20022020

Research output per year

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Research Output

2002

Effects of agronomical measures on the microbial deversity of soils as related to the suppression of soil-borne plant pathogens

Van Elsas, J. D., Garbeva, P. V. & Salles, J., 2002, In : Biodegradation. 13, 1, p. 29-40

Research output: Contribution to journal/periodicalArticleScientificpeer-review

2003

Predominant Bacillus spp. in agricultural soil under different management regimes detected via PCR-DGGE

Garbeva, P. V., Van Veen, J. A. & Van Elsas, J. D., 2003, In : Microbial Ecology. 45, 3, p. 302-316

Research output: Contribution to journal/periodicalArticleScientificpeer-review

5 Downloads (Pure)
2004

Assessment of the diversity, and antagonism towards Rhizoctonia solani AG3, of Pseudomonas species in soil from different agricultural regimes

Garbeva, P. V., Van Veen, J. A. & van Elsas, J. D., 2004, In : FEMS Microbiology Ecology. 47, 1, p. 51-64

Research output: Contribution to journal/periodicalArticleScientificpeer-review

2 Downloads (Pure)

Microbail diversity in soil: selection of microbial populations by plant and soil type and implications for disease suppressiveness

Garbeva, P. V., Van Veen, J. A. & van Elsas, J. D., 2004, In : Annual Review of Phytopathology. 42, p. 243-270

Research output: Contribution to journal/periodicalArticleScientificpeer-review

9 Downloads (Pure)

Quantitative detection and diversity of the pyrrolnitrin biosynthetic locus in soil under different treatments

Garbeva, P. V., Voesenek, K. & van Elsas, J. D., 2004, In : Soil Biology & Biochemistry. 36, 9, p. 1453-1463

Research output: Contribution to journal/periodicalArticleScientificpeer-review

4 Downloads (Pure)
2005
Open Access
File
13 Downloads (Pure)
2006

Effect of above-ground plant species on soil microbial community structure and its impact on suppression of Rhizoctonia solani AG3

Garbeva, P. V., Postma, J., Van Veen, J. A. & van Elsas, J. D., 2006, In : Environmental Microbiology. 8, 2, p. 233-246

Research output: Contribution to journal/periodicalArticleScientificpeer-review

3 Downloads (Pure)
2008

Rhizosphere microbial community and its response to plant species and soil history

Garbeva, P. V., van Elsas, J. D. & Van Veen, J. A., 2008, In : Plant and Soil. 302, 1-2, p. 19-32

Research output: Contribution to journal/periodicalArticleScientificpeer-review

4 Downloads (Pure)
2009

Inter-specific interactions between carbon-limited soil bacteria affect behavior and gene expression

Garbeva, P. V. & De Boer, W., 2009, In : Microbial Ecology. 58, 1, p. 36-46

Research output: Contribution to journal/periodicalArticleScientificpeer-review

6 Downloads (Pure)
2011

Fungistasis and general soil biostasis - A new synthesis.

Garbeva, P. V., Hol, W. H. G., Termorshuizen, A. J., Kowalchuk, G. A. & De Boer, W., 2011, In : Soil Biology & Biochemistry. 43, 3, p. 469-477

Research output: Contribution to journal/periodicalArticleScientificpeer-review

3 Downloads (Pure)

No apparent costs for facultative antibiotic production by the soil bacterium Pseudomonas fluorescens Pf0-1

Garbeva, P. V., Tyc, O., Remus-Emsermann, M. N. P., Van der Wal, A., Vos, M., Silby, M. W. & De Boer, W., 2011, In : PLoS One. 6, 11, e27266.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
375 Downloads (Pure)

Transcriptional and antagonistic responses of Pseudomonas fluorescens Pf0-1 to phylogenetically different bacterial competitors

Garbeva, P. V., Silby, M. W., Raaijmakers, J. M., Levy, S. & De Boer, W., 2011, In : ISME Journal. 5, 6, p. 973-985

Research output: Contribution to journal/periodicalArticleScientificpeer-review

4 Downloads (Pure)
2012

Draft Genome Sequence of the Antagonistic Rhizosphere Bacterium Serratia plymuthica Strain PRI-2C

