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Research Output

2020

Bacterial consortium and microbial metabolites increase grain quality and soybean yield

Moretti, L. G., Cruciol, C. A. C., Bossolani, J. W., Momesso, L., Garcia, A., Kuramae, E. & Hungria, M., 2020, In : Journal of Soil Science and Plant Nutrition. in press

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Bacterial Tomato Pathogen Ralstonia solanacearum Invasion Modulates Rhizosphere Compounds and Facilitates the Cascade Effect of Fungal Pathogen Fusarium solani

Su, L., Zhang, L., Qiu, P., Nie, D., Kuramae, E., Shen, B. & Shen, Q., 2020, In : Microorganisms. in press

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Can Palisade and Guinea Grass Sowing Time in Intercropping Systems Affect Soybean Yield and Soil Chemical Properties?

Costa, N., Andreotti, M., Costa Crusciol, C. A., Magelhaes Pariz, C., Bossolani, J. W., de Castilhos, A. M., Costa do Nascimento, C. A., da Rocha Lima, C. G., dos Santos Batista Bonini, C. & Kuramae, E., 2020, In : Frontiers In Sustainable Food Systems. 4, 81.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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17 Downloads (Pure)

Cultivation-independent and cultivation-dependent metagenomes reveal genetic and enzymatic potential of microbial community involved in the degradation of a complex microbial polymer

Costa, O. Y. A., De Hollander, M., Pijl, A., Liu, B. & Kuramae, E., 2020, In : Microbiome. in press, 76.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
37 Downloads (Pure)

Dynamics and resilience of soil mycobiome under multiple organic and inorganic pulse disturbances

Lourenço, K. S., Suleiman, A. K. A., Pijl, A., Cantarella, H. & Kuramae, E., 2020, In : Science of the Total Environment. 733, 1 september, 139173.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
64 Downloads (Pure)

Dynamics of active potential bacterial and fungal interactions in the assimilation of acidobacterial EPS in soil

Costa, O. Y. A., Pijl, A. & Kuramae, E., 2020, In : Soil Biology & Biochemistry. 148

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
16 Downloads (Pure)

Effects of growth-promoting bacteria on soybean root activity, plant development and yield

Moretti, L. G., Crusciol, C. A. C., Kuramae, E., Bossolani, J. W., Moreira, A., Costa, N. R., Alves, C. J., Pascoaloto, I. M., Rondina, A. B. L. & Hungria, M., 2020, In : Agronomy Journal. 112, 1, p. 418-428

Research output: Contribution to journal/periodicalArticleScientificpeer-review

1 Downloads (Pure)

From toilet to agriculture: Fertilization with microalgal biomass from wastewater impacts the soil and rhizosphere active microbiomes, greenhouse gas emissions and plant growth

Suleiman, A. K. A., Lourenço, K. S., Clark, C., Luz, R. L., Silva, G. H. R., Vet, L. E. M., Cantarella, H., Fernandes, T. V. & Kuramae, E., 2020, In : Resources, Conservation and Recycling. 161

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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8 Downloads (Pure)

Impact of different trace elements on the growth and proteome of two strains of Granulicella, class “Acidobacteriia”

Costa, O. Y. A., Oguejiofor, C., Zuehlke, D., Barreto, C. C., Wünsche, C., Riedel, K. & Kuramae, E., 2020, In : Frontiers in Microbiology. 11

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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13 Downloads (Pure)

Long-term lime and gypsum amendment increase nitrogen fixation and decrease nitrification and denitrification gene abundances in the rhizosphere and soil in a tropical no-till intercropping system

Bossolani, J. W., Crusciol, C. A. C., Merloti, L. F., Moretti, L. G., Costa, N., Tsai, S. M. & Kuramae, E., 2020, In : Geoderma. 375

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
13 Downloads (Pure)

Microbial functional diversity in vineyard soils: sulfur metabolism and links with grapevine plants and wine quality

Mocali, S., Kuramae, E., Kowalchuk, G., Fornasier, F. & Priori, S., 2020, In : Frontiers in Environmental Science. 8

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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4 Downloads (Pure)

Microbial N‑cycling genes abundance are affected by cover crop specie and development stage in an integrated cropping system

Rocha, K. F., Kuramae, E., Borges, B. M. F., Leite, M. F. A. & Rosolem, C. A., 2020, In : Archives of Microbiology.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Responses of Acidobacteria Granulicella sp. WH15 to high carbon revealed by integrated omics analyses

