Westerdijk Fungal Biodiversity Institute

Search results

  • 2023

    A multicentre external quality assessment: A first step to standardise PCR protocols for the diagnosis of histoplasmosis and coccidioidomycosis

    Wilmes, D., Hagen, F., Verissimo, C., Alanio, A., Rickerts, V. & Buitrago, M. J., 11 May 2023, (E-pub ahead of print) In: Mycoses.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    7 Citations (Scopus)

  • Aspergillus, Talaromyces, and Penicillium

    Chen, S. C. A., Meyer, W., Sorrell, T. C. & Halliday, C. L., 11 Aug 2023, Manual of Clinical Microbiology: Section VI. Mycology Fungi. Wiley Online Library, p. 1-32

    Research output: Chapter in book/volume › Chapter › Scientific › peer-review

  • Aspergillus Section Terrei and Antifungals: From Broth to Agar-Based Susceptibility Testing Methods

    Vahedi-Shahandashti, R., Hahn, L., Houbraken, J. & Lass-Flörl, C., Mar 2023, In: Journal of Fungi. 9, 3, 306.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    3 Citations (Scopus)

  • A surprising finding: The curious case of a tongue lesion misdiagnosed as paracoccidioidomycosis

    Gerrits van den Ende, B., Rodrigues, A. M., Hahn, R. C. & Hagen, F., 27 Mar 2023, In: Revista Iberoamericana de Micologia. 40, 1, p. 10-14 5 p.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access

  • A transformer architecture for retention time prediction in liquid chromatography mass spectrometry-based proteomics

    Pham, T. V., Nguyen, V. V., Vu, D., Henneman, A. A., Richardson, R. A., Piersma, S. R. & Jimenez, C. R., Apr 2023, In: Proteomics. 23, 7-8, p. e2200041

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    4 Citations (Scopus)

  • Calophoma clematidina causing leaf spot and wilt on Clematis plants in the Czech Republic

    Špetík, M., Eichmeier, A., Burgová, J., Groenewald, J. Z. & Crous, P. W., 14 Jun 2023, In: Plant Disease. 107, 6, p. 1952 1 p.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    1 Citation (Scopus)

  • Candida khanbhai sp. nov., a new clinically relevant yeast within the Candida haemulonii species complex

    de Jong, A. W., Al-Obaid, K., Mohd Tap, R., Gerrits van den Ende, B., Groenewald, M., Joseph, L., Ahmad, S. & Hagen, F., 03 Feb 2023, In: Medical Mycology. 61, 2

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    15 Citations (Scopus)

  • Candida parapsilosis isolates carrying mutations outside FKS1 hotspot regions confer high echinocandin tolerance and facilitate the development of echinocandin resistance

    Daneshnia, F., Arastehfar, A., Lombardi, L., Binder, U., Scheler, J., Vahedi Shahandashti, R., Hagen, F., Lass-Flörl, C., Mansour, M. K., Butler, G. & Perlin, D. S., Jul 2023, In: International Journal of Antimicrobial Agents. 62, 1, p. 106831

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    9 Citations (Scopus)

  • Comparative Genomics and Transcriptomics Analyses Reveal Divergent Plant Biomass-Degrading Strategies in Fungi

    Li, J., Wiebenga, A., Lipzen, A., Ng, V., Tejomurthula, S., Zhang, Y., Grigoriev, I. V., Peng, M. & de Vries, R. P., 18 Aug 2023, In: Journal of Fungi. 9, 8

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    7 Citations (Scopus)

  • Comparing genomic variant identification protocols for Candida auris

    Li, X., Muñoz, J. F., Gade, L., Argimon, S., Bougnoux, M-E., Bowers, J. R., Chow, N. A., Cuesta, I., Farrer, R. A., Maufrais, C., Monroy-Nieto, J., Pradhan, D., Uehling, J., Vu, D., Yeats, C. A., Aanensen, D. M., d'Enfert, C., Engelthaler, D. M., Eyre, D. W., Fisher, M. C., & 6 othersHagen, F., Meyer, W., Singh, G., Alastruey-Izquierdo, A., Litvintseva, A. P. & Cuomo, C. A., 13 Apr 2023, In: Microbial genomics. 9, 4

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    6 Citations (Scopus)

  • Compatible solutes determine the heat resistance of conidia

    Seekles, S. J., van den Brule, T., Punt, M., Dijksterhuis, J., Arentshorst, M., Ijadpanahsaravi, M., Roseboom, W., Meuken, G., Ongenae, V., Zwerus, J., Ohm, R. A., Kramer, G., Wösten, H. A. B., de Winde, J. H. & Ram, A. F. J., Dec 2023, In: Fungal Biology and Biotechnology. 10, 1, 21.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    4 Citations (Scopus)

  • Cylindromonium dirinariae sp. nov. (Ascomycota, Hypocreales), a new nectrioid lichenicolous species on Dirinaria applanata in Japan

