Ferry Hagen

Research output

Research output per year 2002 2018 2019 2021 2022 2024

• 188 Article
• 13 Book/Film/Article review
• 4 Chapter
• 4 Abstract
• 6 More
  • 3 Poster
  • 1 Contribution to conference proceedings
  • 1 PhD thesis
  • 1 Working paper/Discussion paper

Research output per year

Research output per year

Search results

• 2024

  Aspergillus hubkae, a Novel Species Isolated from a Patient with Probable Invasive Pulmonary Aspergillosis

  Zhou, Y. B., Rezaei-Matehkolaei, A., Meijer, M., Kraak, B., Gerrits van den Ende, B., Hagen, F., Afzalzadeh, S., Kiasat, N., Takesh, A., Hoseinnejad, A. & Houbraken, J., 11 May 2024, In: Mycopathologia. 189, 3, p. 44

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Invasive Pulmonary Aspergillosis 100%
  • aspergillosis 97%
  • Aspergillus 78%
  • Voriconazole 58%
  • lungs 54%

• Beyond bacteria: the growing threat of antifungal resistance

  van Rhijn, N., Arikan-Akdagli, S., Beardsley, J., Bongomin, F., Chakrabarti, A., Chen, S. C-A., Chiller, T., Lopes Colombo, A., Govender, N. P., Alastruey-Izquierdo, A., Kidd, S. E., Lackner, M., Li, R. & Hagen, F., 14 Sept 2024, In: The Lancet. 404, 10457, p. 1017-1018 2 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Clinical response to prednisone in a severe case of infant-juvenile paracoccidioidomycosis

  Guevara, A., Siqueira, N. P., de Sousa, R. P., Dos Santos, T. B., Assis, S. B., de Camargo, Z. P., Rodrigues, A. M., Hagen, F. & Hahn, R. C., 18 Jun 2024, (E-pub ahead of print) In: Revista Iberoamericana de Micologia.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Complete Genome Sequence of the Itraconazole Decreased Susceptible Madurella fahalii Type-Strain CBS 129176

  Konings, M., Gerrits van den Ende, B., Raats, M. W. J., Fahal, A. H., van de Sande, W. W. J. & Hagen, F., 17 Jan 2024, In: Mycopathologia. 189, 1, p. 6

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Madurella 100%
  • Mycetoma 82%
  • itraconazole 76%
  • azoles 75%
  • mycoses 72%
  1 Citation (Scopus)

• Fungal pathogens exposed – genomic and phenotypic insights into <em>Candida auris</em> and its relatives of the <em>Candida haemulonii</em> species complex

  de Jong, A. W., Boden, S., Zandijk, A., Kortsinoglou, A. M., Gerrits van den Ende, B., Francisco, E. C., Nefeli, P. K., Kouvelis, V. N., Zhou, M. & Hagen, F., 01 Jan 2024, In: bioRxiv. p. 2024.05.16.594571

  Research output: Contribution to journal/periodical › Article › Scientific

  Open Access

  • Candida 100%
  • virulence 74%
  • genomics 58%
  • pathogens 54%
  • genome assembly 38%

• Fusarioid keratitis and other superficial infections: A 10-years prospective study from Northeastern Brazil

  Ferreira da Cunha Neto, J., da Silva Rocha, W. P., Makris, G., Sandoval-Denis, M., Hagen, F., Crous, P. W. & Chaves, G. M., Jun 2024, In: PLoS Neglected Tropical Diseases. 18, 6, p. e0012247

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Improving disseminated histoplasmosis diagnosis in HIV/AIDS patients in Suriname: The role of a urine lateral flow assay

  Woittiez, L., Vestjens, S., Mawie, T., IJzerman, E., Haas, P-J., Hagen, F., Roosblad, J., Leopold, S., van Schagen, M. D., van Vugt, M. & Vreden, S., Jun 2024, In: PLoS Neglected Tropical Diseases. 18, 6, p. e0012272

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Inconsistencies within the proposed framework for stabilizing fungal nomenclature risk further confusion

  Kidd, S. E., Hagen, F., Halliday, C. L., Abdolrasouli, A., Boekhout, T., Crous, P. W., Ellis, D. H., Elvy, J., Forrest, G. N., Groenewald, M., Hahn, R. C., Houbraken, J., Rodrigues, A. M., Scott, J., Sorrell, T. C., Summerbell, R. C., Tsui, C. K. M., Yurkov, A. & Chen, S. C-A., 05 Mar 2024, (E-pub ahead of print) In: Journal of Clinical Microbiology. p. e0157023