Garbeva, P. V., Van Elsas, J. D. & De Boer, W., 2012, In : Journal of Bacteriology. 194, 15, p. 4119-4120

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
380 Downloads (Pure)
2013

The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms

Mendes, R., Garbeva, P. V. & Raaijmakers, J. M., 2013, In : FEMS Microbiology Reviews. 37, 5, p. 634-663

Research output: Contribution to journal/periodicalArticleScientificpeer-review

8 Downloads (Pure)
2014

Draft Genome Sequence of Pedobacter sp. Strain V48, Isolated from a Coastal Sand Dune in the Netherlands

Bitzer, A. S., Garbeva, P. V. & Silby, M. W., 2014, In : Genome Announcements. 2, 1, e00094-14.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
288 Downloads (Pure)

Impact of interspecific interactions on antimicrobial activity among soil bacteria

Tyc, O., Van den Berg, M., Gerards, S., Van Veen, J. A., Raaijmakers, J., De Boer, W. & Garbeva, P., 2014, In : Frontiers in Microbiology. 5, 567.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
524 Downloads (Pure)

Volatile-mediated interactions between phylogenetically different soil bacteria

Garbeva, P. V., Hordijk, C. A., Gerards, S. & De Boer, W., 2014, In : Frontiers in Microbiology. 5, p. 289

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
680 Downloads (Pure)

Volatiles produced by the mycophagous soil bacterium Collimonas

Garbeva, P. V., Hordijk, C. A., Gerards, S. & De Boer, W., 2014, In : FEMS Microbiology Ecology. 87, 3, p. 639-649

Research output: Contribution to journal/periodicalArticleScientificpeer-review

17 Downloads (Pure)
2015

A fragrant neighborhood: Volatile mediated bacterial interactions in soil

Schulz-Bohm, K., Zweers, H., De Boer, W. & Garbeva, P., 2015, In : Frontiers in Microbiology. 6, 01212.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
255 Downloads (Pure)

Exploring the genomic traits of fungus-feeding bacterial genus Collimonas

Song, C., Schmidt, R. L., de Jager, V. C. L., Krzyzanowska, D., Jongedijk, E., Cankar, K., Beekwilder, J., van Veen, A., De Boer, W., van Veen, J. A. & Garbeva, P. V., 2015, In : BMC Genomics. 16, 1103.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
224 Downloads (Pure)

Non-random species loss in bacterial communities reduces antifungal volatile production

Hol, G., Garbeva, P., Hordijk, C., Hundscheid, M. P. J., Klein Gunnewiek, P. J. A., Van Agtmaal, M., Kuramae, E. E. & De Boer, W., 2015, In : Ecology. 96, 8, p. 2042-2048

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
379 Downloads (Pure)

The effect of phylogenetically different bacteria on the fitness of Pseudomonas fluorescens in sand microcosms

Tyc, O., Wolf, A. & Garbeva, P., 2015, In : PLoS One. 10, 3, e0119838.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
172 Downloads (Pure)

Volatile affairs in microbial interactions

Schmidt, R., Cordovez, V., De Boer, W., Raaijmakers, J. & Garbeva, P., 2015, In : ISME Journal. 9, p. 2329-2335

Research output: Contribution to journal/periodicalArticleScientificpeer-review

15 Downloads (Pure)

Volatiles in inter-specific bacterial interactions

Tyc, O., Zweers, H., De Boer, W. & Garbeva, P. V., 2015, In : Frontiers in Microbiology. 6, 2015.01412.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
611 Downloads (Pure)
2016

Calling in the Dark: the Role of Volatiles for Communication in the Rhizosphere

van Dam, N. M., Weinhold, A. & Garbeva, P. V., 2016, Deciphering Chemical language of Plant Communication. Springer, p. 175-210 (Signaling and Communication in Plants).

