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2018

Proteins Potentially Involved in Immune Evasion Strategies in Sporothrix brasiliensis Elucidated by Ultra-High-Resolution Mass Spectrometry

Bahn, Y-S. (ed.), Rossato, L., Moreno, L. F., Jamalian, A., Stielow, B., de Almeida, S. R., de Hoog, S. & Freeke, J., 13 Jun 2018, In : mSphere. 3, 3

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Removing chaos from confusion: assigning names to common human and animal pathogens in Neocosmospora

Sandoval-Denis, M. & Crous, P. W., 04 Apr 2018, In : Persoonia: Molecular Phylogeny and Evolution of Fungi. 41, p. 109-129

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Revision of the medically relevant species of the yeast genus Diutina

Ming, C., Huang, J., Wang, Y., Lv, Q., Zhou, B., Liu, T., Cao, Y., Gerrits van den Ende, B., Al-Hatmi, A. M. S., Ahmed, S. A., Huang, G., Bai, F., de Hoog, S. & Kang, Y., 03 Apr 2018, In : Medical Mycology.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Scedosporium and Lomentospora: An updated overview of underrated opportunists

Ramirez-Garcia, A., Pellon, A., Rementeria, A., Buldain, I., Barreto-Bergter, E., Rollin-Pinheiro, R., De Meirelles, J. V., Xisto, M. I. D. S., Ranque, S., Havlicek, V., Vandeputte, P., Govic, Y. L., Bouchara, J. P., Giraud, S., Chen, S., Rainer, J., Alastruey-Izquierdo, A., Martin-Gomez, M. T., López-Soria, L. M., Peman, J. & 12 others, Schwarz, C., Bernhardt, A., Tintelnot, K., Capilla, J., Martin-Vicente, A., Cano-Lira, J., Nagl, M., Lackner, M., Irinyi, L., Meyer, W., De Hoog, S. & Hernando, F. L., 01 Apr 2018, In : Medical Mycology. 56, p. S102-S125

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Seiridium (Sporocadaceae): an important genus of plant pathogenic fungi

Bonthond, G., Sandoval-Denis, M., Groenewald, J. Z. & Crous, P. W., 09 Jan 2018, In : Persoonia: Molecular Phylogeny and Evolution of Fungi. 40, p. 96-118

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Selective Cleavage of Lignin beta-O-4 Aryl Ether Bond by beta-Etherase of the White-Rot Fungus Dichomitus squalens

Marinovic, M., Nousiainen, P., Dilokpimol, A., Kontro, J., Moore, R., Sipila, J., de Vries, R. P., Makela, M. R. & Hilden, K., Mar 2018, In : ACS Sustainable Chemistry & Engineering. 6, 3, p. 2878-2882

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Species of Diaporthe on Camellia and Citrus in the Azores Islands

GUARNACCIA, V. & CROUS, P., 17 Sep 2018, In : Phytopathologia Mediterranea. 57, 2, p. 307-319

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Sporotrichosis between 1898 and 2017: The evolution of knowledge on a changeable disease and on emerging etiological agents.

Lopes-Bezerra, L. M., Mora-Montes, H. M., Zhang, Y., Nino-Vega, G., Rodrigues, A. M., De Camargo, Z. P. & De Hoog, S., 01 Apr 2018, In : Medical Mycology. 56, p. S126-S143

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Symptomatic Citrus trees reveal a new pathogenic lineage in Fusarium and two new Neocosmospora species

Sandoval-Denis, M., Guarnaccia, V., Polizzi, G. & Crous, P. W., Jun 2018, In : Persoonia: Molecular Phylogeny and Evolution of Fungi. 40, p. 1-25

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Talaromyces borbonicus, sp. nov., a novel fungus from biodegraded Arundo donax with potential abilities in lignocellulose conversion.