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Pulmonary cryptococcoma in a Friesian horse in the Netherlands

  van Eijk, N. M. H. A., Houben, R. M. A. C., Tellegen, A. R., Hagen, F. & Ankringa, N., 2024, In: Veterinary Record Case Reports. 12, 2, p. e829

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Friesian (horse breed) 100%
  • Netherlands 51%
  • Horses 50%
  • horses 44%
  • Cryptococcus gattii 43%

• Susceptibility Testing of Environmental and Clinical Aspergillus sydowii Demonstrates Potent Activity of Various Antifungals

  Spruijtenburg, B., Rezusta, A., Houbraken, J., Hagen, F., de Groot, T., Meis, J. F. & Meijer, E. F. J., 03 Jul 2024, In: Mycopathologia. 189, 4, p. 61

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Unveiling Trichosporon austroamericanum sp. nov. A Novel Emerging Opportunistic Basidiomycetous Yeast Species

  Francisco, E. C., Desnos-Ollivier, M., Dieleman, C., Boekhout, T., Santos, D. W. D. C. L., Medina-Pestana, J. O., Colombo, A. L. & Hagen, F., 06 May 2024, In: Mycopathologia. 189, 3, p. 43

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Trichosporon 100%
  • Yeasts 53%
  • yeasts 43%
  • new species 41%
  • intergenic DNA 33%
• 2023

  A multicentre external quality assessment: A first step to standardise PCR protocols for the diagnosis of histoplasmosis and coccidioidomycosis

  Wilmes, D., Hagen, F., Verissimo, C., Alanio, A., Rickerts, V. & Buitrago, M. J., 11 May 2023, (E-pub ahead of print) In: Mycoses.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Coccidioidomycosis 100%
  • Histoplasmosis 91%
  • Histoplasma 72%
  • Coccidioides 51%
  • Polymerase Chain Reaction 40%
  3 Citations (Scopus)

• A surprising finding: The curious case of a tongue lesion misdiagnosed as paracoccidioidomycosis

  Gerrits van den Ende, B., Rodrigues, A. M., Hahn, R. C. & Hagen, F., 27 Mar 2023, In: Revista Iberoamericana de Micologia. 40, 1, p. 10-14 5 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Paracoccidioides 100%
  • Paracoccidioidomycosis 97%
  • Diagnostic Errors 64%
  • Tongue 61%
  • Nanopores 16%

• Candida khanbhai sp. nov., a new clinically relevant yeast within the Candida haemulonii species complex

  de Jong, A. W., Al-Obaid, K., Mohd Tap, R., Gerrits van den Ende, B., Groenewald, M., Joseph, L., Ahmad, S. & Hagen, F., 03 Feb 2023, In: Medical Mycology. 61, 2

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Candida 100%
  • Yeasts 78%
  • Invasive Fungal Infections 63%
  • Molecular Pathology 55%
  • Names 46%
  8 Citations (Scopus)

• Candida parapsilosis isolates carrying mutations outside FKS1 hotspot regions confer high echinocandin tolerance and facilitate the development of echinocandin resistance

  Daneshnia, F., Arastehfar, A., Lombardi, L., Binder, U., Scheler, J., Vahedi Shahandashti, R., Hagen, F., Lass-Flörl, C., Mansour, M. K., Butler, G. & Perlin, D. S., Jul 2023, In: International Journal of Antimicrobial Agents. 62, 1, p. 106831

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Echinocandins 100%
  • Candida parapsilosis 94%
  • Mutation 39%
  • Peptones 15%
  • Yeasts 8%
  6 Citations (Scopus)

• Comparing genomic variant identification protocols for Candida auris

  Li, X., Muñoz, J. F., Gade, L., Argimon, S., Bougnoux, M-E., Bowers, J. R., Chow, N. A., Cuesta, I., Farrer, R. A., Maufrais, C., Monroy-Nieto, J., Pradhan, D., Uehling, J., Vu, D., Yeats, C. A., Aanensen, D. M., d'Enfert, C., Engelthaler, D. M., Eyre, D. W., Fisher, M. C., & 6 othersHagen, F., Meyer, W., Singh, G., Alastruey-Izquierdo, A., Litvintseva, A. P. & Cuomo, C. A., 13 Apr 2023, In: Microbial genomics. 9, 4

