Research Output per year
Research Output
2020
101 Dothideomycetes genomes: A test case for predicting lifestyles and emergence of pathogens
Haridas, S., Albert, R., Binder, M., Bloem, J., LaButti, K., Salamov, A., Andreopoulos, B., Baker, S. E., Barry, K., Bills, G., Bluhm, B. H., Cannon, C., Castanera, R., Culley, D. E., Daum, C., Ezra, D., González, J. B., Henrissat, B., Kuo, A., Liang, C. & 19 others, , Jun 2020, In : Studies in Mycology. 96, p. 141 - 153Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
A computational framework to explore large-scale biosynthetic diversity
Navarro-Munoz, J. C., Selem-Mojica, N., Mullowney, M. W., Kautsar, S. A., Tryon, J. H., Parkinson, E. I., De Los Santos, E. L. C., Yeong, M., Cruz-Morales, P., Abubucker, S., Roeters, A., Lokhorst, W., Fernandez-Guerra, A., Cappelini, L. T. D., Goering, A. W., Thomson, R. J., Metcalf, W. W., Kelleher, N. L., Barona-Gomez, F. & Medema, M. H., Jan 2020, In : Nature Chemical Biology. 16, 1, p. 60-+Research output: Contribution to journal/periodical › Article › Scientific › peer-review
A new species concept for the clinically relevant Mucor circinelloides complex
Wagner, L., Stielow, J. B., de Hoog, S., Bensch, K., Schwartze, V. U., Voigt, K., Alastruey-Izquierdo, A., Kurzai, O. & Walther, G., Jun 2020, In : Persoonia: Molecular Phylogeny and Evolution of Fungi. p. 67-97Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Anthracnose disease of carpetgrass (Axonopus compressus) caused by Colletotrichum hainanense sp. nov.
Zhang, W., Damm, U., Crous, P. W., Groenewald, J. Z., Niu, X., Lin, J. & Li, Y., Apr 2020, In : Plant Disease. 104, 6, p. 1744-1750 7 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Citizen science project reveals high diversity in Didymellaceae (Pleosporales, Dothideomycetes)
Hou, L., Hernández-Restrepo, M., Groenewald, J. Z., Cai, L. & Crous, P. W., 10 Mar 2020, In : MycoKeys. 65, p. 49-99 51 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
CRISPR/Cas9 technology enables the development of the filamentous ascomycete fungus Penicillium subrubescens as a new industrial enzyme producer
Salazar-Cerezo, S., Kun, R. S., de Vries, R. P. & Garrigues, S., Feb 2020, In : Enzyme and microbial technology. 133, p. 109463Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Cytospora (Diaporthales) in China
Fan, X., Bezerra, J. D. P., Tian, C-M. & Crous, P. W., Dec 2020, In : Persoonia: Molecular Phylogeny and Evolution of Fungi. 45, p. 1-45Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Design and Experimental Evaluation of a Minimal, Innocuous Watermarking Strategy to Distinguish Near-Identical DNA and RNA Sequences
Boonekamp, F. J., Dashko, S., Duiker, D., Gehrmann, T., van den Broek, M., den Ridder, M., Pabst, M., Robert, V., Abeel, T., Postma, E. D., Daran, J-M. & Daran-Lapujade, P., 19 Jun 2020, In : Systems and Synthetic Biology. 9, 6, p. 1361-1375 15 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Diversity and toxigenicity of fungi and description of Fusarium madaense sp. nov. from cereals, legumes and soils in north-central Nigeria
Ezekiel, C. N., Kraak, B., Sandoval-Denis, M., Sulyok, M., Oyedele, O. A., Ayeni, K. I., Makinde, O. M., Akinyemi, O. M., Krska, R., Crous, P. W. & Houbraken, J., 08 Jun 2020, In : MycoKeys. 67, p. 95-124 30 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Human blastomycosis in South Africa caused by Blastomyces percursus and Blastomyces africanus sp. nov., 1967 - 2014