    Ohmaki, A., Okane, I., Crous, P. W. & Verkley, G. J. M., Jun 2023, In: Fungal Systematics and Evolution. 11, p. 1-10 10 p.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    1 Citation (Scopus)

  • Dermatophytes and mammalian hair: aspects of the evolution of Arthrodermataceae

    Tang, C., Zhou, X., Guillot, J., Wibbelt, G., Deng, S., Kandemir, H., Gräser, Y., Feng, P., Kang, Y. & de Hoog, G. S., Nov 2023, In: Fungal Diversity.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    4 Citations (Scopus)

  • Detection and quantification of the histone code in the fungal genus Aspergillus

    Zhang, X., Noberini, R., Vai, A., Bonaldi, T., Seidl, M. F. & Collemare, J., Jun 2023, In: Fungal Genetics and Biology. 167, 103800.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    3 Citations (Scopus)

  • Development of a Multiplex qPCR Assay for Fast Detection and Differentiation of Paracoccidioidomycosis Agents

    Pinheiro, B. G., Pôssa, A. P., Ricci, G., Nishikaku, A. S., Hagen, F., Hahn, R. C., Camargo, Z. P. D. & Rodrigues, A. M., 15 Mar 2023, In: Journal of Fungi.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    2 Citations (Scopus)

  • Diversity of epiphytic and endophytic fungal communities associated with leaves of Ziziphus lotus (L.) Lam. from Algeria

    Ghazi-Yaker, A., Kraak, B., Houbraken, J., Houali, K. & Saadoun, N., 2023, In: Polish Journal of Ecology. 70, p. 159-171 13 p.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    1 Citation (Scopus)

  • Domestication in dry-cured meat Penicillium fungi: Convergent specific phenotypes and horizontal gene transfers without strong genetic subdivision

    Lo, Y. C., Bruxaux, J., Rodríguez de la Vega, R. C., O'Donnell, S., Snirc, A., Coton, M., Le Piver, M., Le Prieur, S., Roueyre, D., Dupont, J., Houbraken, J., Debuchy, R., Ropars, J., Giraud, T. & Branca, A., Sept 2023, In: Evolutionary Applications. 16, 9, p. 1637-1660 24 p.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    3 Citations (Scopus)

  • Endosymbionts: Bacterial hijacking of fungi?

    Dijksterhuis, J., 24 Jul 2023, In: Current Biology. 33, 14, p. R765-R767

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    1 Citation (Scopus)

  • Evolutionary histories of type I fatty acid synthases in fungi

    Collemare, J. & Guo, Y., Mar 2023.

    Research output: Contribution to conference › Poster › Scientific

  • Evolving genotypes: The multiple faces of Malassezia furfur

    Theelen, B. J. F., 25 Oct 2023, 349 p.

    Research output: PhD Thesis › PhD thesis

  • First Terbinafine-Resistant Trichophyton indotineae Isolates with Phe397Leu and/or Thr414His Mutations in Turkey

    Durdu, M., Kandemir, H., Karakoyun, A. S., Ilkit, M., Tang, C. & de Hoog, S., 19 Jan 2023, In: Mycopathologia. 188, 1, p. 2

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    21 Citations (Scopus)

  • Functional analysis of two transcription factor-encoding genes within secondary metabolite biosynthetic clusters in Parastagonospora nodorum

    Collemare, J. & Choupannejad, R., Mar 2023.

    Research output: Contribution to conference › Poster › Scientific

  • Fungal Nomenclature: Managing Change is the Name of the Game

    Kidd, S. E., Abdolrasouli, A. & Hagen, F., 07 Jan 2023, In: Open Forum Infectious Diseases. 10, 1, p. ofac559

    Research output: Contribution to journal/periodical › Book/Film/Article review › Scientific

    Open Access

  • Fungal pathogens exposed: Novel insights into Candida auris and emerging relatives of the Candida haemulonii species complex