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Candida 100%
  • Single Nucleotide Polymorphism 81%
  • Practice Guidelines 36%
  • Disease Outbreaks 34%
  • Genome 26%
  4 Citations (Scopus)

• Development of a Multiplex qPCR Assay for Fast Detection and Differentiation of Paracoccidioidomycosis Agents

  Pinheiro, B. G., Pôssa, A. P., Ricci, G., Nishikaku, A. S., Hagen, F., Hahn, R. C., Camargo, Z. P. D. & Rodrigues, A. M., 15 Mar 2023, In: Journal of Fungi.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access
  1 Citation (Scopus)

• High-Throughput Microsatellite Markers Development for Genetic Characterization of Emerging Sporothrix Species

  Losada, L. C. D. M. L., Monteiro, R. C., Carvalho, J. A. D., Hagen, F., Fisher, M. C., Spruijtenburg, B., Meis, J. F., Groot, T. D., Gonçalves, S. S., Negroni, R., Kano, R., Bonifaz, A., Camargo, Z. P. D. & Rodrigues, A. M., 14 Mar 2023, In: Journal of Fungi.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access
  10 Citations (Scopus)

• Identification of Clinical Trichosporon asteroides Strains by MALDI-TOF Mass Spectrometry: Evaluation of the Bruker Daltonics Commercial System and an In-House Developed Library

  Jun 2023, In: Mycopathologia. 188, 3, p. 243-249 7 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Trichosporon 100%
  • Matrix-Assisted Laser Desorption-Ionization Mass Spectrometry 79%
  • matrix-assisted laser desorption-ionization mass spectrometry 77%
  • Mass Spectrometry 59%
  • Libraries 58%
  3 Citations (Scopus)

• In vitro activity of isavuconazole against clinically relevant Trichosporon species: a comparative evaluation of EUCAST broth microdilution and MIC Test Strip methods

  02 Mar 2023, In: Journal of Antimicrobial Chemotherapy. 78, 3, p. 817-822 6 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • isavuconazole 100%
  • Trichosporon 88%
  • In Vitro Techniques 25%
  • posaconazole 23%
  • Voriconazole 21%
  1 Citation (Scopus)

• Misidentification of Talaromyces marneffei in wild animal and human nasal samples in Portugal - Red pigment production is not unique

  Le, T., Houbraken, J. & Hagen, F., 01 Oct 2023, In: Research in Veterinary Science. 164, p. 105035

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

• Reply to "Re: Fungal Nomenclature: Managing Change Is the Name of the Game"

  Kidd, S. E., Abdolrasouli, A. & Hagen, F., Aug 2023, In: Open Forum Infectious Diseases. 10, 8, p. ofad394

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Whole-genome sequencing confirms a persistent candidaemia clonal outbreak due to multidrug-resistant Candida parapsilosis

  Daneshnia, F., Hilmioğlu-Polat, S., Ilkit, M., Fuentes, D., Lombardi, L., Binder, U., Scheler, J., Hagen, F., Mansour, M. K., Butler, G., Lass-Flörl, C., Gabaldon, T. & Arastehfar, A., 01 Jun 2023, In: Journal of Antimicrobial Chemotherapy. 78, 6, p. 1488-1494 7 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Candidemia 100%
  • Candida parapsilosis 96%
  • Whole Genome Sequencing 84%
  • Echinocandins 72%
  • Disease Outbreaks 64%
  7 Citations (Scopus)
• 2022

  Acquired fluconazole resistance and genetic clustering in Diutina (Candida) catenulata from clinical samples

  Nourrisson, C., Moniot, M., Lavergne, R-A., Robert, E., Bonnin, V., Hagen, F., Grenouillet, F., Cafarchia, C., Butler, G., Cassaing, S., Sabou, M., Le Pape, P., Poirier, P. & Morio, F., 06 Oct 2022, (E-pub ahead of print) In: Clinical Microbiology and Infection.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Fluconazole 100%
  • Candida 88%
  • Genetic Variation 83%
  • Cluster Analysis 77%
  • Candida parapsilosis 57%
  6 Citations (Scopus)