Varriale, S., Houbraken, J., Granchi, Z., Pepe, O., Cerullo, G., Ventorino, V., Chin-A-Woeng, T., Meijer, M., Riley, R., Grigoriev, I. V., Henrissat, B., de Vries, R. P. & Faraco, V., 27 May 2018, In : Mycologia. p. 316 324 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Tempo and Mode of Genome Evolution in the Budding Yeast Subphylum

Shen, X-X., Opulente, D. A., Kominek, J., Zhou, X., Steenwyk, J. L., Buh, K. V., Haase, M. A. B., Wisecaver, J. H., Wang, M., Doering, D. T., Boudouris, J. T., Schneider, R. M., Langdon, Q. K., Ohkuma, M., Endoh, R., Takashima, M., Manabe, R., Čadež, N., Libkind, D., Rosa, C. A. & 6 others, DeVirgilio, J., Hulfachor, A. B., Groenewald, M., Kurtzman, C. P., Hittinger, C. T. & Rokas, A., 08 Nov 2018, In : Cell. 175, 6, p. 1533 - 1545.e20

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Temporal microbiota and biochemical profiles during production and ripening of Divle Cave cheese

Ozturkoglu-Budak, S., Aykas, D. P., Kocak, C., Donmez, S., Gursoy, A., De Vries, R. P. & Bron, P. A., Mar 2018, In : International Journal of Dairy Technology. 71, p. 99-106

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Temporal transcriptome analysis of the white-rot fungus Obba rivulosa shows expression of a constitutive set of plant cell wall degradation targeted genes during growth on solid spruce wood

Marinović, M., Aguilar-Pontes, M. V., Zhou, M., Miettinen, O., de Vries, R. P., Mäkelä, M. R. & Hildén, K., Mar 2018, In : Fungal Genetics and Biology. 112, p. 47-54

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Ten reasons why a sequence-based nomenclature is not useful for fungi anytime soon

Thines, M., Crous, P. W., Aime, M. C., Aoki, T., Cai, L., Hyde, K. D., Miller, A. N., Zhang, N. & Stadler, M., 30 Jun 2018, In : IMA Fungus. 9, 1, p. 177-183 7 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

The 'forma specialis' issue in Fusarium: A case study in Fusarium solani f. sp. pisi

Šišić, A., Baćanović-Šišić, J., Al-Hatmi, A. M. S., Karlovsky, P., Ahmed, S. A., Maier, W., De Hoog, G. S. & Finckh, M. R., 01 Dec 2018, In : Scientific Reports. 8, 1

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

The fungus Aspergillus niger consumes sugars in a sequential manner that is not mediated by the carbon catabolite repressor CreA

Makela, M. R., Aguilar-Pontes, M. V., van Rossen-Uffink, D., Peng, M. & de Vries, R. P., 27 Apr 2018, In : Scientific Reports. 8

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

The global catalogue of microorganisms 10K type strain sequencing project: closing the genomic gaps for the validly published prokaryotic and fungi species

Wu, L., McCluskey, K., Desmeth, P., Liu, S., Hideaki, S., Yin, Y., Moriya, O., Itoh, T., Kim, C. Y., Lee, J-S., Zhou, Y., Kawasaki, H., Hazbón, M. H., Robert, V., Boekhout, T., Lima, N., Evtushenko, L., Boundy-Mills, K., Bunk, B., Moore, E. R. B. & 13 others, Eurwilaichitr, L., Ingsriswang, S., Shah, H., Yao, S., Jin, T., Huang, J., Shi, W., Sun, Q., Fan, G., Li, W., Li, X., Kurtböke, I. & Ma, J., 01 May 2018, In : GigaScience. 7, 5

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

The gold-standard genome of Aspergillus niger NRRL 3 enables a detailed view of the diversity of sugar catabolism in fungi

de Vries, R. P., Aguilar-Pontes, M. V., Brandl, J., McDonnell, E., Strasser, K., Riley, R., Mondo, S. J., Salamov, A., Nybo, J. L., Vesth, T. C., Grigoriev, I. V., Andersen, M. R. & Tsang, A., 2018, In : Studies in Mycology. 91, p. 61-78

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

The obligate alkalophilic soda-lake fungus Sodiomyces alkalinus has shifted to a protein diet