    de Jong, A., 22 Dec 2023

    Research output: PhD Thesis › PhD thesis

  • Fungal Planet description sheets: 1478-1549

    Crous, P. W., Osieck, E. R., Shivas, R. G., Tan, Y. P., Bishop-Hurley, S. L., Esteve-Raventos, F., Larsson, E., Luangsa-ard, J. J., Pancorbo, F., Balashov, S., Baseia, I. G., Boekhout, T., Chandranayaka, S., Cowan, D. A., Cruz, R. H. S. F., Czachura, P., De la Peña-Lastra, S., Dovana, F., Drury, B., Fell, J., & 126 othersFlakus, A., Fotedar, R., Jurjevi, ., Kolecka, A., Mack, J., Maggs-Kölling, G., Mahadevakumar, S., Mateos, A., Mongkolsamrit, S., Noisripoom, W., Plaza, M., Overy, D. P., Piątek, M., Sandoval-Denis, M., Vauras, J., Wingfield, M. J., Abell, S. E., Ahmadpour, A., Akulov, A., Alavi, F., Alavi, Z., Altes, A., Alvarado, P., Anand, G., Ashtekar, N., Assyov, B., Banc-Prandi, G., Barbosa, K. D., Barreto, G. G., Bellanger, J. M., Bezerra, J. L., Bhat, D. J., Bilaski, P., Bose, T., Bozok, F., Chaves, J., Costa-Rezende, D. H., Danteswari, C., Darmostuk, V., Delgado, G., Denman, S., Eichmeier, A., Etayo, J., Eyssartier, G., Faulwetter, S., Ganga, K. G. G., Ghosta, Y., Goh, J., Gois, J. S., Gramaje, D., Granit, L., Groenewald, M., Gulden, G., Gusmão, L. F. P., Hammerbacher, A., Heidarian, Z., Hywel-Jones, N., Jankowiak, R., Kaliyaperumal, M., Kaygusuz, O., Kezo, K., Khonsanit, A., Kumar, S., Kuo, C. H., T., L., Latha, K. P. D., Loizides, M., Luo, S. M., Macia-Vicente, J. G., Manimohan, P., Marbach, P. A. S., Marinho, P., Marney, T. S., Marques, G., Martın, M. P., Miller, A. N., Mondello, F., Moreno, G., Mufeeda, K. T., Mun, H. Y., Nau, T., Nkomo, T., Okrasiska, A., Oliveira, J. P. A. F., Oliveira, R. L., Ortiz, D. A., Pawowska, J., Perez-De-Gregorio, M. A., Podile, A. R., Portugal, A., Privitera, N., Rajeshkumar, K. C., Rauf, I., Rian, B., Rigueiro-Rodrıguez, A., Rivas-Torres, G. F., Rodriguez-Flakus, P., Romero-Gordillo, M., Saar, I., Saba, M., Santos, C. D., Sarma, P. V. S. R. N., Siquier, J. L., Sleiman, S., Spetik, M., Sridhar, K. R., Stryjak-Bogacka, M., Szczepaska, K., Taikn, H., Tennakoon, D. S., Thanakitpipattana, D., Trovão, J., Türkekul, A., van Iperen, A. L., van 't Hof, P., Vasquez, G., Visagie, C. M., Wingfield, B. D., Wong, P. T. W., Yang, W. X., Yarar, M., Yarden, O., Yilmaz, N., Zhang, N., Zhu, Y. N. & Groenewald, J. Z., Jun 2023, In: Persoonia. 50, 1, p. 158-310 153 p.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    35 Citations (Scopus)

  • Fungal Planet description sheets: 1550-1613

    Crous, P. W., Costa, M. M., Kandemir, H., Vermaas, M., Vu, D., Zhao, L., Arumugam, E., Flakus, A., Jurjević, Ž., Kaliyaperumal, M., Mahadevakumar, S., Murugadoss, R., Shivas, R. G., Tan, Y. P., Wingfield, M. J., Abell, S. E., Marney, T. S., Danteswari, C., Darmostuk, V., Denchev, C. M., & 98 othersDenchev, T. T., Etayo, J., Gené, J., Gunaseelan, S., Hubka, V., Illescas, T., Jansen, G. M., Kezo, K., Kumar, S., Larsson, E., Mufeeda, K. T., Piątek, M., Rodriguez-Flakus, P., Sarma, P. V. S. R. N., Stryjak-Bogacka, M., Torres-Garcia, D., Vauras, J., Acal, D. A., Akulov, A., Alhudaib, K., Asif, M., Balashov, S., Baral, H-O., Baturo-Cieśniewska, A., Begerow, D., Beja-Pereira, A., Bianchinotti, M. V., Bilański, P., Chandranayaka, S., Chellappan, N., Cowan, D. A., Custódio, F. A., Czachura, P., Delgado, G., De Silva, N. I., Dijksterhuis, J., Dueñas, M., Eisvand, P., Fachada, V., Fournier, J., Fritsche, Y., Fuljer, F., Ganga, K. G. G., Guerra, M. P., Hansen, K., Hywel-Jones, N., Ismail, A. M., Jacobs, C. R., Jankowiak, R., Karich, A., Kemler, M., Kisło, K., Klofac, W., Krisai-Greilhuber, I., Latha, K. P. D., Lebeuf, R., Lopes, M. E., Lumyong, S., Maciá-Vicente, J. G., Maggs-Kölling, G., Magistà, D., Manimohan, P., Martín, M. P., Mazur, E., Mehrabi-Koushki, M., Miller, A. N., Mombert, A., Ossowska, E. A., Patejuk, K., Pereira, O. L., Piskorski, S., Plaza, M., Podile, A. R., Polhorský, A., Pusz, W., Raza, M., Ruszkiewicz-Michalska, M., Saba, M., Sánchez, R. M., Singh, R., Śliwa, L., Smith, M. E., Stefenon, V. M., Strašiftáková, D., Suwannarach, N., Szczepańska, K., Telleria, M. T., Tennakoon, D. S., Thines, M., Thorn, R. G., Urbaniak, J., van der Vegte, M., Vasan, V., Vila-Viçosa, C., Voglmayr, H., Wrzosek, M., Zappelini, J. & Groenewald, J. Z., 30 Dec 2023, In: Persoonia. 51, p. 280-417 138 p.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    22 Citations (Scopus)

  • Fungi use highly diverse approaches for plant biomass conversion as revealed through bioinformatic analysis

    Li, J., 09 Jan 2023

    Research output: PhD Thesis › PhD thesis

    Open Access

  • Genome Mining Reveals a Surprising Number of Sugar Reductases in Aspergillus niger.

