20022020

Research output per year

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Research Output

A fragrant neighborhood: Volatile mediated bacterial interactions in soil

Schulz-Bohm, K., Zweers, H., De Boer, W. & Garbeva, P., 2015, In : Frontiers in Microbiology. 6, 01212.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
255 Downloads (Pure)

Airborne medicine - Bacterial volatiles and their influence on plant health: Transley review

Garbeva, P. & Weisskopf, L., 2020, In : New Phytologist. 226, 1, p. 32-43

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
39 Downloads (Pure)

A non-invasive soil based setup to study tomato root volatiles released by healthy and infected roots

Gulati, S., Ballhausen, M-B., Kulkarni, P., Grosch, R. & Garbeva, P., 2020, In : Scientific Reports. 10, 12704.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
19 Downloads (Pure)

Assessment of the diversity, and antagonism towards Rhizoctonia solani AG3, of Pseudomonas species in soil from different agricultural regimes

Garbeva, P. V., Van Veen, J. A. & van Elsas, J. D., 2004, In : FEMS Microbiology Ecology. 47, 1, p. 51-64

Research output: Contribution to journal/periodicalArticleScientificpeer-review

2 Downloads (Pure)

Belowground plant-herbivore interactions vary among climate-driven range-expanding plant species with different degrees of novel chemistry

Wilschut, R. A., Silva, J. C. P., Garbeva, P. V. & van der Putten, W. H., 2017, In : Frontiers in Plant Science. 8, fpls.2017.01861.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
123 Downloads (Pure)

Biological activities associated with the volatile compound 2,5-bis(1-methylethyl)-pyrazine

Janssens, T. K. S., Tyc, O., Besselink, H., De Boer, W. & Garbeva, P. V., 2019, In : FEMS Microbiology Letters. fnz023.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
70 Downloads (Pure)

Calling from distance: Attraction of soil bacteria by plant root volatiles

Schulz-Bohm, K., Gerards, S., Hundscheid, M. P. J., Melenhorst, J., De Boer, W. & Garbeva, P. V., 2018, In : ISME Journal. 12

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
4 Downloads (Pure)

Calling in the Dark: the Role of Volatiles for Communication in the Rhizosphere

van Dam, N. M., Weinhold, A. & Garbeva, P. V., 2016, Deciphering Chemical language of Plant Communication. Springer, p. 175-210 (Signaling and Communication in Plants).

Research output: Chapter in book/volumeChapterScientificpeer-review

7 Downloads (Pure)

Decay of low-density polyethylene by bacteria extracted from earthworm’s guts: a potential for soil restoration

Huerta Lwanga, E., Thapa, B., Yang, X., Gertsen, H., Salánki, T., Geissen, V. & Garbeva, P. V., 2018, In : Science of the Total Environment. 624, p. 753-757

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
398 Downloads (Pure)

Deciphering the genome and secondary metabolome of the plant pathogen Fusarium culmorum

Schmidt, R. L., Durling, M., de Jager, V. C. L., Menezes, R. C., Nordkvist, E., Svatos, A., Dubey, M., Lauterbach, L., Dikschat, J. S., Karlsson, M. & Garbeva, P. V., 2018, In : FEMS Microbiology Ecology. 94, 6, fiy078.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
79 Downloads (Pure)

Draft Genome Sequence of Pedobacter sp. Strain V48, Isolated from a Coastal Sand Dune in the Netherlands

Bitzer, A. S., Garbeva, P. V. & Silby, M. W., 2014, In : Genome Announcements. 2, 1, e00094-14.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
288 Downloads (Pure)

Draft Genome Sequence of the Antagonistic Rhizosphere Bacterium Serratia plymuthica Strain PRI-2C

Garbeva, P. V., Van Elsas, J. D. & De Boer, W., 2012, In : Journal of Bacteriology. 194, 15, p. 4119-4120

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
380 Downloads (Pure)

Editorial: Smelly fumes: volatile-mediated communication between bacteria and other organisms

Weisskopf, L., Garbeva, P. V., Ryu, C-M. & Raaijmakers, J. M., 23 Feb 2016, In : Frontiers in Microbiology. 7, 2031.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
165 Downloads (Pure)

Effect of above-ground plant species on soil microbial community structure and its impact on suppression of Rhizoctonia solani AG3

Garbeva, P. V., Postma, J., Van Veen, J. A. & van Elsas, J. D., 2006, In : Environmental Microbiology. 8, 2, p. 233-246

Research output: Contribution to journal/periodicalArticleScientificpeer-review

3 Downloads (Pure)

Effects of agronomical measures on the microbial deversity of soils as related to the suppression of soil-borne plant pathogens

Van Elsas, J. D., Garbeva, P. V. & Salles, J., 2002, In : Biodegradation. 13, 1, p. 29-40

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Effects of plastic mulch film residues on wheat rhizosphere and soil properties

Qi, Y., Ossowicki, A., Yang, X., Huerta Lwanga, E., Dini-Andreote, F., Geissen, V. & Garbeva, P., 2020, In : Journal of Hazardous Materials. 387, 121711.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
209 Downloads (Pure)

Exploring bacterial interspecific interactions for discovery of novel antimicrobial compounds

Tyc, O., de Jager, V. C. L., Van den Berg, M., Gerards, S., Janssens, T., Zaagman, N., Kai, M., Svatos, A., Zweers, A. J., Hordijk, C. A., Besselink, H., De Boer, W. & Garbeva, P. V., 2017, In : Microbial Biotechnology. 10, 4, p. 910-925

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
281 Downloads (Pure)

Exploring the genomic traits of fungus-feeding bacterial genus Collimonas

Song, C., Schmidt, R. L., de Jager, V. C. L., Krzyzanowska, D., Jongedijk, E., Cankar, K., Beekwilder, J., van Veen, A., De Boer, W., van Veen, J. A. & Garbeva, P. V., 2015, In : BMC Genomics. 16, 1103.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
224 Downloads (Pure)

Fungal volatile compounds induce production of the secondary metabolite Sodorifen in Serratia plymuthica PRI-2C

Schmidt, R. L., de Jager, V. C. L., Zühlke, D., Wolff, C., Bernhardt, J., Cankar, K., Beekwilder, J., van Ijcken, W., Sleutels, F., De Boer, W., Riedel, K. & Garbeva, P. V., 2017, In : Scientific Reports. 7, 862 .

