, J., Kelk, S., Stougie, L., Hagen, F. & Boekhout, T., 2008, Proceedings of the 12th annual International Conference on Research in Computational Molecular Biology. p. 450-462

  Research output: Chapter in book/volume › Contribution to conference proceedings › Scientific

  21 Citations (Scopus)

• Diversity of Botryosphaeriaceae on Proteaceae in South Africa, Australia and Portugal

  Jami, F., Migliorini, D., Burgess, T. I., Slippers, B., Crous, P. W. & Wingfield, M. J., Oct 2018, ICPP2018 Abstracts of Poster Presentations . 10 ed. Vol. 108. p. S1.93 1 p. (Phytopathology).

  Research output: Chapter in book/volume › Contribution to conference proceedings › Scientific › peer-review

  Open Access

  • Botryosphaeriaceae 100%
  • Proteaceae 88%
  • Portugal 68%
  • South Africa 56%
  • Botryosphaeria stevensii 22%

• Diversity of heat resistant moulds in food and beverages.

  Houbraken, J., Varga, J., Dijksterhuis, J. & Samson, R. A., 2008, Diversity of heat resistant moulds in food and beverages. - MIP-44.

  Research output: Chapter in book/volume › Contribution to conference proceedings › Scientific

• Exploring Sequence Alignment Algorithms on FPGA-based Heterogeneous Architectures

  Chang, X., Escobar, F. A., Valderrama, C. & Robert, V., 2014, Proceedings IWBBIO 2014: International Work-Conference on Bioinformatics and Biomedical Engineering. Ortuno, F. & Rojas, I. (eds.). Granada, Vol. 1&2. p. 330-341 12 p.

  Research output: Chapter in book/volume › Contribution to conference proceedings › Scientific › peer-review

• How (post-)genomic insights can provide new leads for improvements of mushroom cultivation

  Patyshakuliyeva, A., Post, H., Zhou, M., Jurak, E., Heck, A., Hildén, K. S., Kabel, M., Mäkelä, M. R., Altelaar, M. & de Vries, R. P., 2016, Science and Cultivation of Edible Fungi : Proceedings of the International Congress on the Science and Cultivation of Edible Fungi . International Society for Mushroom Science, Vol. 19 (part 1). p. 355-359 5 p. 74

  Research output: Chapter in book/volume › Contribution to conference proceedings › Scientific › peer-review

  • mushroom growing 100%
  • Agaricus bisporus 94%
  • phytomass 56%
  • mushrooms 55%
  • composts 55%

• Occurrence, molecular characterisation, and pathogenicity of Neoscytalidium dimidiatum on Citrus in Italy

  Polizzi, G., Aiello, D., Castello, I., Vitale, A., Groenewald, J. Z. & Crous, P. W., 2011, Proceedings of the International Symposium on Citrus Biotechnology. Gentile, A. & La Malfa, S. (eds.). Leuven: ISHS, p. 237-243

  Research output: Chapter in book/volume › Contribution to conference proceedings › Scientific

  Open Access

  File

  • Neoscytalidium dimidiatum 100%
  • Citrus 51%
  • Italy 44%
  • pathogenicity 44%
  • ribosomal RNA 39%
  12 Citations (Scopus)

  500 Downloads (Pure)

• Plant polysaccharide degradation by fungi

  De Vries, R. P., Wiebenga, A., Coutinho, P. M. & Henrissat, B., 2011, Proceedings of the 7th International Conference on Mushroom Biology and Mushroom Products. Savoie, J-M., Foulongne-Oriol, M., Largeteau, M. & Barroso, G. (eds.). Paris: Institut National de la Recherche Agronomique (INRA), p. 16-23

  Research output: Chapter in book/volume › Contribution to conference proceedings › Scientific

  Open Access

  File
  225 Downloads (Pure)

• Polyphasic taxonomy of Penicillium subgenus Furcatum.

  Houbraken, J., Frisvad, J. C., Meijer, M. & Samson, R. A., 2008, Polyphasic taxonomy of Penicillium subgenus Furcatum. - MIP-32.

  Research output: Chapter in book/volume › Contribution to conference proceedings › Scientific

• Reliable diagnosis of mucormycosis by ITS barcoding of the Mucorales (Zygomycetes).