    Mueller, A., Xu, L., Heine, C., Flach, T., Mäkelä, M. R. & de Vries, R. P., 24 Nov 2023, In: Journal of Fungi. 9, 12

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    1 Citation (Scopus)

  • Global consortium for the classification of fungi and fungus-like taxa

    Hyde, K. D., Abdel-Wahab, M. A., Abdollahzadeh, J., Abeywickrama, P. D., Absalan, S., Afshari, N., Ainsworth, A. M., Akulov, O. Y., Aleoshin, V. V., Al-Sadi, A. M., Alvarado, P., Alves, A., Alves-Silva, G., Amalfi, M., Amira, Y., Amuhenage, T. B., Anderson, J., Antonín, V., Aouali, S., Aptroot, A., & 530 othersApurillo, C. C. S., Araújo, J. P. M., Ariyawansa, H. A., Armand, A., Arumugam, E., Asghari, R., Assis, D. M. A., Atienza, V., Avasthi, S., Azevedo, E., Bahkali, A. H., Bakhshi, M., Banihashemi, Z., Bao, D. F., Baral, H. O., Barata, M., Barbosa, F., Barbosa, R. N., Barreto, R. W., Baschien, C., Belamesiatseva, D. B., Bennett Reuel, M., Bera, I., Bezerra, J. D. P., Bezerra, J. L., Bhat, D. J., Bhunjun, C. S., Bianchinotti, M. V., Błaszkowski, J., Blondelle, A., Boekhout, T., Bonito, G., Boonmee, S., Boonyuen, N., Bregant, C., Buchanan, P., Bundhun, D., Burgaud, G., Burgess, T., Buyck, B., Cabarroi-Hernández, M., Cáceres, M. E. S., Caeiro, M. F., Cai, L., Cai, M. F., Calabon, M. S., Calaça, F. J. S., Callalli, M., Camara, M. P. S., Cano-Lira, J. F., Cantillo, T., Cao, B., Carlavilla, J. R., Carvalho, A., Castañeda-Ruiz, R. F., Castlebury, L., Castro-Jauregui, O., Catania, M. D. V., Cavalcanti, L. H., Cazabonne, J., Cedeño-Sanchez, M. L., Chaharmiri-Dokhaharani, S., Chaiwan, N., Chakraborty, N., Chaverri, P., Cheewangkoon, R., Chen, C., Chen, C. Y., Chen, K. H., Chen, J., Chen, Q., Chen, W. H., Chen, Y. P., Chethana, K. W. T., Coleine, C., Condé, T. O., Corazon-Guivin, M. A., Cortés-Pérez, A., Costa-Rezende, D. H., Courtecuisse, R., Crouch, J. A., Crous, P. W., Cui, B. K., Cui, Y. Y., da Silva, D. K. A., da Silva, G. A., da Silva, I. R., da Silva, R. M. F., da Silva Santos, A. C., Dai, D. Q., Dai, Y. C., Damm, U., Darmostuk, V., Daroodi, Z., Das, K., Das, K., Davoodian, N., Davydov, E. A., Dayarathne, M. C., Decock, C., de Groot, M. D., De Kesel, A., dela Cruz, T. E. E., De Lange, R., Delgado, G., Denchev, C. M., Denchev, T. T., de Oliveira, N. T., de Silva, N. I., de Souza, F. A., Dentinger, B., Devadatha, B., Dianese, J. C., Dima, B., Diniz, A. G., Dissanayake, A. J., Dissanayake, L. S., Doğan, H. H., Doilom, M., Dolatabadi, S., Dong, W., Dong, Z. Y., Dos Santos, L. A., Drechsler-Santos, E. R., Du, T. Y., Dubey, M. K., Dutta, A. K., Egidi, E., Elliott, T. F., Elshahed, M. S., Erdoğdu, M., Ertz, D., Etayo, J., Evans, H. C., Fan, X. L., Fan, Y. G., Fedosova, A. G., Fell, J., Fernandes, I., Firmino, A. L., Fiuza, P. O., Flakus, A., Fragoso de