Maphanga, T. G., Birkhead, M., Muñoz, J. F., Allam, M., Zulu, T. G., Cuomo, C. A., Schwartz, I. S., Ismail, A., Naicker, S. D., Mpembe, R. S., Corcoran, C., de Hoog, S., Kenyon, C., Borman, A. M., Frean, J. A. & Govender, N. P., 02 Jan 2020, In : Journal of Clinical Microbiology.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Madurella real-time PCR, a novel approach for eumycetoma diagnosis
Arastehfar, A., Lim, W., Daneshnia, F., van de Sande, W. W. J., Fahal, A. H., Desnos-Ollivier, M., de Hoog, G. S., Boekhout, T. & Ahmed, S. A., 15 Jan 2020, In : PLoS Neglected Tropical Diseases. 14, 1, p. e0007845Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Mixtures of aromatic compounds induce ligninolytic gene expression in the wood-rotting fungus Dichomitus squalens
Daly, P., Peng, M., Casado López, S., Lipzen, A., Ng, V., Singan, V. R., Wang, M., Grigoriev, I. V., de Vries, R. P. & Mäkelä, M. R., 20 Jan 2020, In : Journal of Biotechnology. 308, p. 35-39 5 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Multi-locus phylogeny of the genus Curvularia and description of ten new species
Marin-Felix, Y., Hernández-Restrepo, M. & Crous, P. W., 21 May 2020, In : Mycological Progress. 19, 6, p. 559-588 30 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
New and Interesting Fungi. 3
Crous, P. W., Wingfield, M. J., Schumacher, R. K., Akulov, A., Bulgakov, T. S., Carnegie, A. J., Jurjević, Ž., Decock, C., Denman, S., Lombard, L., Lawrence, D. P., Stack, A. J., Gordon, T. R., Bostock, R. M., Burgess, T., Summerell, B. A., Taylor, P. W. J., Edwards, J., Hou, L. W., Cai, L. & 6 others, , May 2020, In : Fungal Systematics and Evolution. 6, p. 157-231 75 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
New multilocus sequence typing primers to enable genotyping of AD hybrids within the Cryptococcus neoformans species complex
Cogliati, M., Roger, F., Meyer, W., Robert, V. & Bertout, S., 08 Jun 2020, In : Medical Mycology.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Polyphasic identification of three new species in Alternaria section Infectoriae causing human cutaneous infection
Iturrieta-González, I., Pujol, I., Iftimie, S., García, D., Morente, V., Queralt, R., Guevara-Suarez, M., Alastruey-Izquierdo, A., Ballester, F., Hernández-Restrepo, M. & Gené, J., 01 Feb 2020, In : Mycoses. 63, 2, p. 212-224 13 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Recombinant production and characterization of six novel GH27 and GH36 α-galactosidases from Penicillium subrubescens and their synergism with a commercial mannanase during the hydrolysis of lignocellulosic biomass
Coconi Linares, N., Dilokpimol, A., Stålbrand, H., Mäkelä, M. R. & de Vries, R. P., Jan 2020, In : Bioresource Technology. 295, p. 122258Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Reevaluating Cryphonectriaceae and allied families in Diaporthales
Jiang, N., Fan, X., Tian, C. & Crous, P. W., Feb 2020, In : Mycologia. 112, 2, p. 267-292 26 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
The Genera of Fungi - G5: Arthrinium, Ceratosphaeria, Dimerosporiopsis, Hormodochis, Lecanostictopsis, Lembosina, Neomelanconium, Phragmotrichum, Pseudomelanconium, Rutola, and Trullula
Crous, P. W., Schumacher, R. K., Wood, A. R. & Groenewald, J. Z., Jun 2020, In : Fungal Systematics and Evolution. 5, p. 77-98 22 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
The Genera of Fungi - G6: Arthrographis, Kramasamuha, Melnikomyces, Thysanorea, and Verruconis
Hernández-Restrepo, M., [Unknown], A. G., Doorn, R. V., Wingfield, M. J., Groenewald, J. Z., Barreto, R. W., Colmán, A. A., Mansur, P. S. C. & Crous, P. W., Feb 2020, In : Fungal Systematics and Evolution. 6, p. 1-24 24 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?