Costa, O. Y. A., Zerillo, M., Zühlke, D., Kielak, A. M., Pijl, A., Riedel, K. & Kuramae, E., 2020, In : Microorganisms. 8, 2, 244.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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41 Downloads (Pure)

Sorghum Growth Promotion by Paraburkholderia tropica and Herbaspirillum frisingense: Putative Mechanisms Revealed by Genomics and Metagenomics

Kuramae, E., Derksen, S., Schlemper, T., Dimitrov, M., Costa, O. Y. A. & da Silveira, A. P. D., 2020, In : Microorganisms. 8, 5, E725.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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28 Downloads (Pure)

The modulation of sugarcane growth and nutritional profile under aluminum

Godoy Labanca, E. R., Andrade, S. A. L., Kuramae, E. & da Silveira, A. P. D., 2020, In : Applied Soil Ecology. 156, 103715.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Video Byte: Forest floor microbes produce tough biofilm breaker: Exploring Solutions from Nature

Costa, O. Y. A., De Hollander, M., Pijl, A., Liu, B. & Kuramae, E., 2020

Research output: Non-textual formDigital or Visual ProductsProfessional

Open Access
File
2019

Acidobacteria

Kuramae, E. E. & de Assis Costa, O. Y., 2019, Encyclopedia of Microbiology (Fourth Edition). Schmidt, T. M. (ed.). Oxford: Academic Press, p. 1-8 8 p.

Research output: Chapter in book/volumeChapterScientificpeer-review

Assessing nickel tolerance of bacteria isolated from serpentine soils

Silva Costa, F., Figueiredo Sena Macedo, M. W., Araujo, A., Rodrigues, C., Kuramae, E. E., Alcanfor, S., Pessoa-Filho, M. & Barreto, C. C., 2019, In : Brazilian Journal of Microbiology. 50, 3, p. 705-713

Research output: Contribution to journal/periodicalArticleScientificpeer-review

1 Downloads (Pure)

Bacterial community composition and diversity of two different forms of an organic residue of bioenergy crop

Cipriano, M., Suleiman, A. K. A., da Silveira, A. P. D., Carmo, J. B. & Kuramae, E. E., 2019, In : PeerJ. 7, e6768.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
92 Downloads (Pure)

Conventional & organic soil management as divergent drivers of resident and active fractions of major soil food web constituents

Harkes, P., Suleiman, A. K. A., van den Elsen, S., De Haan, J., Holterman, M., Kuramae, E. & Helder, J., 2019, In : Scientific Reports. 9, 13521 (2019).

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
40 Downloads (Pure)

Environmental filtering: A case of bacterial community assembly in soil

Yan, Y., Klinkhamer, P. G. L., van Veen, J. A. & Kuramae, E. E., 2019, In : Soil Biology & Biochemistry. 136, 107531.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

1 Downloads (Pure)

Exploitation of new endophytic bacteria and their ability to promote sugarcane growth and nitrogen nutrition

da Silveira, A. P. D., Iório, R. D. P. F. I., Marcos, F. C. C., Fernandes, A. O., De Souza, S. A. C. D., Kuramae, E. E. & Cipriano, M., 2019, In : Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology. 112, 2, p. 283-295

Research output: Contribution to journal/periodicalArticleScientificpeer-review

1 Downloads (Pure)

Fungal-bacterial diversity and microbiome complexity predict ecosystem functioning

Wagg, C., Schlaeppi, K., Banerjee, S., Kuramae, E. & Van der Heijden, M. G. A., 2019, In : Nature Communications. 10, 4841.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
103 Downloads (Pure)

Legacy of land use history determines reprogramming of plant physiology by soil microbiome

Li, X. G., Jousset, A., De Boer, W., Carriön, V. J., Zhang, T., Wang, X. & Kuramae, E. E., 2019, In : ISME Journal. 13, p. 738-751

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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423 Downloads (Pure)

Long-term farming systems modulate multi-trophic responses

Lupatini, M., Korthals, G. W., Roesch, L. F. W. & Kuramae, E. E., 2019, In : Science of the Total Environment. 646, p. 480-490

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
177 Downloads (Pure)

Moisture is more important than Temperature for Assembly of Both Potentially Active and Whole Prokaryotic Communities in Subtropical Grassland