Souza, C. A., Frisvad, J. C., Fryar, S. C., Gabaldón, T., Gajanayake, A. J., Galindo, L. J., Gannibal, P. B., García, D., García-Sandoval, S. R., Garrido-Benavent, I., Garzoli, L., Gautam, A. K., Ge, Z. W., Gené, D. J., Gentekaki, E., Ghobad-Nejhad, M., Giachini, A. J., T.b., G., Góes-Neto, A., Gomdola, D., Gomes de Farias, A. R., Gorjón, S. P., Goto, B. T., Granados-Montero, M. M., Griffith, G. W., Groenewald, J. Z., Groenewald, M., Grossart, H. P., Gueidan, C., Gunarathne, A., Gunaseelan, S., Gusmão, L. F. P., Gutierrez, A. C., Guzmán-Dávalos, L., Haelewaters, D., Halling, R., Han, Y. F., Hapuarachchi, K. K., Harder, C. B., Harrington, T. C., Hattori, T., He, M. Q., He, S., He, S. H., Healy, R., Herández-Restrepo, M., Heredia, G., Hodge, K. T., Holgado-Rojas, M., Hongsanan, S., Horak, E., Hosoya, T., Houbraken, J., Huang, S. K., Huanraluek, N., Hur, J. S., Hurdeal, V. G., Hustad, V. P., Iotti, M., Iturriaga, T., Jafar, E., Janik, P., Jayalal, R. G. U., Jayasiri, S. C., Jayawardena, R. S., Jeewon, R., Jerônimo, G. H., Jesus, A. L., Jin, J., Johnston, P. R., Jones, E. B. G., Joshi, Y., Justo, A., Kaishian, P., Kakishima, M., Kaliyaperumal, M., Kang, G. P., Kang, J. C., Karimi, O., Karpov, S. A., Karunarathna, S. C., Kaufmann, M., Kemler, M., Kezo, K., Khyaju, S., Kirchmair, M., Kirk, P. M., Kitaura, M. J., Klawonn, I., Kolarik, M., Kong, A., Kuhar, F., Kukwa, M., Kumar, S., Kušan, I., Lado, C., Larsson, K. H., Latha, K. P. D., Lee, H. B., Leonardi, M., Leontyev, D. L., Lestari, A. S., Li, C. J. Y., Li, D. W., Li, H., Li, H. Y., Li, L., Li, Q. R., Li, W. L., Li, Y., Li, Y. C., Liao, C. F., Liimatainen, K., Lim, Y. W., Lin, C. G., Linaldeddu, B. T., Linde, C. C., Linn, M. M., Liu, F., Liu, J. K., Liu, N. G., Liu, S., Liu, S. L., Liu, X. F., Liu, X. Y., Liu, X. Z., Liu, Z. B., Lu, L., Lu, Y. Z., Luangharn, T., Luangsa-ard, J. J., Lumbsch, H. T., Lumyong, S., Luo, L., Luo, M., Luo, Z. L., Ma, J., Machado, A. R., Madagammana, A. D., Madrid, H., Magurno, F., Magyar, D., Mahadevan, N., Maharachchikumbura, S. S. N., Maimaiti, Y., Malosso, E., Manamgoda, D. S., Manawasinghe, I. S., Mapook, A., Marasinghe, D. S., Mardones, M., Marin-Felix, Y., Márquez, R., Masigol, H., Matočec, N., May, T. W., McKenzie, E. H. C., Meiras-Ottoni, A., Melo, R. F. R., Mendes, A. R. L., Mendieta, S., Meng, Q. F., Menkis, A., Menolli, N. J., Mešić, A., Meza Calvo, J. G., Mikhailov, K. V., Miller, S. L., Moncada, B., Moncalvo, J. M., Monteiro, J. S., Monteiro, M., Mora-Montes, H. M., Moreau, P. A., Mueller, G. M., Mukhopadyay, S., Murugadoss, R., Nagy, L. G., Najafiniya, M., Nanayakkara, C. M., Nascimento, C. C., Nei, Y., Neves, M. A., Neuhauser, S., Niego, A. G. T., Nilsson, R. H., Niskanen, T., Niveiro, N., Noorabadi, M. T., Noordeloos, M. E., Norphanphoun, C., Nuñez