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2018

Inactivation of stress-resistant ascospores of Eurotiales by industrial sanitizers

Dijksterhuis, J., Meijer, M., van Doorn, T., Samson, R. & Rico-Munoz, E., 20 Nov 2018, In : International Journal of Food Microbiology. 285, p. 27-33 7 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Indoor wet cells as a habitat for melanized fungi, opportunistic pathogens on humans and other vertebrates

Wang, X., Cai, W., Van Den Ende, A. H. G. G., Zhang, J., Xie, T., Xi, L., Li, X., Sun, J. & De Hoog, S., 01 Dec 2018, In : Scientific Reports. 8, 1

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Induction of Genes Encoding Plant Cell Wall-Degrading Carbohydrate-Active Enzymes by Lignocellulose-Derived Monosaccharides and Cellobiose in the White-Rot Fungus Dichomitus squalens

Lopez, S. C., Peng, M., Issak, T. Y., Daly, P., de Vries, R. P. & Makela, M. R., Jun 2018, In : Applied and Environmental Microbiology. 84, 11

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

In Silico Analysis of Putative Sugar Transporter Genes in Aspergillus niger Using Phylogeny and Comparative Transcriptomics

Peng, M., Aguilar-Pontes, M. V., de Vries, R. P. & Makela, M. R., 18 May 2018, In : Frontiers in Microbiology. 9

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Internal validation of GPS MONODOSE CanAur dtec-qPCR kit following the UNE/EN ISO/IEC 17025:2005 for detection of the emerging yeast Candida auris

Martínez-Murcia, A., Navarro, A., Bru, G., Chowdhary, A., Hagen, F. & Meis, J. F., Nov 2018, In : Mycoses. 61, 11, p. 877-884 8 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Introduction: Overview of Fungal Genomics

de Vries, R. P., Grigoriev, I. V. & Tsang, A., 2018, In : Methods in Molecular Biology. 1775, p. 1-7 7 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Invasive Infections due to: Species Distribution, Genotyping, and Antifungal Susceptibilities from a Multi-center Study in China

Guo, L-N., Yu, S-Y., Hsueh, P-R., Al-Hatmi, A. M. S., Meis, J. F., Hagen, F., Xiao, M., Wang, H., Barresi, C., Zhou, M-L., de Hoog, G. S. & Xu, Y-C., 21 Nov 2018, In : Journal of Clinical Microbiology.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section Nigri

Vesth, T. C., Nybo, J. L., Theobald, S., Frisvad, J. C., Larsen, T. O., Nielsen, K. F., Hoof, J. B., Brandl, J., Salamov, A., Riley, R., Gladden, J. M., Phatale, P., Nielsen, M. T., Lyhne, E. K., Kogle, M. E., Strasser, K., McDonnell, E., Barry, K., Clum, A., Chen, C. & 19 others, LaButti, K., Haridas, S., Nolan, M., Sandor, L., Kuo, A., Lipzen, A., Hainaut, M., Drula, E., Tsang, A., Magnuson, J. K., Henrissat, B., Wiebenga, A., Simmons, B. A., Makela, M. R., de Vries, R. P., Grigoriev, I. V., Mortensen, U. H., Baker, S. E. & Andersen, M. R., Dec 2018, In : Nature Genetics. 50, 12, p. 1688-+

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

In vitro activities of antifungal drugs against environmental Exophiala isolates and review of the literature

Gülmez, D., Doğan, Ö., Boral, B., Döğen, A., İlkit, M., de Hoog, G. S. & Arikan-Akdagli, S., 01 Aug 2018, In : Mycoses. 61, 8, p. 561-569 9 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

In vitro antifungal activity of amphotericin B and 11 comparators against Aspergillus terreus species complex

Vaezi, A., Fakhim, H., Arastehfar, A., Shokohi, T., Hedayati, M. T., Khodavaisy, S., Rezaei-Matehkolaei, A., Badiee, P., Hagen, F., Lass-Flörl, C., Dannaoui, E., Meis, J. F. & Badali, H., Feb 2018, In : Mycoses. 61, 2, p. 134-142 9 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Itraconazole, Voriconazole, and Posaconazole CLSI MIC Distributions for Wild-Type and Azole-Resistant Isolates

Buil, J. B., Hagen, F., Chowdhary, A., Verweij, P. E. & Meis, J. F., 29 Aug 2018, In : Journal of Fungi. 4, 3

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Liberomyces pistaciae sp. nov., the causal agent of pistachio cankers and decline in Italy

Vitale, S., Aiello, D., Guarnaccia, V., Luongo, L., Galli, M., Crous, P. W., Polizzi, G., Belisario, A. & Voglmayr, H., 18 Sep 2018, In : MycoKeys. 40, p. 29-51 23 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Low-Cost Tetraplex PCR for the Global Spreading Multi-Drug Resistant Fungus, and Its Phylogenetic Relatives