Lücking, R., Aime, M. C., Robbertse, B., Miller, A. N., Ariyawansa, H. A., Aoki, T., Cardinali, G., Crous, P. W., Druzhinina, I. S., Geiser, D. M., Hawksworth, D. L., Hyde, K. D., Irinyi, L., Jeewon, R., Johnston, P. R., Kirk, P. M., Malosso, E., May, T. W., Meyer, W., Öpik, M. & 7 others, , Jul 2020, In : IMA Fungus. 11, 32 p., 14.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
2019
23 years of research on Teratosphaeria leaf blight of Eucalyptus
Andjic, V., Carnegie, A. J., Pegg, G. S., Hardy, G. E. S. J., Maxwell, A., Crous, P. W., Pérez, C., Wingfield, M. J. & Burgess, T. I., Jul 2019, In : Forest Ecology and Management. 443, p. 19 - 27Research output: Contribution to journal/periodical › Article › Scientific › peer-review
A Comparison of Isolation Methods for Black Fungi Degrading Aromatic Toxins
Quan, Y., van den Ende, B. G., Shi, D., Prenafeta-Boldú, F. X., Liu, Z., Al-Hatmi, A. M. S., Ahmed, S. A., Verweij, P. E., Kang, Y. & de Hoog, S., Oct 2019, In : Mycopathologia. 184, 5, p. 653-660 8 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
A new perspective on fungal metabolites: identification of bioactive compounds from fungi using zebrafish embryogenesis as read-out
Hoeksma, J., Misset, T., Wever, C., Kemmink, J., Kruijtzer, J., Versluis, K., Liskamp, R. M. J., Boons, G. J., Heck, A. J. R., Boekhout, T. & den Hertog, J., 26 Nov 2019, In : Scientific Reports. 9, 1, p. 17546Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Anidulafungin Susceptibility Testing of Candida glabrata Isolates from Blood Cultures by the MALDI Biotyper Antibiotic (Antifungal) Susceptibility Test Rapid Assay
Vatanshenassan, M., Arastehfar, A., Boekhout, T., Berman, J., Lass-Flörl, C., Sparbier, K. & Kostrzewa, M., Sep 2019, In : Antimicrobial Agents and Chemotherapy. 63, 9Research output: Contribution to journal/periodical › Article › Scientific › peer-review
A novel diagnosis scoring model to predict invasive pulmonary aspergillosis in the intensive care unit
Rozaliyani, A., Sedono, R., Jusuf, A., Rumende, C. M., Aniwidyaningsih, W., Burhan, E., Prasenohadi, P., Handayani, D., Yunihastuti, E., Siagian, F. E., Jayusman, A. M., Rusli, A., Sungkar, S., Prihartono, J., Hagen, F., Meis, J. F. & Wahyuningsih, R., Feb 2019, In : Saudi medical journal. 40, 2, p. 140-146 7 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Antifungal susceptibility, genotyping, resistance mechanism, and clinical profile of Candida tropicalis blood isolates
Arastehfar, A., Daneshnia, F., Hafez, A., Khodavaisy, S., Najafzadeh, M-J., Charsizadeh, A., Zarrinfar, H., Salehi, M., Shahrabadi, Z. Z., Sasani, E., Zomorodian, K., Pan, W., Hagen, F., Ilkit, M., Kostrzewa, M. & Boekhout, T., 12 Dec 2019, In : Medical Mycology.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
A Revised Species Concept for Opportunistic Mucor Species Reveals Species-Specific Antifungal Susceptibility Profiles
Wagner, L., de Hoog, S., Alastruey-Izquierdo, A., Voigt, K., Kurzai, O. & Walther, G., Aug 2019, In : Antimicrobial Agents and Chemotherapy. 63, 8Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Athelia rolfsii (= Sclerotium rolfsii) infects banana in the Philippines
Acabal, B. D., Dalisay, T. U., Groenewald, J. Z., Crous, P. W. & Cumagun, C. J. R., Dec 2019, In : Australasian Plant Disease Notes. 14, 1, p. 10 1 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