Grum-Grzhimaylo, A. A., Falkoski, D. L., van den Heuvel, J., Valero-Jimenez, C. A., Min, B., Choi, I-G., Lipzen, A., Daum, C. G., Aanen, D. K., Tsang, A., Henrissat, B., Bilanenko, E. N., de Vries, R. P., van Kan, J. A. L., Grigoriev, I. V. & Debets, A. J. M., Dec 2018, In : Molecular Ecology. 27, 23, p. 4808-4819

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

The physiology of Agaricus bisporus in semi-commercial compost cultivation appears to be highly conserved among unrelated isolates

Pontes, M. V. A., Patyshakuliyeva, A., Post, H., Jurak, E., Hilden, K., Altelaar, M., Heck, A., Kabel, M. A., de Vries, R. P. & Makela, M. R., Mar 2018, In : Fungal Genetics and Biology. 112, p. 12-20

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

The Protean Acremonium. A. sclerotigenum/egyptiacum: Revision, Food Contaminant, and Human Disease

Summerbell, R. C., Gueidan, C., Guarro, J., Eskalen, A., Crous, P. W., Gupta, A. K., Gené, J., Cano-Lira, J. F., van Iperen, A., Starink, M. & Scott, J. A., 16 Aug 2018, In : Microorganisms. 6, 3, p. 1-21 88.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

The Synthetic Potential of Fungal Feruloyl Esterases: A Correlation with Current Classification Systems and Predicted Structural Properties

Antonopoulou, I., Dilokpimol, A., Iancu, L., Makela, M. R., Varriale, S., Cerullo, G., Huttner, S., Uthoff, S., Juetten, P., Piechot, A., Steinbuechel, A., Olsson, L., Faraco, V., Hilden, K. S., de Vries, R. P., Rova, U. & Christakopoulos, P., Jun 2018, In : Catalysts. 8, 6

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

The world's ten most feared fungi

Hyde, K. D., Al-Hatmi, A. M. S., Andersen, B., Boekhout, T., Buzina, W., Dawson, T. L. . J., Eastwood, D. C., Jones, E. B. G., de Hoog, S., Kang, Y., Longcore, J. E., McKenzie, E. H. C., Meis, J. F., Pinson-Gadais, L., Rathnayaka, A. R., Richard-Forget, F., Stadler, M., Theelen, B., Thongbai, B. & Tsui, C. K. M., Nov 2018, In : Fungal Diversity. 93, 1, p. 161-194

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Topographically triggered mycelial bundles in Acremonium and Fusarium species

Ingham, C. J., Dijksterhuis, J. & Caton, L., 01 Feb 2018, In : Gewasbescherming. 48, 4/5/6, p. 118 1 p.

Research output: Contribution to journal/periodicalArticlePopularizing

Two new species of the Fusarium solani species complex isolated from compost and hibiscus (Hibiscus sp.)

Šišić, A., Al-Hatmi, A. M. S., Baćanović-Šišić, J., Ahmed, S. A., Dennenmoser, D., de Hoog, G. S. & Finckh, M. R., 01 Oct 2018, In : Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology. 111, 10, p. 1785-1805 21 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Ultra-high-resolution mass spectrometry for identification of closely related dermatophytes with different clinical predilections

Dukik, K., Freeke, J., Jamalian, A., Van Den Ende, B. G., Yip, P., Stephenson, J. L., De Hoog, G. S. & Stielow, J. B., 01 Jul 2018, In : Journal of Clinical Microbiology. 56, 7

Research output: Contribution to journal/periodicalArticleScientificpeer-review

XI International Mycological Congress: report of Congress action on nomenclature proposals relating to fungi

May, T. W., Redhead, S. A., Lombard, L. & Rossman, A. Y., 09 Nov 2018, In : IMA Fungus. 9, 2, p. xxii-xxvii

Research output: Contribution to journal/periodicalArticleProfessional

Open Access

Yeast Biofilm as a Bridge Between Medical and Environmental Microbiology Across Different Detection Techniques

Roscini, L., Vassiliou, A., Corte, L., Casagrande Pierantoni, D., Robert, V., Tascini, C., Mattana, S., Alunni Cardinali, M., Orfanos, S. E., Fioretto, D. & Cardinali, G., Mar 2018, In : Infectious Diseases and Therapy. 7, Suppl 1, p. 27-34 8 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