Arastehfar, A., Fang, W., Badali, H., Vaezi, A., Jiang, W., Liao, W., Pan, W., Hagen, F. & Boekhout, T., 2018, In : Frontiers in Microbiology. 9, p. 1119

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Malassezia ecology, pathophysiology, and treatment

Theelen, B., Cafarchia, C., Gaitanis, G., Bassukas, I. D., Boekhout, T. & Dawson Jr, T. L., 10 Mar 2018, In : Medical Mycology. 56, suppl_1, p. S10-S25

Research output: Contribution to journal/periodicalArticleScientificpeer-review

MALDI-TOF MS as a tool to identify foodborne yeasts and yeast-like fungi

Quintilla, R., Kolecka, A., Casaregola, S., Daniel, H-M., Houbraken, J., Kostrzewa, M., Boekhout, T. & Groenewald, M., 2018, In : International Journal of Food Microbiology. 266, p. 109-118 10 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Medische mycologie in 2018

Verweij, P. E., de Hoog, S., Hagen, F., van de Sande, W. W. J. & Meis, J. F. G. M., Mar 2018, In : Nederlands Tijdschrift voor Medische Microbiologie . 26, 1, p. 37 44 p.

Research output: Contribution to journal/periodicalArticleProfessional

Open Access

Melanospora (Sordariomycetes, Ascomycota) and its relatives

Marin-Felix, Y., Guarro, J., Cano-Lira, J. F., García, D., Miller, A. N. & Stchigel, A. M., 18 Dec 2018, In : MycoKeys. 44, p. 81-122 42 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Misidentification of genome assemblies in public databases: the case of Naumovozyma dairenensis and proposal of a protocol to correct misidentifications

Stavrou, A. A., Mixão, V., Boekhout, T. & Gabaldón, T., 10 Jan 2018, In : Yeast (Chichester, England). doi/10.1002/yea.3303.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Molecular characterization and antifungal susceptibility testing of Cryptococcus neoformans sensu stricto from southern Brazil

Herkert, P. F., Meis, J. F., Lucca de Oliveira Salvador, G., Rodrigues Gomes, R., Aparecida Vicente, V., Dominguez Muro, M., Lameira Pinheiro, R., Lopes Colombo, A., Vargas Schwarzbold, A., Sakuma de Oliveira, C., Simão Ferreira, M., Queiroz-Telles, F. & Hagen, F., Apr 2018, In : Journal of Medical Microbiology. 67, 4, p. 560-569 10 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Molecular Characterization and Antifungal Susceptibility Testing of Sequentially Obtained Clinical Cryptococcus deneoformans and Cryptococcus neoformans Isolates from Ljubljana, Slovenia

Tomazin, R., Matos, T., Meis, J. F. & Hagen, F., Apr 2018, In : Mycopathologia. 183, 2, p. 371-380 10 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Molecular Diagnostics of Arthroconidial Yeasts, Frequent Pulmonary Opportunists

Kaplan, E., Al-Hatmi, A. M. S., Ilkit, M., Gerrits van den Ende, A. H. G., Hagen, F., Meis, J. F. & de Hoog, G. S., Jan 2018, In : Journal of Clinical Microbiology. 56, 1

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Molecular epidemiology of environmental Cryptococcus species isolates based on amplified fragment length polymorphism

Pakshir, K., Fakhim, H., Vaezi, A., Meis, J. F., Mahmoodi, M., Zomorodian, K., Javidnia, J., Ansari, S., Hagen, F. & Badali, H., Dec 2018, In : Journal de Mycologie Médicale. 28, 4, p. 599-605 7 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Multi-locus phylogeny and taxonomy of Exserohilum

Hernandez Restrepo, M. I., Madrid, H., Tan, Y. P., da Cunha, K. C., Gene, J., Guarro, J. & Crous, P. W., Dec 2018, In : Persoonia: Molecular Phylogeny and Evolution of Fungi. 41, p. 71-108

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Mycological Diversity Description I

Bezerra, J. D. P., Machado, A. R., Firmino, A. L., Rosado, A. W. C., Souza, C. A. F. D., Souza-Motta, C. M. D., Freire, K. T. L. D. S., Paiva, L. M., Magalhã, O. M. C., Pereira, O. L., Crous, P. W., Oliveira, T. G. L. D., Abreu, V. P. D. & Fan, X., Oct 2018, In : Acta Botanica Brasilica. 32, 4, p. 656-666

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Mycotic Keratitis Caused by Fusarium solani sensu stricto (FSSC5): A Case Series

