Research output per year
Research output per year
Fingerprint
Dive into the research topics where Jos M. Raaijmakers is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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First report of Pectobacterium peruviense as the causal pathogen of blackleg and soft rot in Solanum tuberosum cv. Superchola in Cañar, Ecuador
Peña-Zuñiga, E., Barriga-Medina, N., Ramirez-Villacis, D., Miranda-Guerrero, M., Pieterse, C. M. J., Raaijmakers, J. M. & Leon-Reyes, A., 02 Jan 2025, In: Plant Disease.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
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Novel bacteriophages targeting wheat phyllosphere bacteria carry DNA modifications and single-strand breaks
Dougherty, P. E., Pedersen, M. S., Forero-Junco, L. M., Carstens, A. B., Raaijmakers, J. M., Riber, L. & Hansen, L. H., 01 Feb 2025, In: Virus Research. 199524.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access -
bacLIFE: a user-friendly computational workflow for genome analysis and prediction of lifestyle-associated genes in bacteria
Guerrero-Egido, G., Pintado, A., Bretscher, K. M., Arias-Giraldo, L-M., Paulson, J. N., Spaink, H. P., Claessen, D., Ramos, C., Cazorla, F. M., Medema, M. H., Raaijmakers, J. M. & Carrión, V. J., 07 Mar 2024, In: Nature Communications. 15, 2072.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open Access2 Citations (Scopus) -
C4 cereal and biofuel crop microbiomes
Zai, X., Cordovez, V., Zhu, F., Zhao, M., Diao, X., Zhang, F., Raaijmakers, J. M. & Song, C., 21 May 2024, (E-pub ahead of print) In: Trends in Microbiology.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
Open AccessFile20 Downloads (Pure) -
Darwin’s expedition revisited to reveal the evolution of plant–microbe interactions on Galápagos
Cordovez, V., Carrión, V. J., Rivas Torres, G., Ortiz, D. A., Cabrera, W., Balian, H., Vivanco, A. K., Pérez-Jaramillo, J. E., Chaves, J., Pazmiño, D. A., van ’t Hof, P. & Raaijmakers, J. M., 06 Aug 2024, In: Nature Microbiology. 9, 8, p. 1903-1905 3 p.Research output: Contribution to journal/periodical › Article › Scientific › peer-review
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MicroSOS: Plants crying for help in a changing world
Raaijmakers, J. M., Cordovez da Cunha, V., Zwart, M., Garbeva, P. & Arias Giraldo, L.
01/01/2024 → 31/12/2027
Project: Research
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PRoMISE II: Gates Foundation: Promoting Root Microbes for Integrated Striga Eradication II
Raaijmakers, J. M., de Boer, W., Kuramae, E., Maciá Vicente, J. & Shimels, M.
01/08/2023 → 31/07/2028
Project: Research
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Unwiring beneficial functions and regulatory networks in the plant endosphere
Raaijmakers, J. M. & Pan, X.
01/02/2020 → 01/02/2026
Project: Research
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Microbiome Assisted Triticum Resilience In X-dimensions
Raaijmakers, J. M., Cordovez da Cunha, V. & Gouka, L.
01/01/2020 → 30/06/2027
Project: Research
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MiCRop: Harnessing the second genome of plants: Microbial imprinting for crop resilience
Raaijmakers, J. M., Garbeva, P., van Wezel, G., Kuramae, E., Zwart, M., de Bruijn, I., Dini-Andreote, F. & Rizaludin, M. S.