• A Spotlight on Sporothrix and Sporotrichosis

  Rodrigues, A. M., Hagen, F. & de Camargo, Z. P., Aug 2022, In: Mycopathologia. 187, 4, p. 407-411 5 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • sporotrichosis 100%
  • Sporothrix 97%
  • Sporotrichosis 94%
  • Ophiostomatales 50%
  • Sporothrix schenckii 31%
  18 Citations (Scopus)

• Candidemia among Hospitalized Pediatric Patients Caused by Several Clonal Lineages of Candida parapsilosis

  Hare, R. K., Arastehfar, A., Rosendahl, S., Charsizadeh, A., Daneshnia, F., Eshaghi, H., Mirhendi, H., Boekhout, T., Hagen, F. & Arendrup, M. C., 12 Feb 2022, In: Journal of Fungi. 8, 2

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Candida parapsilosis 100%
  • Candidemia 98%
  • pediatrics 90%
  • polymorphism 75%
  • Disease Outbreaks 50%
  7 Citations (Scopus)

• Cutaneous disseminated sporotrichosis in immunocompetent patient: Case report and literature review

  Queiroz-Telles, F., Cognialli, R. C., Salvador, G. L., Moreira, G. A., Herkert, P. F. & Hagen, F., 11 May 2022, In: Medical Mycology Case Reports. 36, p. 31-34 4 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Sporotrichosis 100%
  • Brazil 40%
  • Skin 36%
  • Sporothrix 34%
  • Lymphatic Vessels 26%
  8 Citations (Scopus)

• De novo Nanopore Genome Sequencing of the Clinical Diutina catenulata Type-strain CBS565

  Boden, S., Morio, F., Zhou, M., Gerrits van den Ende, B. & Hagen, F., 10 May 2022, In: Mycopathologia.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Nanopore Sequencing 100%
  • nanopores 89%
  • fluconazole 40%
  • Genome 40%
  • genome assembly 36%
  2 Citations (Scopus)

• Genetic and phenotypic diversity of fecal Candida albicans strains in irritable bowel syndrome

  van Thiel, I. A. M., Stavrou, A. A., de Jong, A., Theelen, B., Davids, M., Hakvoort, T. B. M., Admiraal-van den Berg, I., Weert, I. C. M., de Kruijs, M. A. M. H., Vu, D., Moissl-Eichinger, C., Heinsbroek, S. E. M., Jonkers, D. M. A. E., Hagen, F., Boekhout, T., de Jonge, W. J. & van den Wijngaard, R. M., 30 Mar 2022, In: Scientific Reports. 12, 1, p. 5391

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Irritable Bowel Syndrome 100%
  • Candida albicans 88%
  • Genetic Variation 84%
  • Candida albicans ECE1 protein 31%
  • Fungi 26%
  6 Citations (Scopus)

• JMM Profile: Trichosporon yeasts: from superficial pathogen to threat for haematological-neutropenic patients

  Francisco, E. C. & Hagen, F., Dec 2022, In: Journal of Medical Microbiology. 71, 12

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Trichosporon 100%
  • Yeasts 53%
  • Infections 31%
  • Trichosporonosis 29%
  • Fungemia 23%
  3 Citations (Scopus)

• Molecular epidemiology and clinical-laboratory aspects of chromoblastomycosis in Mato Grosso, Brazil

  Guevara, A., Nery, A. F., de Souza Carvalho Melhem, M., Bonfietti, L., Rodrigues, A. M., Hagen, F., de Carvalho, J. A., de Camargo, Z. P., Jacomel F de Souza Lima, B., Vicente, V. A. & Hahn, R. C., Dec 2022, In: Mycoses.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Chromoblastomycosis 100%
  • Molecular Epidemiology 73%
  • Brazil 57%
  • Terbinafine 52%
  • Voriconazole 47%
  6 Citations (Scopus)

• Molecular Tools for Candida auris Identification and Typing

  de Jong, A. W., Gerrits van den Ende, B. & Hagen, F., 2022, In: Methods in molecular biology (Clifton, N.J.). 2517, p. 33-41 9 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Candida 100%
  • Whole Genome Sequencing 37%
  • Microsatellite Repeats 34%
  • Genotype 23%
  2 Citations (Scopus)

• Mucormycosis in Children With Hematologic Malignancies: A Case Series and Review of the Literature