Boral, H., Van Diepeningen, A., Erdem, E., Yağmur, M., De Hoog, G. S., Ilkit, M., Meis, J. F. & Al-hatmi, A. M. S., 01 Oct 2018, In : Mycopathologia. 183, 5, p. 835-840

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Naganishia qatarensis sp. nov., a novel basidiomycetous yeast species from a hypersaline marine environment in Qatar

Fotedar, R., Kolecka, A., Boekhout, T., Fell, J. W., Anand, A., Al Malaki, A., Zeyara, A. & Al Marri, M., Sep 2018, In : International Journal of Systematic and Evolutionary Microbiology. 68, 9, p. 2924-2929 6 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Neocosmospora perseae sp. nov., causing trunk cankers on avocado in Italy

Guarnaccia, V., Sandoval-Denis, M., Aiello, D., Polizzi, G. & Crous, P. W., 26 Mar 2018, In : Fungal Systematics and Evolution. 1, p. 131-140

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

New and Interesting Fungi. 1

Crous, P. W., Schumacher, R. K., Wingfield, M. J., Akulov, A., Denman, S., Roux, J., Braun, U., Burgess, T. I., Carnegie, A. J., Váczy, K. Z., Guatimosim, E., Schwartsburd, P. B., Barreto, R. W., Hernandez Restrepo, M. I., Lombard, L. & Groenewald, J. Z., 18 Apr 2018, In : Fungal Systematics and Evolution. 1, p. 169-215

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

New Fusarium species from the Kruger National Park, South Africa

Sandoval-Denis, M., Swart, W. J. & Crous, P. W., 01 Jun 2018, In : MycoKeys. 34, p. 63-92 30 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

New insights in dermatophyte research

Gräser, Y., Monod, M., Bouchara, J. P., Dukik, K., Nenoff, P., Kargl, A., Kupsch, C., Zhan, P., Packeu, A., Chaturvedi, V. & De Hoog, S., 01 Apr 2018, In : Medical Mycology. 56, p. S2-S9

Research output: Contribution to journal/periodicalArticleScientificpeer-review

New nematicidal and antimicrobial secondary metabolites from a new species in the new genus, Pseudobambusicola thailandica

Rupcic, Z., Chepkirui, C., Hernandez-Restrepo, M., Crous, P. W., Luangsa-ard, J. J. & Stadler, M., 22 Mar 2018, In : MycoKeys. 33, p. 1-23

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

New Penicillium and Talaromyces species from honey, pollen and nests of stingless bees

Barbosa, R. N., Bezerra, J. D. P., Souza-Motta, C. M., Frisvad, J. C., Samson, R. A., Oliveira, N. T. & Houbraken, J., Oct 2018, In : Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology. 111, 10, p. 1883-1912

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

New species of Cylindrocladiella from plantation soils in South-East Asia

Pham, N. Q., Barnes, I., Chen, S., Pham, T. Q., Lombard, L., Crous, P. W. & Wingfield, M. J., 15 Mar 2018, In : MycoKeys. 32, p. 1-24 24 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

NGS barcode sequencing in taxonomy and diagnostics, an application in "Candida" pathogenic yeasts with a metagenomic perspective

Colabella, C., Corte, L., Roscini, L., Bassetti, M., Mellor, J. C., Meyer, W., Robert, V. A. R. G., Vu, D. & Cardinali, G., 09 Jun 2018, In : IMA Fungus. p. 91-105 15 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Nigrograna mackinnonii, not Trematosphaeria grisea (syn., Madurella grisea), is the main agent of black grain eumycetoma in Latin America

Ahmed, S. A., González, G. M., Tirado-Sánchez, A., Moreno-López, L. M., De Hoog, S. & Bonifaz, A., 01 Mar 2018, In : Journal of Clinical Microbiology. 56, 3

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Novel primers improve species delimitation in Cercospora

Bakhshi, M., Arzanlou, M., Babai-Ahari, A., Groenewald, J. Z. & Crous, P. W., 26 Sep 2018, In : IMA Fungus. 9, 2, p. 299-332

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

On the origin of vanillyl alcohol oxidases

Gygli, G., de Vries, R. P. & van Berkel, W. J. H., Jul 2018, In : Fungal Genetics and Biology. 116, p. 24-32

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Paraphoma chlamydocopiosa sp. nov. and Paraphoma pye sp. nov., two new species associated with leaf and crown infection of pyrethrum

Moslemi, A., Ades, P. K., Crous, P. W., Groom, T., Scott, J. B., Nicolas, M. E. & Taylor, P. W. J., Jan 2018, In : Plant Pathology. 67, 1, p. 124-135 12 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Penicillium hermansii, a new species causing smoky mould in white button mushroom production

Houbraken, J., Seifert, K. A. & Samson, R. A., 2018, In : Mycological Progress. 18, 1-2, p. 229-236 8 p., https://doi.org/10.1007/s11557-018-1407-4.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Penicillium section Lanata-divaricata from acidic soil

Diao, Y-Z., Chen, Q., Jiang, X-Z., Houbraken, J., Barbosa, R. N., Cai, L. & Wu, W-P., 19 Dec 2018, In : Cladistics. 0, 0, p. 1-36 36 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Phylogeny and taxonomy of the genus Tubakia s. lat.