Lupatini, M., Suleiman, A. K. A., Jacques, R. J. S., Pylro, V. S., van Veen, J. A., Kuramae, E. E. & Roesch, L. F. W., 2019, In : Microbial Ecology. 77, 2, p. 460-470

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Nitrification inhibitors effectively target N2O-producing Nitrosospira spp. in tropical soil

Cassman, N., Soares, J. R., Pijl, A. S., Lourenço, K. S., van Veen, J. A., Cantarella, H. & Kuramae, E. E., 2019, In : Environmental Microbiology. 21, 4, p. 1241-1254

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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214 Downloads (Pure)

Organic amendment strengthens interkingdom associations in the soil and rhizosphere of barley (Hordeum vulgare)

Suleiman, A. K. A., Harkes, P., van den Elsen, S., Holterman, M., Korthals, G. W., Helder, J. & Kuramae, E. E., 2019, In : Science of the Total Environment. 133885.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

2 Downloads (Pure)

Peat substrate amended with chitin modulates the N-cycle, siderophore and chitinase responses in the lettuce rhizobiome

de Tender, C., Mesuere, B., van der Jeugt, F., Haegeman, A., Ruttink, T., Vandecasteele, B., Dawyndt, P., Debode, J. & Kuramae, E. E., 09 Jul 2019, In : Scientific Reports. 9

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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56 Downloads (Pure)

Root-associated microbiomes of wheat under the combined effect of plant development and nitrogen fertilization

Chen, S., Waghmode, T. R., Sun, R., Kuramae, E., Hu, C. & Liu, B., 2019, In : Microbiome. 7, 136(2019).

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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58 Downloads (Pure)

Strategies to mitigate the nitrous oxide emissions from nitrogen fertilizer applied with organic fertilizers in sugarcane

Lourenço, K. S., Rossetto, R., Vitti, A. C., Montezano, Z. F., Soares, J. R., Sousa, R. M., Carmo, J. B., Kuramae, E. E. & Cantarella, H., 2019, In : Science of the Total Environment. 650, Part I, p. 1476-1486

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Wood Decay Characteristics and Interspecific Interactions Control Bacterial Community Succession in Populus grandidentata (Bigtooth Aspen)

Kuramae, E. E., Leite, M. F. A., Suleiman, A. K. A., Gough, C. M., Castillo, B., Faller, L., Franklin, R. & Syring, J., 2019, In : Frontiers in Microbiology. 10, 2019.00979.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
80 Downloads (Pure)
2018

Comparative Genomics of Smut Pathogens: Insights From Orphans and Positively Selected Genes Into Host Specialization

Benevenuto, J., Texeira-Silva, N. S., Kuramae, E. E., Croll, D. & Vitorello, C. B. M., 2018, In : Frontiers in Microbiology. 9, 660.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
127 Downloads (Pure)

Co-variation of bacterial and fungal communities in different sorghum cultivars and growth stages is soil dependent

Schlemper, T. R., van Veen, J. A. & Kuramae, E. E., 2018, In : Microbial Ecology. 76, 1, p. 205-214

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
157 Downloads (Pure)

Dominance of bacterial ammonium oxidizers and fungal denitrifiers in the complex nitrogen cycle pathways related to nitrous oxide emission

Lourenço, K. S., Dimitrov, M., Pijl, A. S., Soares, J. R., do Carmo, J. B., van Veen, J. A., Cantarella, H. & Kuramae, E. E., 2018, In : GCB Bioenergy. 10, 9, p. 645-660

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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247 Downloads (Pure)

Effect of Burkholderia tropica and Herbaspirillum frisingense strains on sorghum growth is plant genotype dependent

Schlemper, T. R., Dimitrov, M., Silva Gutierrez, F., van Veen, J. A., Silveira, A. P. D. & Kuramae, E. E., 2018, In : PeerJ. 6, e5346.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
120 Downloads (Pure)

Genome-resolved metagenomics of sugarcane vinasse bacteria

Cassman, N., Lourenço, K. S., Braga do Carmo, J., Cantarella, H. & Kuramae, E. E., 2018, In : Biotechnology for Biofuels. 11, 48.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
199 Downloads (Pure)

Microbial extracellular polymeric substances – ecological functions and impact on soil aggregation