Otaño, N. B., O’Donnell, R. P., Oehl, F., Olariaga, I., Orlando, F. P., Pang, K. L., Papp, V., Pawłowska, J., Peintner, U., Pem, D., Pereira, O. L., Perera, R. H., Perez-Moreno, J., Perez-Ortega, S., Péter, G., Phillips, A. J. L., Phonemany, M., Phukhamsakda, C., Phutthacharoen, K., Piepenbring, M., Pires-Zottarelli, C. L. A., Poinar, G., Pošta, A., Prieto, M., Promputtha, I., Quandt, C. A., Radek, R., Rahnama, K., Raj, K. N. A., Rajeshkumar, K. C., Rämä, T., Rambold, G., Ramírez-Cruz, V., Rasconi, S., Rathnayaka, A. R., Raza, M., Ren, G. C., Robledo, G. L., Rodriguez-Flakus, P., Ronikier, A., Rossi, W., Ryberg, M., Ryvarden, L. R., Salvador-Montoya, C. A., Samant, B., Samarakoon, B. C., Samarakoon, M. C., Sánchez-Castro, I., Sánchez-García, M., Sandoval-Denis, M., Santiago, A. L. C. M. A., Santamaria, B., Santos, A. C. S., Sarma, V. V., Savchenko, A., Savchenko, K., Saxena, R. K., Scholler, M., Schoutteten, N., Seifollahi, E., Selbmann, L., Selcuk, F., Senanayake, I. C., Seto, K., Shabashova, T. G., Shen, H. W., Shen, Y. M., Silva-Filho, A. G. S., Simmons, D. R., Singh, R., Sir, E. B., Song, C. G., Souza-Motta C.M. Sruthi, O. P., Stadler, M., Stchigel, A. M., Stemler, J., Stephenson, S. L., Strassert, J. F. H., Su, H. L., Su, L., Suetrong, S., Sulistyo, B., Sun, Y. F., Sun, Y. R., Svantesson, S., Sysouphanthong, P., Takamatsu, S., Tan, T. H., Tanaka, K., Tang, A. M. C., Tang, X., Tanney, J. B., Tavakol, N. M., Taylor, J. E., Taylor, P. W. J., Tedersoo, L., Tennakoon, D. S., Thamodini, G. K., Thines, M., Thiyagaraja, V., Thongklang, N., Tiago, P. V., Tian, Q., Tian, W. H., Tibell, L., Tibell, S., Tibpromma, S., Tkalčec, Z., Tomšovský, M., Toome-Heller, M., Torruella, G., Tsurykau, A., Udayanga, D., Ulukapi, M., Untereiner, W. A., Uzunov, B. A., Valle, L. G., Van Caenegem, W., Van den Wyngaert, S., Van Vooren, N., Velez, P., Verma, R. K., Vieira, L. C., Vieira, W. A. S., Vizzini, A., Walker, A., Walker, A. K., Wanasinghe, D. N., Wang, C. G., Wang, K., Wang, S. X., Wang, X. Y., Wang, Y., Wannasawang, N., Wartchow, F., Wei, D. P., Wei, X. L., White, J. F., Wijayawardene, N. N., Wijesinghe, S. N., Wijesundara, D. S. A., Wisitrassameewong, K., Worthy, F. R., Wu, F., Wu, G., Wu, H. X., Wu, N., Wu, W. P., Wurzbacher, C., Xiao, Y. P., Xiong, Y. R., Xu, L. J., Xu, R., Xu, R. F., Xu, R. J., Xu, T. M., Yakovchenko, L., Yan, J. Y., Yang, H., Yang, J., Yang, Z. L., Yang, Y. H., Yapa, N., Yasanthika, E., Youssef, N. H., Yu, F. M., Yu, Q., Yu, X. D., Yu, Y. X., Yu, Z. F., Yuan, H. S., Yuan, Y., Yurkov, A., Zafari, D., Zamora, J. C., Zare, R., Zeng, M., Zeng, N. K., Zeng, X. Y., Zhang, F., Zhang, H., Zhang, J. F., Zhang, J. Y., Zhang, Q. Y., Zhang, S. N., Zhang, W., Zhang, Y., Zhang, Y. X., Zhao, C. L., Zhao, H., Zhao, Q., Zhao, R. L., Zhou, L. W., Zhou, M., Zhurbenko, M. P., Zin, H. H. & Zucconi, L., 12 Dec 2023, In: Mycosphere. 14, 1, p. 1960-2012 53 p.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