  Loeffen, Y. G. T., Scharloo, F., Goemans, B. F., Heitink-Polle, K. M. J., Lindemans, C. A., van der Bruggen, T., Hagen, F. & Wolfs, T. F. W., 13 Jun 2022, (E-pub ahead of print) In: Pediatric Infectious Disease Journal.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Mucormycosis 100%
  • Hematologic Neoplasms 73%
  • Child 31%
  • Mycoses 18%
  • Mortality 18%
  4 Citations (Scopus)

• Proposed nomenclature for Pseudallescheria, Scedosporium and related genera (vol 67, pg 1, 2014)

  Lackner, M., de Hoog, G. S., Yang, L., Ferreira Moreno, L., Ahmed, S. A., Andreas, F., Kaltseis, J., Nagl, M., Lass-Floerl, C., Risslegger, B., Rambach, G., Speth, C., Robert, V., Buzina, W., Chen, S., Bouchara, J-P., Cano-Lira, J. F., Guarro, J., Gene, J., Fernandez Silva, F., & 47 othersHaido, R., Haase, G., Havlicek, V., Garcia-Hermoso, D., Meis, J. F., Hagen, F., Kirchmair, M., Rainer, J., Schwabenbauer, K., Zoderer, M., Meyer, W., Gilgado, F., Schwabenbauer, K., Vicente, V. A., Pieckova, E., Regenermel, M., Rath, P-M., Steinmann, J., de Alencar, X. W., Symoens, F., Tintelnot, K., Ulfig, K., Velegraki, A., Tortorano, A. M., Giraud, S., Mina, S., Rigler-Hohenwarter, K., Hernando, F. L., Ramirez-Garcia, A., Pellon, A., Kaur, J., Bergter, E. B., de Meirelles, J. V., da Silva, I. D., Delhaes, L., Alastruey-Izquierdo, A., Li, R., Lu, Q., Moussa, T., Almaghrabi, O., Al-Zahrani, H., Okada, G., Deng, S., Liao, W., Zeng, J., Issakainen, J. & Liporagi Lopes, L. C., Mar 2022, In: Fungal Diversity. 113, 1, p. 193-194

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

• Standardized methods to rear high-quality Galleria mellonella larvae for the study of fungal pathogens

  de Jong, A. W., van Veldhuizen, D., Groot, A. T. & Hagen, F., Dec 2022, In: Entomologia Experimentalis et Applicata. 170, 12, p. 1073-1080

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access
  3 Citations (Scopus)
• 2021

  A new duplex PCR assay for the rapid screening of mating-type idiomorphs of pathogenic Sporothrix species

  de Carvalho, J. A., Pinheiro, B. G., Hagen, F., Gonçalves, S. S., Negroni, R., Kano, R., Bonifaz, A., de Camargo, Z. P. & Rodrigues, A. M., Oct 2021, In: Fungal Biology.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Sporothrix 100%
  • duplex 75%
  • mating types 72%
  • sporotrichosis 61%
  • Sporotrichosis 58%
  18 Citations (Scopus)

• Chromoblastomycosis in Latin America and the Caribbean: epidemiology over the past 50 years

  Guevara, A., Siqueira, N. P., Nery, A. F., Cavalcante, L. R. D. S., Hagen, F. & Hahn, R. C., 12 Oct 2021, In: Medical Mycology.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Chromoblastomycosis 100%
  • Latin America 74%
  • Epidemiology 49%
  • Fungi 28%
  • Chronic Disease 23%
  15 Citations (Scopus)

• Cryptococcosis and Cryptococcus

  Francisco, E. C., de Jong, A. W. & Hagen, F., 05 Jul 2021, In: Mycopathologia.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access
  23 Citations (Scopus)

• Cryptococcus bacillisporus causing cryptococcoma of the beak of an African grey parrot (Psittacus erithacus), Portugal

  Silva, C., Juan-Sallés, C., Mendes, J., Mendes, A., Ruivo, M., Abad, J. L., Hagen, F. & Colom, M. F., Dec 2021, In: Medical Mycology Case Reports. 34, p. 8-12 5 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Parrots 100%
  • Beak 97%
  • Cryptococcus 86%
  • Portugal 77%
  • Birds 33%
  3 Citations (Scopus)