A tribute to Cletus P. Kurtzman (1938-2017)
Boekhout, T., 01 Aug 2019, In : FEMS Yeast Research. 19, 5Research output: Contribution to journal/periodical › Article › Professional
Azole-Resistance in Aspergillus terreus and Related Species: An Emerging Problem or a Rare Phenomenon? (vol 9, 516, 2018)
Zoran, T., Sartori, B., Sappl, L., Aigner, M., Sanchez-Reus, F., Rezusta, A., Chowdhary, A., Taj-Aldeen, S. J., Arendrup, M. C., Oliveri, S., Kontoyiannis, D. P., Alastruey-Izquierdo, A., Lagrou, K., Lo Cascio, G., Meis, J. F., Buzina, W., Farina, C., Drogari-Apiranthitou, M., Grancini, A., Tortorano, A. M. & 34 others, , 14 Jan 2019, In : Frontiers in Microbiology. 9Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Back to the roots: a reappraisal of Neocosmospora
Sandoval-Denis, M., Lombard, L. & Crous, P. W., Dec 2019, In : Persoonia. 43, p. 90-185 96 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Botryosphaeriaceae associated with Acacia heterophylla (La Réunion) and Acacia koa (Hawaii)
Jami, F., Marincowitz, S., Slippers, B., Crous, P. W., Le Roux, J. J., Richardson, D. M. & Wingfield, M. J., 20 Jul 2019, In : Fungal Biology. 123, 11, p. 783-790 8 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Candida auris Identification and Rapid Antifungal Susceptibility Testing Against Echinocandins by MALDI-TOF MS
Vatanshenassan, M., Boekhout, T., Meis, J. F., Berman, J., Chowdhary, A., Ben-Ami, R., Sparbier, K. & Kostrzewa, M., 18 Feb 2019, In : Frontiers in cellular and infection microbiology. 9, p. 20Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Candida xylosifermentans sp. nov., a D-xylose-fermenting yeast species isolated in Thailand
Kaewwichian, R., Khunnamwong, P., Am-In, S., Jindamorakot, S., Groenewald, M. & Limtong, S., Sep 2019, In : International Journal of Systematic and Evolutionary Microbiology. 69, 9, p. 2674-2680Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Case report: chronic relapsing cryptococcal meningitis in a patient with low mannose-binding lectin and a low naïve CD4 cell count
Wagemakers, A., Ang, C. W., Hagen, F., Bot, J. C. J., Bomers, M. K., Visser, M. C. & van Dijk, K., 15 Oct 2019, In : BMC Infectious Diseases. 19, 1, p. 846Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Changing Concepts and Current Definition of Majocchi's Granuloma
Durdu, M., Kandemir, H., Ilkit, M. & de Hoog, G. S., 11 Jul 2019, In : Mycopathologia.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Changing the game: resolving systematic issues in key Fusarium species complexes
Lombard, L., Sandoval-Denis, M., Cai, L. & Crous, P. W., 18 Dec 2019, In : Persoonia: Molecular Phylogeny and Evolution of Fungi. 43, p. i-ii 2 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Chapter F of the International Code of Nomenclature for algae, fungi, and plants as approved by the 11th International Mycological Congress, San Juan, Puerto Rico, July 2018
May, T. W., Redhead, S. A., Bensch, K., Hawksworth, D. L., Lendemer, J., Lombard, L. & Turland, N. J., Dec 2019, In : IMA Fungus. 10, 1, 14 p., 21.Research output: Contribution to journal/periodical › Article › Professional
Open Access
Chromatin-dependent regulation of secondary metabolite biosynthesis in fungi: is the picture complete?