01/01/2020 → 31/12/2030
Project: Research
Prizes
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Elected member of the Royal Academy of Arts and Sciences
Raaijmakers, Jos M. (Recipient), 2023
Prize: Election to learned society
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Global Highly Cited Researchers 2018
Raaijmakers, Jos M. (Recipient), 2018
Prize: National/international honour › Academic
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Global Highly Cited Researchers 2019
Raaijmakers, Jos M. (Recipient), 19 Nov 2019
Prize: National/international honour › Academic
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Global Highly Cited Researchers 2020
Raaijmakers, Jos M. (Recipient), 2020
Prize: National/international honour › Academic
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Global Highly Cited Researchers 2021
Raaijmakers, Jos M. (Recipient), 2021
Prize: National/international honour › Academic
Activities
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Plant Microbiomes and Stress Tolerance
Jos M. Raaijmakers (Keynote speaker)
16 Nov 2024 → 21 Nov 2024Activity: Talk or presentation › Academic
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Communication in the Plant Microbiome
Jos M. Raaijmakers (Invited speaker)
15 Nov 2024Activity: Talk or presentation › Academic
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Rewilding Plant Microbiomes
Jos M. Raaijmakers (Invited speaker)
17 Oct 2024Activity: Talk or presentation › Academic
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Plant Microbiomes and Stress Tolerance
Jos M. Raaijmakers (Invited speaker)
04 Oct 2024Activity: Talk or presentation › Academic
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Plant Microbiomes and Biotic Stress Tolerance
Jos M. Raaijmakers (Invited speaker)
03 Sept 2024 → 04 Sept 2024Activity: Talk or presentation › Academic
Press/Media
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bacLIFE: How AI distinguishes the good from the bad and the ugly
02/04/2024
1 item of Media coverage
Press/Media: Research
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Jos Raaijmakers nieuw lid KHMW: ‘Brug slaan tussen wetenschap en maatschappij’
19/02/2024
1 Media contribution
Press/Media: Research
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Jos Raaijmakers new member KHMW: ‘Build a bridge between science and society’
19/02/2024
1 item of Media coverage
Press/Media: Research
Datasets
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Genome-wide analysis of bacterial determinants of plant growth promotion and induced systemic resistance by Pseudomonas fluorescens
Etalo, D. N. (Creator) & Raaijmakers, J. M. (Creator), NCBI, 26 Aug 2017
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA400211
Dataset
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Data from: Molecular detection and quantification of the Striga seedbank in agricultural soils
Benti, G. M. (Creator), Rybka, D. (Creator), Klein Gunnewiek, P. J. A. (Creator), Tessema, T. (Creator), Raaijmakers, J. M. (Creator) & Etalo, D. (Creator), Wiley-Blackwell, 29 Apr 2022
DOI: 10.1111/wre.12535
Dataset
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Exploring the native habitat and wild relatives of common bean (Phaseolus vulgaris) for ‘missing plant microbes’
Perez Jaramillo, J. E. (Creator), De Hollander, M. (Creator), Ramirez, C. A. (Creator), Mendes, R. (Creator), Raaijmakers, J. M. (Creator) & Carrion Bravo, V. (Creator), European Nucleotide Archive (ENA), 23 Oct 2018
https://www.ebi.ac.uk/ena/data/view/PRJEB26084
Dataset
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Bulk Soil Microbiome Raw sequence reads
Abera Dinke, S. (Creator), Shimels, M. (Creator), Tessema, T. (Creator), Raaijmakers, J. M. (Creator) & Andreote, F. D. (Creator), NCBI, 21 May 2022
https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA841233
Dataset
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Disentangling the genetic basis of rhizosphere microbiome assembly in tomato
Oyserman, B. (Creator), Sarango Flores, S. W. (Creator), Griffioen, T. (Creator), Pan, X. (Creator), van der Wijk, E. (Creator), Pronk, L. (Creator), Lokhorst, W. (Creator), Nurfikari, A. (Creator), Paulson, J. N. (Creator), Movassagh, M. (Creator), Stopnisek, N. (Creator), Kupczok, A. (Creator), Cordovez da Cunha, V. (Creator), Carrion Bravo, V. (Creator), Ligterink, W. (Creator), Snoek, B. (Creator), Medema, M. H. (Creator) & Raaijmakers, J. M. (Creator), European Nucleotide Archive (ENA), 02 Mar 2022
https://www.ebi.ac.uk/ena/browser/view/PRJNA787039
Dataset