• Development and Analysis of qPCR for the Identification of Arthroconidial Yeasts of the Genus Magnusiomyces

  Kaplan, E., Aktaş, D., Döğen, A., Hilmioğlu-Polat, S., Gümral, R., Hagen, F., Ilkit, M. & de Hoog, G. S., Mar 2021, In: Mycopathologia. 186, 1, p. 41-51 11 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Yeasts 100%
  • quantitative polymerase chain reaction 97%
  • Limit of Detection 87%
  • yeasts 81%
  • Sputum 81%
  1 Citation (Scopus)

• Development and evaluation of a multiplex qPCR assay for rapid diagnostics of emerging sporotrichosis

  Della Terra, P. P., Gonsales, F. F., de Carvalho, J. A., Hagen, F., Kano, R., Bonifaz, A., Camargo, Z. P. D. & Rodrigues, A. M., 23 Oct 2021, In: Transboundary and emerging diseases.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • sporotrichosis 100%
  • Sporothrix 97%
  • Sporotrichosis 94%
  • Sporothrix schenckii 47%
  • Area Under Curve 38%
  13 Citations (Scopus)

• Domestic Birds as Source of Cryptococcus deuterogattii (AFLP6/VGII): Potential Risk for Cryptococcosis

  Siqueira, N. P., Favalessa, O. C., Maruyama, F. H., Dutra, V., Nakazato, L., Hagen, F. & Hahn, R. C., 11 Nov 2021, In: Mycopathologia.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • cryptococcosis 100%
  • Cryptococcus (Tremellomycetes) 91%
  • Cryptococcus 89%
  • Cryptococcosis 84%
  • excreta 73%
  7 Citations (Scopus)

• Emergence of Candida auris in Brazil in a COVID-19 Intensive Care Unit

  de Almeida, J. N., Francisco, E. C., Hagen, F., Brandão, I. B., Pereira, F. M., Presta Dias, P. H., de Miranda Costa, M. M., de Souza Jordão, R. T., de Groot, T. & Colombo, A. L., 17 Mar 2021, In: Journal of Fungi. 7, 3

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Candida 100%
  • travel 97%
  • Brazil 83%
  • anidulafungin 79%
  • Intensive Care Units 76%
  71 Citations (Scopus)

• Exploring genetic diversity, population structure, and phylogeography in Paracoccidioides species using AFLP markers

  Roberto, T. N., de Carvalho, J. A., Beale, M. A., Hagen, F., Fisher, M. C., Hahn, R. C., de Camargo, Z. P. & Rodrigues, A. M., 01 Dec 2021, In: Studies in Mycology. 100

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Phylogeography 100%
  • Paracoccidioides 98%
  • phylogeography 66%
  • amplified fragment length polymorphism 58%
  • Genetic Variation 56%
  17 Citations (Scopus)