  Walther, G., Voigt, K. & de Hoog, G. S., 2008, Reliable diagnosis of mucormycosis by ITS barcoding of the Mucorales (Zygomycetes).. p. 45

  Research output: Chapter in book/volume › Contribution to conference proceedings › Scientific

• The Yeasts, a new online and updatable platform for yeast diversity

  Boekhout, T., Daniel, H. -M., Groenewald, M., Yurkov, A., Bai, F. -Y. & Robert, V., Jun 2018, Abstracts ISHAM 2018 - Supplement. Issue suppl_2 ed. Vol. 56. p. S153-S153 (Medical Mycology).

  Research output: Chapter in book/volume › Contribution to conference proceedings › Scientific › peer-review

  Open Access
• Database

  CBS yeasts database

  Robert, V., Groenewald, M., Epping, W., Boekhout, T., Smith, M., Poot, G. & Stalpers, J., 2008

  Research output: Non-textual form › Database › Scientific
• Digital or Visual Products

  Atlas of Clinical Fungi. 3rd ed.- cd-rom

  de Hoog, G. S., Guarro, J., Gene, J. & Figueras, M. J., 2009

  Research output: Non-textual form › Digital or Visual Products › Popularizing
• Editorial (disabled)

  Basidiomycete Genomics

  de Vries, R. P., Makela, M. R., Hilden, K. S. & Kamper, J., Mar 2018, In: Fungal Genetics and Biology. 112, p. 1-1

  Research output: Contribution to journal/periodical › Editorial (disabled)

  Open Access
• Online paper

  Histone extraction for mass spectrometry-based analysis of post-translational modifications in the fungal genus Aspergillus

  Collemare, J., 2021, protocols.io.

  Research output: Working paper/discussion paper › Online paper › Scientific

  Open Access
• Other contribution

  Abundant Small Protein ICARUS Inside the Cell Wall of Stress-Resistant Ascospores of Talaromyces macrosporus Suggests a Novel Mechanism of Constitutive Dormancy

  Dijksterhuis, J., Wyatt, T., Hanssen, M., Golovina, E., Hoekstra, F. & Lugones, L., Mar 2021

  Research output: Other contribution › Scientific

  Open Access
  3 Citations (Scopus)

• Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass

  Benocci, T., Aguilar-Pontes, M. V., Kun, R. S., Lubbers, R. J. M., Lail, K., Wang, M., Lipzen, A., Ng, V., Grigoriev, I. V., Seiboth, B., Daly, P. & de Vries, R. P., 09 Apr 2019

  Research output: Other contribution › Scientific

  Open Access
  9 Citations (Scopus)

• Exploring Sequence Alignment Algorithms on FPGA-based Heterogeneous Architectures

  Chang, X., Escobar, F. A., Valderrama, C. & Robert, V., 2014

  Research output: Other contribution › Scientific

• Identifying Conserved Generic Aspergillus spp. Co-Expressed Gene Modules Associated with Germination Using Cross-Platform and Cross-Species Transcriptomics

  Baltussen, T. J. H., Coolen, J. P. M., Verweij, P. E., Dijksterhuis, J. & Melchers, W. J. G., Apr 2021

  Research output: Other contribution › Scientific

  Open Access
  4 Citations (Scopus)

• MycoNews 2020: President’s message, news, reports, awards, personalia, book news, and correspondence

  Collemare, J., 31 Dec 2020

  Research output: Other contribution › Professional

• State of the World’s Plants and Fungi 2020

  Collemare, J., 2020

  Research output: Other contribution › Scientific

  Open Access

• Vanillic acid and methoxyhydroquinone production from guaiacyl units and related aromatic compounds using Aspergillus niger cell factories

  Lubbers, R. J. M., Dilokpimol, A., Nousiainen, P. A., Visser, J., Bruijnincx, P. C. A., de Vries, R. P. & Cioc, R. C., 03 Aug 2021

  Research output: Other contribution › Scientific

  Open Access
  8 Citations (Scopus)

• www.basidio.org: An Online Platform for the Classification, Identification and Nomenclature of Taxa within Basidiomycota

  Raghoonundon, B., Zhao, R-L., He, M-Q., Boekhout, T., Buyck, B., Cui, B-K., Davoodian, N., Geml, J., Kakishima, M., Li, T-H., McKenzie, E. H. C., Raspe, O., Vellinga, E. C., Verbeken, A., Vizzini, A. & Hyde, K. D., Sept 2021

  Research output: Other contribution › Scientific

  1 Citation (Scopus)
• Paper

  Additions and redispositions of Cercosporoid fungi from South Africa

  Crous, P. W. & Braun, U., 1995.