Research output: Chapter in book/volumeChapterScientificpeer-review

7 Downloads (Pure)

Editorial: Smelly fumes: volatile-mediated communication between bacteria and other organisms

Weisskopf, L., Garbeva, P. V., Ryu, C-M. & Raaijmakers, J. M., 23 Feb 2016, In : Frontiers in Microbiology. 7, 2031.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
167 Downloads (Pure)

Lessons from 1,3-Hydride Shifts in Sesquiterpene Cyclizations

Rinkel, J., Rabe, P., Garbeva, P. V. & Dickschat, J., 2016, In : Angewandte Chemie. 55, 43, p. 13593-13596

Research output: Contribution to journal/periodicalArticleScientificpeer-review

8 Downloads (Pure)

Microbial small talk: volatiles in fungal-bacterial interactions

Schmidt, R., Etalo, D. N., de Jager, V. C. L., Gerards, S., Zweers, H., De Boer, W. & Garbeva, P. V., 2016, In : Frontiers in Microbiology. 6, 01495.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
287 Downloads (Pure)

Validation of the AlamarBlue® assay as a fast screening method to determine the antimicrobial activity of botanical extracts

Tyc, O., Tomás-Menor, L., Garbeva, P. V., Barrajón-Catalán, E. & Micol, V., 2016, In : PLoS One. 11, 12, e0169090.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
137 Downloads (Pure)
2017

Belowground plant-herbivore interactions vary among climate-driven range-expanding plant species with different degrees of novel chemistry

Wilschut, R. A., Silva, J. C. P., Garbeva, P. V. & van der Putten, W. H., 2017, In : Frontiers in Plant Science. 8, fpls.2017.01861.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
125 Downloads (Pure)

Exploring bacterial interspecific interactions for discovery of novel antimicrobial compounds

Tyc, O., de Jager, V. C. L., Van den Berg, M., Gerards, S., Janssens, T., Zaagman, N., Kai, M., Svatos, A., Zweers, A. J., Hordijk, C. A., Besselink, H., De Boer, W. & Garbeva, P. V., 2017, In : Microbial Biotechnology. 10, 4, p. 910-925

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
282 Downloads (Pure)

Fungal volatile compounds induce production of the secondary metabolite Sodorifen in Serratia plymuthica PRI-2C

Schmidt, R. L., de Jager, V. C. L., Zühlke, D., Wolff, C., Bernhardt, J., Cankar, K., Beekwilder, J., van Ijcken, W., Sleutels, F., De Boer, W., Riedel, K. & Garbeva, P. V., 2017, In : Scientific Reports. 7, 862 .

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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400 Downloads (Pure)

Fungus-associated bacteriome in charge of their host behaviour

Schulz-Bohm, K., Tyc, O., De Boer, W., Peereboom, N., Debets, F., Zaagman, N., Janssens, T. K. S. & Garbeva, P., 2017, In : Fungal Genetics and Biology. 102, p. 38-48

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
269 Downloads (Pure)

Microbial volatiles: Small molecules with an important role in intra- and inter-kingdom interactions

Schulz-Bohm, K., Martín-Sánchez, L. & Garbeva, P. V., 2017, In : Frontiers in Microbiology. 8, 02484.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
366 Downloads (Pure)

Smelly fumes: volatile-mediated communication between bacteria and other organisms: Research Topic

Weisskopf, L. (Guest ed.), Garbeva, P. V. (Guest ed.), Ryu, C-M. (Guest ed.) & Raaijmakers, J. M., Aug 2017, In : Frontiers in Microbiology.

Research output: Contribution to journal/periodicalSpecial issue (editorship)Scientific

Open Access
File
574 Downloads (Pure)

The Antimicrobial Volatile Power of the Rhizospheric Isolate Pseudomonas donghuensis P482.