Costa, O. Y. A., Raaijmakers, J. M. & Kuramae, E. E., 2018, In : Frontiers in Microbiology. 9, 1636.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
158 Downloads (Pure)

Native bacteria promote plant growth under drought stress condition without impacting the rhizomicrobiome

Armada, E., Leite, M. F. A., Medina Penafiel, M. A., Azcón, R. & Kuramae, E. E., 2018, In : FEMS Microbiology Ecology. 94, 7, fiy092.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
103 Downloads (Pure)

Nitrosospira sp. govern nitrous oxide emissions in a tropical soil amended with residues of bioenergy crop

Lourenço, K. S., Cassman, N., Pijl, A. S., van Veen, J. A., Cantarella, H. & Kuramae, E. E., 2018, In : Frontiers in Microbiology. 9, 674.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
128 Downloads (Pure)

Recycling organic residues in agriculture impacts soil-borne microbial community structure, function and N2O emissions.

Suleiman, A. K. A., Lourenço, K. S., Pitombo, L., Mendes, L. W., Roesch, L. F. W., Pijl, A. S., do Carmo, J. B., Cantarella, H. & Kuramae, E. E., 2018, In : Science of the Total Environment. 631-632, p. 1089-1099

Research output: Contribution to journal/periodicalArticleScientificpeer-review

6 Downloads (Pure)

Resilience of the resident soil microbiome to organic and inorganic amendment disturbances and to temporary bacterial invasion

Lourenço, K. S., Suleiman, A. K. A., Pijl, A. S., van Veen, J. A., Cantarella, H. & Kuramae, E. E., 2018, In : Microbiome. 6, 142.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
98 Downloads (Pure)
2017

Amazonian Dark Earth and its Black Carbon Particles Harbor Different Fungal Abundance and Diversity

Reis Lucheta, A., Souza Cannavan, F. S., Tsai, S. M. & Kuramae, E. E., 2017, In : Pedosphere. 27, October, p. 832-845

Research output: Contribution to journal/periodicalArticleScientificpeer-review

2 Downloads (Pure)

Characterization of novel Acidobacteria exopolysaccharides with potential industrial and ecological applications

Kielak, A. M., Castellane, T. C. L., Campanharo, J. C., Colnago, L. A., Costa, O. Y. A., Corradi da Silva, M. L., van Veen, J. A., Lemos, E. G. & Kuramae, E. E., 2017, In : Scientific Reports. 7, 41193.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
175 Downloads (Pure)

Functional traits dominate the diversity-related selection of bacterial communities in the rhizosphere

Yan, Y., Kuramae, E. E., De Hollander, M., Klinkhamer, P. G. L. & van Veen, J. A., 2017, In : ISME Journal. 11, p. 56-66

Research output: Contribution to journal/periodicalArticleScientificpeer-review

31 Downloads (Pure)

Methanogens predominate in natural corrosion protective layers on metal sheet piles.

Kip, N., Jansen, S., Leite, M. F. A., De Hollander, M., Afanasyev, M., Kuramae, E. E. & van Veen, J. A., 2017, In : Scientific Reports. 7, 11899.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
173 Downloads (Pure)

Organic nitrogen rearranges both structure and activity of the soil-borne microbial seedbank

Leite, M. F. A., Pan, Y., Bloem, J., ten Berge, H. & Kuramae, E. E., 2017, In : Scientific Reports. 7, 42634.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
143 Downloads (Pure)

Rhizobacterial community structure differences among sorghum cultivars in different growth stages and soils

Schlemper, T. R., Leite, M. F. A., Reis Lucheta, A., Shimels, M., Bouwmeester, H. J., van Veen, J. A. & Kuramae, E. E., 2017, In : FEMS Microbiology Ecology. 93, 8, fix096.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

3 Downloads (Pure)

Soil microbiome is more heterogeneous in organic than in conventional farming system

Lupatini, M., Korthals, G. W., De Hollander, M., Janssens, T. K. S. & Kuramae, E. E., 04 Jan 2017, In : Frontiers in Microbiology. 7, 2064.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
220 Downloads (Pure)

Successive DNA extractions improve characterization of soil microbial communities

Dimitrov, M. R., Veraart, A. J., De Hollander, M., Smidt, H., van Veen, J. A. & Kuramae, E. E., 2017, In : PeerJ. 5, e2915.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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427 Downloads (Pure)