Braun, U., Nakashima, C., Crous, P. W., Groenewald, E., Moreno-Rico, O., Rooney-Latham, S., Blomquist, C. L., Haas, J. & Marmolejo, J., 01 Mar 2018, In : Fungal Systematics and Evolution. 1, p. 41-99

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Phylogeny of dermatophytes with genomic character evaluation of clinically distinct Trichophyton rubrum and T. violaceum

Zhan, P., Dukik, K., Li, D., Sun, J., Stielow, J. B., Gerrits van den Ende, B., Brankovics, B., Menken, S. B. J., Mei, H., Bao, W., Lv, G., Liu, W. & de Hoog, G. S., 01 Mar 2018, In : Studies in Mycology. 89, p. 153-175 23 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Physiological background of the remarkably high Cd2+ tolerance of the Aspergillus fumigatus Af293 strain

Kurucz, V., Kiss, B., Szigeti, Z. M., Nagy, G., Orosz, E., Hargitai, Z., Harangi, S., Wiebenga, A., de Vries, R. P., Pocsi, I. & Emri, T., Nov 2018, In : Journal of Basic Microbiology. 58, 11, p. 957-967

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Polyphasic data support the splitting of Aspergillus candidus into two species; proposal of Aspergillus dobrogensis sp nov.

Hubka, V., Novakova, A., Jurjevic, Z., Sklenar, F., Frisvad, J. C., Houbraken, J., Arendrup, M. C., Jorgensen, K. M., Sigueira, J. P. Z., Gene, J. & Kolarik, M., Apr 2018, In : International Journal of Systematic and Evolutionary Microbiology. 68, 4, p. 995-1011

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Post-influenzal triazole-resistant aspergillosis following allogeneic stem cell transplantation

Talento, A. F., Dunne, K., Murphy, N., O'Connell, B., Chan, G., Joyce, E. A., Hagen, F., Meis, J. F., Fahy, R., Bacon, L., Vandenberge, E. & Rogers, T. R., Aug 2018, In : Mycoses. 61, 8, p. 570-575 6 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Prevalence and characterization of azole-resistant Aspergillus fumigatus in patients with cystic fibrosis: a prospective multicentre study in Germany

Seufert, R., Sedlacek, L., Kahl, B., Hogardt, M., Hamprecht, A., Haase, G., Gunzer, F., Haas, A., Grauling-Halama, S., MacKenzie, C. R., Essig, A., Stehling, F., Sutharsan, S., Dittmer, S., Killengray, D., Schmidt, D., Eskandarian, N., Steinmann, E., Buer, J., Hagen, F. & 3 others, Meis, J. F., Rath, P-M. & Steinmann, J., 01 Aug 2018, In : Journal of Antimicrobial Chemotherapy. 73, 8, p. 2047-2053 7 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Prevalence and diversity of filamentous fungi in the airways of cystic fibrosis patients - A Dutch, multicentre study

01 Dec 2018, In : Journal of Cystic Fibrosis.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Prevalence of low inflammatory tinea genitalis in southern China

Yin, S., Xie, X., Li, M., Zhou, X., Wei, L., Chen, Z., Chen, J., Lu, C., De Hoog, S., Lai, W. & Feng, P., 11 Oct 2018, In : Mycoses.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Profiling of volatile organic compounds produced by clinical Aspergillus isolates using gas chromatography-mass spectrometry.

Gerritsen, MG., Brinkman, P., Escobar Salazar, N., Bos, LD., de Heer, K., Meijer, M., Janssen, H-G., de Cock, H., Wösten, H. A. B., Visser, C. E., van Oers, MHJ. & Sterk, PJ., 01 Feb 2018, In : Medical Mycology. 56, 2, p. 253 256 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Proof of Concept for MBT ASTRA, a Rapid Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS)-Based Method To Detect Caspofungin Resistance in Candida albicans and Candida glabrata

Vatanshenassan, M., Boekhout, T., Lass-Flörl, C., Lackner, M., Schubert, S., Kostrzewa, M. & Sparbier, K., Sep 2018, In : Journal of Clinical Microbiology. 56, 9

Research output: Contribution to journal/periodicalArticleScientificpeer-review