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    8 Citations (Scopus)

  • Groenewaldia (Lentitheciaceae), a new corticolous fungal genus from India

    Rajeshkumar, K. C., Varma, R. K., Sruthi, O. P., Gautam, A. K. & Crous, P. W., 23 May 2023, In: Mycological Progress. 22, 6, 16 p., 43.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

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    10 Citations (Scopus)

  • Heterologous protein production in filamentous fungi

    Liu, D., Garrigues, S. & de Vries, R. P., Aug 2023, In: Applied Microbiology and Biotechnology. 107, 16, p. 5019-5033 15 p.

    Research output: Contribution to journal/periodical › Book/Film/Article review › Scientific

    Open Access
    26 Citations (Scopus)

  • High species diversity in Diaporthe associated with citrus diseases in China

    Xiao, X. E., Liu, Y. D., Zheng, F., Xiong, T., Zeng, Y. T., Wang, W., Zheng, X. L., Wu, Q., Xu, J. P., Crous, P. W., Jiao, C. & Li, H. Y., 31 Dec 2023, In: Persoonia. 51, p. 229-256 28 p.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

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    5 Citations (Scopus)

  • High-Throughput Microsatellite Markers Development for Genetic Characterization of Emerging Sporothrix Species

    Losada, L. C. D. M. L., Monteiro, R. C., Carvalho, J. A. D., Hagen, F., Fisher, M. C., Spruijtenburg, B., Meis, J. F., Groot, T. D., Gonçalves, S. S., Negroni, R., Kano, R., Bonifaz, A., Camargo, Z. P. D. & Rodrigues, A. M., 14 Mar 2023, In: Journal of Fungi.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

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    13 Citations (Scopus)

  • How, not if, is the question mycologists should be asking about DNA-based typification

    Nilsson, R. H., Ryberg, M., Wurzbacher, C., Tedersoo, L., Anslan, S., Põlme, S., Spirin, V., Mikryukov, V., Svantesson, S., Hartmann, M., Lennartsdotter, C., Belford, P., Khomich, M., Retter, A., Corcoll, N., Martinez, D. G., Jansson, T., Ghobad-Nejhad, M., Vu, D., Sanchez-Garcia, M., & 2 othersKristiansson, E. & Abarenkov, K., 2023, In: MycoKeys. 96, p. 143-157 15 p.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

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    17 Citations (Scopus)

  • Identification of an l-Arabitol Transporter from Aspergillus niger.

    Meng, J., Mäkelä, M. R. & de Vries, R. P., 17 Jan 2023, In: Biomolecules. 13, 2

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

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    1 Citation (Scopus)

  • Identification of Clinical Trichosporon asteroides Strains by MALDI-TOF Mass Spectrometry: Evaluation of the Bruker Daltonics Commercial System and an In-House Developed Library

    Jun 2023, In: Mycopathologia. 188, 3, p. 243-249 7 p.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    4 Citations (Scopus)

  • IMA genome-F18: The re-identification of Penicillium genomes available in NCBI and draft genomes for Penicillium species from dry cured meat, Penicillium biforme, P. brevicompactum, P. solitum, and P. cvjetkovicii, Pewenomyces kutranfy, Pew. lalenivora, Pew. tapulicola, Pew. kalosus, Teratosphaeria carnegiei, and Trichoderma atroviride SC1

    Visagie, C. M., Magistà, D., Ferrara, M., Balocchi, F., Duong, T. A., Eichmeier, A., Gramaje, D., Aylward, J., Baker, S. E., Barnes, I., Calhoun, S., De Angelis, M., Frisvad, J. C., Hakalova, E., Hayes, R. D., Houbraken, J., Grigoriev, I. V., LaButti, K., Leal, C., Lipzen, A., & 10 othersNg, V., Pangilinan, J., Pecenka, J., Perrone, G., Piso, A., Savage, E., Spetik, M., Wingfield, M. J., Zhang, Y. & Wingfield, B. D., Dec 2023, In: IMA Fungus. 14, 1, 21.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

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    3 Citations (Scopus)

  • In vitro activity of isavuconazole against clinically relevant Trichosporon species: a comparative evaluation of EUCAST broth microdilution and MIC Test Strip methods

    02 Mar 2023, In: Journal of Antimicrobial Chemotherapy. 78, 3, p. 817-822 6 p.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    3 Citations (Scopus)

  • MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters

    Terlouw, B. R., Blin, K., Navarro-Muñoz, J. C., Avalon, N. E., Chevrette, M. G., Egbert, S., Lee, S., Meijer, D., Recchia, M. J. J., Reitz, Z. L., van Santen, J. A., Selem-Mojica, N., Tørring, T., Zaroubi, L., Alanjary, M., Aleti, G., Aguilar, C., Al-Salihi, S. A. A., Augustijn, H. E., Avelar-Rivas, J. A., & 62 othersAvitia-Domínguez, L. A., Barona-Gómez, F., Bernaldo-Agüero, J., Bielinski, V. A., Biermann, F., Booth, T. J., Carrion Bravo, V. J., Castelo-Branco, R., Chagas, F. O., Cruz-Morales, P., Du, C., Duncan, K. R., Gavriilidou, A., Gayrard, D., Gutiérrez-García, K., Haslinger, K., Helfrich, E. J. N., van der Hooft, J. J. J., Jati, A. P., Kalkreuter, E., Kalyvas, N., Kang, K. B., Kautsar, S., Kim, W., Kunjapur, A. M., Li, Y-X., Lin, G-M., Loureiro, C., Louwen, J. J. R., Louwen, N. L. L., Lund, G., Parra, J., Philmus, B., Pourmohsenin, B., Pronk, L. J. U., Rego, A., Balaya Rex, D. A., Robinson, S., Rosas-Becerra, L. R., Roxborough, E. T., Schorn, M. A., Scobie, D. J., Singh, K. S., Sokolova, N., Tang, X., Udwary, D., Vigneshwari, A., Vind, K., Vromans, S. P. J. M., Waschulin, V., Williams, S. E., Winter, J. M., Witte, T. E., Xie, H., Yang, D., Yu, J., Zdouc, M., Zhong, Z., Collemare, J., Linington, R. G., Weber, T. & Medema, M. H., 2023, In: Nucleic Acids Research. 51, D1, p. D603-D610