  Research output: Contribution to conference › Paper › Scientific

• A new genus of hyphomycetes to accommodate Phialophora parasitica

  Crous, P. W., Gams, W., Wingfield, M. J. & Wyk, P. S. V., 1996.

  Research output: Contribution to conference › Paper › Scientific

• A new Leptographium species with pigmented conidia

  Roux, J., Wingfield, M. J., Kemp, G. H. J. & Crous, P. W., 1995.

  Research output: Contribution to conference › Paper › Scientific

• A new species of Ophiostoma with a Leptographium anamorph from Japan

  Westhuizen, K. V. D., Wingfield, M. J., Yamaoka, Y., Kemp, G. H. J. & Crous, P. W., 1995.

  Research output: Contribution to conference › Paper › Scientific

• A new species of Ophiostoma with a Leptographium anamorph from Larch in Japan

  Westhuizen, K. V. D., Wingfield, M. J., Yamoaka, Y., Kemp, G. H. J. & Crous, P. W., 1995.

  Research output: Contribution to conference › Paper › Scientific

  21 Citations (Scopus)

• An index to plant pathogenic fungi occurring in South Africa

  Crous, P. W. & Phillips, A. J. L., 1994.

  Research output: Contribution to conference › Paper › Scientific

• An integrated list of plant pathogens in Africa

  Crous, P. W., 1994.

  Research output: Contribution to conference › Paper › Scientific

• A rapid technique to distinguish species of Cylindrocladium

  Crous, P. W., Korf, A. & Zyl, W. H. V., 1994.

  Research output: Contribution to conference › Paper › Scientific

• A re-evaluation of the genus Leptographium

  Jacobs, K., Wingfield, M. J. & Crous, P. W., 1998.

  Research output: Contribution to conference › Paper › Scientific

• A serious canker disease of Eucalyptus in South Africa caused by a new species of Coniothyrium

  Coutinho, T. A., Wingfield, M. J. & Crous, P. W., 1996.

  Research output: Contribution to conference › Paper › Scientific

  59 Citations (Scopus)

• A taxonomic reassessment of Phyllachora proteae, a leaf pathogen of Proteaceae

  Denman, S., Crous, P. W. & Wingfield, M. J., 1998.

  Research output: Contribution to conference › Paper › Scientific

• A wilt disease of Rhododendron bushes

  Botha, W. J. & Crous, P. W., 1990.

  Research output: Contribution to conference › Paper › Scientific

• Biodiversity of saprobic fungi occurring on Proteaceae in the Cape Floral Kingdom of South Africa

  Lee, S. & Crous, P. W., 2001.

  Research output: Contribution to conference › Paper › Scientific

• Biological Resource Collections and Biosecurity

  Stalpers, J. A., 2008.

  Research output: Contribution to conference › Paper › Scientific

• Biosystematic appraisal of Cercospora and similar fungi from South Africa

  Crous, P. W., 1994.

  Research output: Contribution to conference › Paper › Scientific

• Biotype characterization of Cylindrocladium strains with three-septate conidia and ovoid vesicles

  Janse, B. J. H., Crous, P. W., Victor, D., Marias, G. F. & Alfenas, A. C., 1993.

  Research output: Contribution to conference › Paper › Scientific

• Botryosphaeria dothidea as an endophyte in Protea magnifica: a comparison of commercially cultivated and naturally occurring plants

  Denman, S., Crous, P. W. & Wingfield, M. J., 2001.

  Research output: Contribution to conference › Paper › Scientific

• Cercosporoid fungi associated with the eyespot disease complex of graminicolous hosts

  Robbertse, B. R., Campbell, G. F., Janse, B. J. H. & Crous, P. W., 1994.

  Research output: Contribution to conference › Paper › Scientific

• Characterisation of Phomopsis viticola on vines in South Africa

  Mostert, L., Crous, P. W. & Kang, J-C., 2000.

  Research output: Contribution to conference › Paper › Scientific