Collemare, J. & Seidl, M. F., 20 Jun 2019, In : FEMS Microbiology Reviews.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Cinnamic Acid and Sorbic acid Conversion Are Mediated by the Same Transcriptional Regulator in Aspergillus niger
Lubbers, R. J. M., Dilokpimol, A., Navarro, J., Peng, M., Wang, M., Lipzen, A., Ng, V., Grigoriev, I. V., Visser, J., Hildén, K. S. & de Vries, R. P., 2019, In : Frontiers in bioengineering and biotechnology. 7, p. 249Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Clinical insights and epidemiology of central nervous system infection due to Cryptococcus neoformans/gattii species complexes: A prospective study from South India
Lahiri, S., Manjunath, N., Bhat, M., Hagen, F., Bahubali, V. H., Palaniappan, M., Maji, S. & Chandrashekar, N., 03 Oct 2019, In : Medical Mycology.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Colletotrichum species associated with anthracnose of Pyrus spp. in China
Fu, M., Crous, P. W., Bai, Q., Zhang, P. F., Xiang, J., Guo, Y. S., Zhao, F. F., Yang, M. M., Hong, N., Xu, W. X. & Wang, G. P., Jul 2019, In : Persoonia. 42, 1, p. 1-35 35 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Colonies of the fungus Aspergillus niger are highly differentiated to adapt to local carbon source variation
Daly, P., Peng, M., Mitchell, H. D., Kim, Y-M., Ansong, C., Brewer, H., de Gijsel, P., Lipton, M. S., Markillie, L. M., Nicora, C. D., Orr, G., Wiebenga, A., Hildén, K. S., Kabel, M. A., Baker, S. E., Mäkelä, M. R. & de Vries, R. P., 25 Dec 2019, In : Environmental Microbiology.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Community dynamics of Neocallimastigomycetes in the rumen of yak feeding on wheat straw revealed by different primer sets
Wang, X-W., Benoit, I., Groenewald, J. Z., Houbraken, J., Dai, X., Peng, M., Yang, X., Han, D-Y., Gao, C. & Guo, L-D., Oct 2019, In : Fungal Ecology. 41, p. 34 - 44Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Comparative pathogenicity of opportunistic black yeasts in Aureobasidium
Wang, M., Danesi, P., James, T. Y., Al-Hatmi, A. M. S., Najafzadeh, M. J., Dolatabadi, S., Ming, C., Liou, G-Y., Kang, Y. & de Hoog, S., Sep 2019, In : Mycoses. 62, 9, p. 803-811 9 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Comparison of 21-Plex PCR and API 20C AUX, MALDI-TOF MS, and rDNA Sequencing for a Wide Range of Clinically Isolated Yeast Species: Improved Identification by Combining 21-Plex PCR and API 20C AUX as an Alternative Strategy for Developing Countries
Arastehfar, A., Daneshnia, F., Kord, M., Roudbary, M., Zarrinfar, H., Fang, W., Hashemi, S. J., Najafzadeh, M. J., Khodavaisy, S., Pan, W., Liao, W., Badali, H., Rezaie, S., Zomorodian, K., Hagen, F. & Boekhout, T., 2019, In : Frontiers in cellular and infection microbiology. 9, p. 21Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access
Corrigendum: Comparison of 21-Plex PCR and API 20C AUX, MALDI-TOF MS, and rDNA Sequencing for a Wide Range of Clinically Isolated Yeast Species: Improved Identification by Combining 21-Plex PCR and API 20C AUX as an Alternative Strategy for Developing Countries
Arastehfar, A., Daneshnia, F., Kord, M., Roudbary, M., Zarrinfar, H., Fang, W., Hashemi, S. J., Najafzadeh, M. J., Khodavaisy, S., Pan, W., Liao, W., Badali, H., Rezaie, S., Zomorodian, K., Hagen, F. & Boekhout, T., 2019, In : Frontiers in cellular and infection microbiology. 9, p. 176Research output: Contribution to journal/periodical › Article › Scientific
Open Access
Corrigendum: Molecular characterization and antifungal susceptibility testing of Candida nivariensis from blood samples - an Iranian multicentre study and a review of the literature
Arastehfar, A., Daneshnia, F., Salehi, M-R., Zarrinfar, H., Khodavaisy, S., Haas, P-J., Roudbary, M., Najafzadeh, M-J., Zomorodian, K., Charsizadeh, A., Brouwer, C., Pan, W., Hagen, F. & Boekhout, T., Nov 2019, In : Journal of Medical Microbiology. 68, 11, p. 1695Research output: Contribution to journal/periodical › Article › Scientific
Open Access
Corrigendum: Naganishia qatarensis sp. nov., a novel basidiomycetous yeast species from a hypersaline marine environment in Qatar
Fotedar, R., Kolecka, A., Boekhout, T., Fell, J. W., Anand, A., Al Malaki, A., Zeyara, A. & Al Marri, M., Mar 2019, In : International Journal of Systematic and Evolutionary Microbiology. 69, 3, p. 873Research output: Contribution to journal/periodical › Article › Scientific