Ossowicki, A., Jafra, S. & Garbeva, P. V., 2017, In : PLoS One. 12, 3, 174362.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
146 Downloads (Pure)

The Ecological Role of Volatile and Soluble Secondary Metabolites Produced by Soil Bacteria

Tyc, O., Song, C., Dickschat, J., Vos, M. & Garbeva, P. V., 2017, In : Trends in Microbiology. 25, 4, p. 280-292

Research output: Contribution to journal/periodicalArticleScientificpeer-review

15 Downloads (Pure)

The prey’s scent – volatile organic compound mediated interactions between soil bacteria and their protist predators

Schulz-Bohm, K., Geisen, S., Wubs, E. R. J., Song, C., De Boer, W. & Garbeva, P. V., 2017, In : ISME Journal. 11, p. 817-820

Research output: Contribution to journal/periodicalArticleScientificpeer-review

31 Downloads (Pure)
2018

Calling from distance: Attraction of soil bacteria by plant root volatiles

Schulz-Bohm, K., Gerards, S., Hundscheid, M. P. J., Melenhorst, J., De Boer, W. & Garbeva, P. V., 2018, In : ISME Journal. 12

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
4 Downloads (Pure)

Decay of low-density polyethylene by bacteria extracted from earthworm’s guts: a potential for soil restoration

Huerta Lwanga, E., Thapa, B., Yang, X., Gertsen, H., Salánki, T., Geissen, V. & Garbeva, P. V., 2018, In : Science of the Total Environment. 624, p. 753-757

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
400 Downloads (Pure)

Deciphering the genome and secondary metabolome of the plant pathogen Fusarium culmorum

Schmidt, R. L., Durling, M., de Jager, V. C. L., Menezes, R. C., Nordkvist, E., Svatos, A., Dubey, M., Lauterbach, L., Dikschat, J. S., Karlsson, M. & Garbeva, P. V., 2018, In : FEMS Microbiology Ecology. 94, 6, fiy078.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
79 Downloads (Pure)

Growth Promotion and Inhibition Induced by Interactions of Groundwater Bacteria

Geesink, P., Tyc, O., Küsel, K., Taubert, M., van de Velde, C., Kumar, S. & Garbeva, P. V., 2018, In : FEMS Microbiology Ecology. 94, 11, fiy164.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
76 Downloads (Pure)

Healthy scents: microbial volatiles as new frontier in antibiotic research?

Avalos Garcia, M., van Wezel, G. P., Raaijmakers, J. M. & Garbeva, P. V., 2018, In : Current Opinion in Microbiology. 45, October, p. 84-91

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
161 Downloads (Pure)

LAESI mass spectrometry imaging as a tool to differentiate the root metabolome of native and range-expanding plant species

Kulkarni, P., A. Wilschut, R., J.F. Verhoeven, K., H. van der Putten, W. & Garbeva, P., 2018, In : Planta. 248, December, p. 1515-1523

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
204 Downloads (Pure)

Lekker geurtje

Garbeva, P., Schmidt, R. L. & Rienks, F., 14 Dec 2018, Veen Media.

Research output: Other contributionPopularizing

Living apart together – Bacterial volatiles influence methanotrophic growth and activity.

Veraart, A. J., Garbeva, P. V., van Beersum, F., Ho, A., Hordijk, C. A., Meima-Franke, M., Zweers, A. J. & Bodelier, P. L. E., 2018, In : ISME Journal. 12, p. 1163-1166

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
131 Downloads (Pure)

Macro- and micro- plastics in soil-plant system: effects of plastic mulch film residues on wheat (Triticum aestivum) growth.

Qi, Y., Yang, X., Pelaez, A. M., Huerta Lwanga, E., Beriot, N., Gertsen, H., Garbeva, P. V. & Geissen, V., 2018, In : Science of the Total Environment. 645, 15 december 2018, p. 1048-1056

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
155 Downloads (Pure)

The effect of isabelin, a sesquiterpene lactone from Ambrosia artemisiifolia on soil microorganisms and human pathogens

Molinaro, F., Tyc, O., Beekwilder, J., Cankar, K., Bertea, C. M., Negre, M. & Garbeva, P. V., 2018, In : FEMS Microbiology Letters. 365, 4, fny001.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
85 Downloads (Pure)
2019

Biological activities associated with the volatile compound 2,5-bis(1-methylethyl)-pyrazine

Janssens, T. K. S., Tyc, O., Besselink, H., De Boer, W. & Garbeva, P. V., 2019, In : FEMS Microbiology Letters. fnz023.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
74 Downloads (Pure)