• Fusarium: more than a node or a foot-shaped basal cell

  Crous, P. W., Lombard, L., Sandoval-Denis, M., Seifert, K. A., Schroers, H-J., Chaverri, P., Gené, J., Guarro, J., Hirooka, Y., Bensch, K., Kema, G. H. J., Lamprecht, S. C., Cai, L., Rossman, A. Y., Stadler, M., Summerbell, R. C., Taylor, J. W., Ploch, S., Visagie, C. M., Yilmaz, N., & 107 othersFrisvad, J. C., Abdel-Azeem, A. M., Abdollahzadeh, J., Abdolrasouli, A., Akulov, A., Alberts, J. F., Araújo, J. P. M., Ariyawansa, H. A., Bakhshi, M., Bendiksby, M., Amor, A. B. H., Bezerra, J. D. P., Boekhout, T., Câmara, M. P. S., Carbia, M., Cardinali, G., Castañeda-Ruiz, R. F., Celis, A., Chaturvedi, V., Collemare, J., Croll, D., Damm, U., Decock, C. A., Vries, R. P. D., Ezekiel, C. N., Fan, X. L., Fernández, N. B., Gaya, E., González, C. D., Gramaje, D., Groenewald, J. Z., Grube, M., Guevara-Suarez, M., Gupta, V. K., Guarnaccia, V., Haddaji, A., Hagen, F., Haelewaters, D., Hansen, K., Hashimoto, A., Hernández-Restrepo, M., Houbraken, J., Hubka, V., Hyde, K. D., Iturriaga, T., Jeewon, R., Johnston, P. R., Jurjević, Ž., Karalti, İ., Korsten, L., Kuramae, E. E., Kušan, I., Labuda, R., Lawrence, D. P., Lee, H. B., Lechat, C., Li, H. Y., Litovka, Y. A., Maharachchikumbura, S. S. N., Marin-Felix, Y., Kemkuignou, B. M., Matočec, N., McTaggart, A. R., Mlčoch, P., Mugnai, L., Nakashima, C., Nilsson, R. H., Noumeur, S. R., Pavlov, I. N., Peralta, M. P., Phillips, A. J. L., Pitt, J. I., Polizzi, G., Quaedvlieg, W., Rajeshkumar, K. C., Restrepo, S., Rhaiem, A., Robert, J., Robert, V., Rodrigues, A. M., Salgado-Salazar, C., Samson, R. A., Santos, A. C. S., Shivas, R. G., Souza-Motta, C. M., Sun, G. Y., Swart, W. J., Szoke, S., Tan, Y. P., Taylor, J. E., Taylor, P. W. J., Tiago, P. V., Váczy, K. Z., Wiele, N. V. D., Merwe, N. A. V. D., Verkley, G. J. M., Vieira, W. A. S., Vizzini, A., Weir, B. S., Wijayawardene, N. N., Xia, J. W., Yáñez-Morales, M. J., Yurkov, A., Zamora, J. C., Zare, R., Zhang, C. L. & Thines, M., Apr 2021, In: Studies in Mycology. 98, 184 p., 100116.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Fusarium 100%
  • Foot 64%
  • Nectriaceae 51%
  • Gibberella 33%
  • cells 24%
  179 Citations (Scopus)

• Molecular typing and antifungal susceptibility study of Aspergillus spp. in intensive care unit (ICU) patients in Indonesia

  Rozaliyani, A., Sedono, R., Sjam, R., Tugiran, M., Adawiyah, R., Setianingrum, F., Jusuf, A., Sungkar, S., Hagen, F., Meis, J. F. & Wahyuningsih, R., 31 Jul 2021, In: Journal of infection in developing countries. 15, 7, p. 1014-1020 7 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Molecular Typing 100%
  • Indonesia 90%
  • Aspergillus 87%
  • Intensive Care Units 63%
  • Invasive Pulmonary Aspergillosis 63%
  4 Citations (Scopus)

• Multi-locus sequence typing reveals genotypic similarity in Nigerian Cryptococcus neoformans AFLP1/VNI of environmental and clinical origin

  Hagen, F., Chidebelu, P., Nweze, E., Meis, J. & Cogliati, M., 19 Oct 2021, In: Journal of Medical Microbiology. 70, 10, p. 1 9 p., 001440.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Cryptococcus neoformans 100%
  • Nigeria 55%
  • Cryptococcosis 22%
  • Acquired Immunodeficiency Syndrome 21%
  • Columbidae 21%
  2 Citations (Scopus)

• Mycopathologia 2020: Legacy and Change to Remain Relevant for Content, Creation, and Communication

  Bouchara, J-P., Chotirmall, S. H., Hagen, F. & Chaturvedi, V., May 2021, In: Mycopathologia. 186, 2, p. 155-162 8 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Peer Review 100%
  • peers 94%
  • communication (human) 88%
  • Communication 60%
  • Pandemics 57%

• Nanopore Genome Sequencing and Variant Analysis of the Susceptible Candida auris Strain L1537/2020, Salvador, Brazil

  de Jong, A. W., Francisco, E. C., de Almeida, J. N., Brandão, I. B., Pereira, F. M., Dias, P. H. P., de Miranda Costa, M. M., de Souza Jordão, R. T., Vu, D., Colombo, A. L. & Hagen, F., 20 Oct 2021, In: Mycopathologia.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Nanopore Sequencing 100%
  • nanopores 89%
  • Candida 64%
  • Brazil 53%
  • Genome 40%
  4 Citations (Scopus)

• Neglecting Genetic Diversity Hinders Timely Diagnosis of Cryptococcus Infections

  Shi, D., Haas, P-J., Boekhout, T., Hahn, R. C. & Hagen, F., 19 Mar 2021, In: Journal of Clinical Microbiology. 59, 4

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review
  9 Citations (Scopus)