YEAST PANEL multiplex PCR for identification of clinically important yeast species: stepwise diagnostic strategy, useful for developing countries

Arastehfar, A., Fang, W., Pan, W., Lackner, M., Liao, W., Badiee, P., Zomorodian, K., Badali, H., Hagen, F., Lass-Flörl, C. & Boekhout, T., 21 Sep 2018, In : Diagnostic Microbiology and Infectious Disease.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
2017

(2517-2519) Proposals to conserve the names Balansia claviceps against Ephelis mexicana, Claviceps paspali against Ustilagopsis deliquescens, and Tolypocladium inflatum against Cordyceps subsessilis (Ascomycota: Sordariomycetes: Hypocreales)

Rossman, A. Y., Allen, W. C., Castlebury, L. A., Spatafora, J. W., Romero, A. I. & Verkley, G., 23 Jun 2017, In : Taxon. 66, 3, p. 749-U273

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

A mobile pathogenicity chromosome in Fusarium oxysporum for infection of multiple cucurbit species

van Dam, P., Fokkens, L., Ayukawa, Y., van der Gragt, M., ter Horst, A., Brankovics, B., Houterman, P. M., Arie, T. & Rep, M., 22 Aug 2017, In : Scientific Reports. 7, 1, 15 p., 9042.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

A novel dimorphic pathogen, Emergomyces orientalis (Onygenales), agent of disseminated infection

2017, In : Mycoses.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

A novel species of the oligotrophic genus Ochroconis colonizing indoor wet cells

Samerpitak, K., Gloyna, K., Gerrits van den Ende, B. & de Hoog, S., Jul 2017, In : Mycoscience. 58, 4, p. 290-296

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Antifungal susceptibility testing of Candida species isolated from the immunocompromised patients admitted to ten university hospitals in Iran: comparison of colonizing and infecting isolates

Badiee, P., Badali, H., Boekhout, T., Diba, K., Moghadam, A. G., Hossaini Nasab, A., Jafarian, H., Mohammadi, R., Mirhendi, H., Najafzadeh, M. J., Shamsizadeh, A. & Soltani, J., 21 Nov 2017, In : BMC Infectious Diseases. 17, 1, p. 727

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

A prospective international Aspergillus terreus survey: an EFISG, ISHAM and ECMM joint study

Risslegger, B., Zoran, T., Lackner, M., Mach-Aigner, A. R., Sanchez-Reus, F., Rezusta, A., Chowdhary, A., Taj-Aldeen, S. J., Arendrup, M. C., Oliveri, S., Kontoyiannis, D. P., Alastruey-Izquierdo, A., Lagrou, K., Lo Cascio, G., Meis, J. F., Buzina, W., Farina, C., Drogari-Apiranthitou, M., Grancini, A., Tortorano, A. M. & 31 others, Willinger, B., Hamprecht, A., Johnson, A. E., Klingspor, L., Arsic Arsenijevic, V., Cornely, O. A., Meletiadis, J., Prammer, W., Tullio, V., Vehreschild, J. J., Trovato, L., Lewis, R. E., Segal, E., Rath, P-M., Hamal, P., Rodriguez-Iglesias, M., Roilides, E., Arikan-Akdagli, S., Chakrabarti, A., Colombo, A. L., Fernandez, M. S., Martin-Gomez, M. T., Badali, H., Petrikkos, G., Klimko, N., Heimann, S. M., Houbraken, J., Uzun, O., Edlinger, M., de la Fuente, S. & Lass-Floerl, C., Oct 2017, In : Clinical Microbiology and Infection. 23, 10, p. 776E1-776E5

Research output: Contribution to journal/periodicalArticleScientificpeer-review

ARA1 regulates not only l-arabinose but also d-galactose catabolism in Trichoderma reesei

Benocci, T., Aguilar-Pontes, M. V., Kun, R. S., Seiboth, B., de Vries, R. P. & Daly, P., 07 Dec 2017, In : FEBS Letters.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Aspergillus penicillioides differentiation and cell division at 0.585 water activity