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    File
    198 Citations (Scopus)
    68 Downloads (Pure)

  • Misidentification of Talaromyces marneffei in wild animal and human nasal samples in Portugal - Red pigment production is not unique

    Le, T., Houbraken, J. & Hagen, F., 01 Oct 2023, In: Research in Veterinary Science. 164, p. 105035

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Molecular epidemiology and antifungal susceptibility of clinical fungi in Qatar, and the emergence of uncommon species

    Mohamed, H. E. S. I., 12 Apr 2023

    Research output: PhD Thesis › PhD thesis

  • Molecular epidemiology of clinical filamentous fungi in Qatar beyond Aspergillus and Fusarium with notes on the rare species

    Salah, H., Houbraken, J., Boekhout, T., Almaslamani, M. & Taj-Aldeen, S. J., 01 Jan 2023, In: Medical Mycology. 61, 1, myac098.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    2 Citations (Scopus)

  • Molecular Taxonomy

    Hagen, F., Walther, G., Houbraken, J., James Scott, J. C., Summerbell, R. C. & Boekhout, T., 15 Sept 2023, Diagnosis and Treatment of Fungal Infections. Hospenthal, D. R., Rinaldi, M. G. & Walsh, T. J. (eds.). Cham: Springer, p. 31-60 30 p.

    Research output: Chapter in book/volume › Chapter › Scientific › peer-review

  • Mycoparasites, Gut Dwellers, and Saprotrophs: Phylogenomic Reconstructions and Comparative Analyses of Kickxellomycotina Fungi

    Reynolds, N. K., Stajich, J. E., Benny, G. L., Barry, K., Mondo, S., LaButti, K., Lipzen, A., Daum, C., Grigoriev, I. V., Ho, H-M., Crous, P. W., Spatafora, J. W. & Smith, M. E., 01 Jan 2023, In: Genome Biology and Evolution. 15, 1, 22 p., evac185.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

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    4 Citations (Scopus)

  • Natural folding of airborne fungal spores: a mechanism for dispersal and long-term survival?

    Segers, F. J. J., Dijksterhuis, J., Giesbers, M. & Debets, A. J. M., Jun 2023, In: Fungal Biology Reviews. 44, 100292.

    Research output: Contribution to journal/periodical › Book/Film/Article review › Scientific

    Open Access
    9 Citations (Scopus)

  • New and Interesting Fungi. 6

    Crous, P. W., Akulov, A., Balashov, S., Boers, J., Braun, U., Castillo, J., Delgado, M. A., Denman, S., Erhard, A., Gusella, G., Jurjevi, ., Kruse, J., Malloch, D. W., Osieck, E. R., Polizzi, G., Schumacher, R. K., Slootweg, E., Starink-Willemse, M., van Iperen, A. L., Verkley, G. J. M., & 1 othersGroenewald, J. Z., Jun 2023, In: Fungal Systematics and Evolution. 11, 1, p. 109-156 48 p.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

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    16 Citations (Scopus)

  • New mycoparasitic species in the genera Niveomyces and Pseudoniveomyces gen. nov. (Hypocreales: Cordycipitaceae), with sporothrix-like asexual morphs, from Thailand

    Kobmoo, N., Tasanathai, K., Araújo, J. P. M., Noisripoom, W., Thanakitpipattana, D., Mongkolsamrit, S., Himaman, W., Houbraken, J. & Luangsa-ard, J. J., 28 Aug 2023, In: Fungal Systematics and Evolution. 12, p. 91-110 20 p.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

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    5 Citations (Scopus)

  • Non-homologous end-joining-deficient filamentous fungal strains mitigate the impact of off-target mutations during the application of CRISPR/Cas9

    Garrigues, S., Peng, M., Kun, R. S. & de Vries, R. P., 31 Aug 2023, In: mBio. 14, 4, p. e0066823

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

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    7 Citations (Scopus)

  • Novel Antifungals and Aspergillus Section Terrei with Potpourri Susceptibility Profiles to Conventional Antifungals

    Vahedi-Shahandashti, R., Houbraken, J., Birch, M. & Lass-Flörl, C., 06 Jun 2023, In: Journal of Fungi. 9, 6, p. 1-9 9 p., 649.

    Research output: Contribution to journal/periodical › Article › Scientific › peer-review

    Open Access
    2 Citations (Scopus)

  • Opportunistic yeasts on stored apples: A One Health perspective

    Karakoyun, A. S., Ünal, N., Metin, B., Servi, E. Y., Spruijtenburg, B., Özarslan, M. A., Gümral, R., Döğen, A., Ilkit, M., Kandemir, H., Meis, J. F. & Ergin, Ç., 2023, In: One Health Mycology.

    Research output: Contribution to journal/periodical › Article › Popularizing

    Open Access