Stevenson, A., Hamill, P. G., O'Kane, C. J., Kminek, G., Rummel, J. D., Voytek, M. A., Dijksterhuis, J. & Hallsworth, J. E., Feb 2017, In : Environmental Microbiology. 19, 2, p. 687-697

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Assemblages of fungi associated with cork oak forests in northwestern Tunisia

Ben Ali, M. B. H., Boekhout, T. & Thorn, R. G., 2017, In : Nova Hedwigia. 105, 1-2, p. 121-134

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Bakkersgist, Saccharomyces cervisiae

Boekhout, T. & Groenewald, M., 2017, In : Cahiers Biowetenschappen en Maatschappij. 36, 4, p. 65-68

Research output: Contribution to journal/periodicalArticleProfessional

Bezerromycetales and Wiesneriomycetales ord. nov. (class Dothideomycetes), with two novel genera to accommodate endophytic fungi from Brazilian cactus

Bezerra, J. D. P., Oliveira, R. J. V., Paiva, L. M., Silva, G. A., Groenewald, J. Z., Crous, P. W. & Souza-Motta, C. M., Apr 2017, In : Mycological Progress. 16, 4, p. 297-309 13 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Biodiversity and human-pathogenicity of Phialophora verrucosa and relatives in Chaetothyriales

01 Jun 2017, In : Persoonia. p. 1-19

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Blood culture procedures and diagnosis of Malassezia furfur bloodstream infections: Strength and weakness

Iatta, R., Battista, M., Miragliotta, G., Boekhout, T., Otranto, D. & Cafarchia, C., 27 Dec 2017, In : Medical Mycology.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Botryosphaeriaceae: Systematics, pathology, and genetics

Crous, P. W., Slippers, B., Groenewald, J. Z. & Wingfield, M. J., Apr 2017, In : Fungal Biology. 121, 4, p. 305-306 2 p.

Research output: Contribution to journal/periodicalArticleProfessional

Botryosphaeria dothidea: a latent pathogen of global importance to woody plant health

Marsberg, A., Kemler, M., Jami, F., Nagel, J. H., Postma-Smidt, A., Naidoo, S., Wingfield, M. J., Crous, P. W., Spatafora, J. W., Hesse, C. N., Robbertse, B. & Slippers, B., May 2017, In : Molecular Plant Pathology. 18, 4, p. 477-488 12 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Calonectria species isolated from Eucalyptus plantations and nurseries in South China

Li, J., Wingfield, M. J., Liu, Q., Barnes, I., Roux, J., Lombard, L., Crous, P. W. & Chen, S., Dec 2017, In : IMA Fungus. 8, 2, p. 259-294 36 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Calycofera gen. nov an estuarine sister taxon to Phytopythium, Peronosporaceae

Bennett, R. M., de Cock, A. W. A. M., Lévesque, C. A. & Thines, M., 01 Oct 2017, In : Mycological Progress. 16, 10, p. 947-954 8 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Candida infanticola and Candida spencermartinsiae yeasts: Possible emerging species in cancer patients

Shokohi, T., Aslani, N., Ahangarkani, F., Meyabadi, M. F., Hagen, F., Meis, J. F., Boekhout, T., Kolecka, A. & Badali, H., 29 Dec 2017, In : Microbial Pathogenesis. 115, p. 353-357 5 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Candida parapsilosis in domestic laundry machines

Doguen, A., Sav, H., Gonca, S., Kaplan, E., Ilkit, M., Babic, M. N., Gunde-Cimerman, N. & de Hoog, G. S., Nov 2017, In : Medical Mycology. 55, 8, p. 813-819

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Cephalotrichum and related synnematous fungi with notes on species from the built environment

Woudenberg, J. H. C., Sandoval-Denis, M., Houbraken, J., Seifert, K. A. & Samson, R. A., Sep 2017, In : Studies in Mycology. 88, p. 137-159

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Characterisation of three fungal glucuronoyl esterases on glucuronic acid ester model compounds

Huttner, S., Klaubauf, S., de Vries, R. P. & Olsson, L., Jul 2017, In : Applied Microbiology and Biotechnology. 101, 13, p. 5301-5311

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access