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
399 Downloads (Pure)

Fungistasis and general soil biostasis - A new synthesis.

Garbeva, P. V., Hol, W. H. G., Termorshuizen, A. J., Kowalchuk, G. A. & De Boer, W., 2011, In : Soil Biology & Biochemistry. 43, 3, p. 469-477

Research output: Contribution to journal/periodicalArticleScientificpeer-review

3 Downloads (Pure)

Fungus-associated bacteriome in charge of their host behaviour

Schulz-Bohm, K., Tyc, O., De Boer, W., Peereboom, N., Debets, F., Zaagman, N., Janssens, T. K. S. & Garbeva, P., 2017, In : Fungal Genetics and Biology. 102, p. 38-48

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
269 Downloads (Pure)

Growth Promotion and Inhibition Induced by Interactions of Groundwater Bacteria

Geesink, P., Tyc, O., Küsel, K., Taubert, M., van de Velde, C., Kumar, S. & Garbeva, P. V., 2018, In : FEMS Microbiology Ecology. 94, 11, fiy164.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
76 Downloads (Pure)

Healthy scents: microbial volatiles as new frontier in antibiotic research?

Avalos Garcia, M., van Wezel, G. P., Raaijmakers, J. M. & Garbeva, P. V., 2018, In : Current Opinion in Microbiology. 45, October, p. 84-91

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
155 Downloads (Pure)

Impact of interspecific interactions on antimicrobial activity among soil bacteria

Tyc, O., Van den Berg, M., Gerards, S., Van Veen, J. A., Raaijmakers, J., De Boer, W. & Garbeva, P., 2014, In : Frontiers in Microbiology. 5, 567.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
524 Downloads (Pure)

Inter-specific interactions between carbon-limited soil bacteria affect behavior and gene expression

Garbeva, P. V. & De Boer, W., 2009, In : Microbial Ecology. 58, 1, p. 36-46

Research output: Contribution to journal/periodicalArticleScientificpeer-review

6 Downloads (Pure)

Investigating the effect of belowground microbial volatiles on plant nutrient status: perspective and limitations

Martín-Sánchez, L., Ariotti, C., Garbeva, P. & Vigani, G., 2020, In : Journal of Plant Interactions. 15, 1, p. 188-195

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
31 Downloads (Pure)

LAESI mass spectrometry imaging as a tool to differentiate the root metabolome of native and range-expanding plant species

Kulkarni, P., A. Wilschut, R., J.F. Verhoeven, K., H. van der Putten, W. & Garbeva, P., 2018, In : Planta. 248, December, p. 1515-1523

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
201 Downloads (Pure)

Lekker geurtje

Garbeva, P., Schmidt, R. L. & Rienks, F., 14 Dec 2018, Veen Media.

Research output: Other contributionPopularizing

Lessons from 1,3-Hydride Shifts in Sesquiterpene Cyclizations

Rinkel, J., Rabe, P., Garbeva, P. V. & Dickschat, J., 2016, In : Angewandte Chemie. 55, 43, p. 13593-13596

Research output: Contribution to journal/periodicalArticleScientificpeer-review

8 Downloads (Pure)

Living apart together – Bacterial volatiles influence methanotrophic growth and activity.

Veraart, A. J., Garbeva, P. V., van Beersum, F., Ho, A., Hordijk, C. A., Meima-Franke, M., Zweers, A. J. & Bodelier, P. L. E., 2018, In : ISME Journal. 12, p. 1163-1166

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
131 Downloads (Pure)

Macro- and micro- plastics in soil-plant system: effects of plastic mulch film residues on wheat (Triticum aestivum) growth.

Qi, Y., Yang, X., Pelaez, A. M., Huerta Lwanga, E., Beriot, N., Gertsen, H., Garbeva, P. V. & Geissen, V., 2018, In : Science of the Total Environment. 645, 15 december 2018, p. 1048-1056

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
143 Downloads (Pure)

Microbail diversity in soil: selection of microbial populations by plant and soil type and implications for disease suppressiveness

Garbeva, P. V., Van Veen, J. A. & van Elsas, J. D., 2004, In : Annual Review of Phytopathology. 42, p. 243-270

Research output: Contribution to journal/periodicalArticleScientificpeer-review

9 Downloads (Pure)

Microbe-driven chemical ecology – past, present and future

Schmidt, R. L., Ulanova, D., Wick, L. Y., Bode, H. B. & Garbeva, P. V., 2019, In : ISME Journal. 13, p. 2656-2663

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
153 Downloads (Pure)

Microbial and volatile profiling of soils suppressive to Fusarium culmorum of wheat

Ossowicki, A., Tracanna, V., Petrus, M. L. C., van Wezel, G., Raaijmakers, J. M., Medema, M. H. & Garbeva, P., 2020, In : Proceedings of the Royal Society B-Biological Sciences. 287, 1921, 20192527.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

3 Downloads (Pure)

Microbial small talk: volatiles in fungal-bacterial interactions

Schmidt, R., Etalo, D. N., de Jager, V. C. L., Gerards, S., Zweers, H., De Boer, W. & Garbeva, P. V., 2016, In : Frontiers in Microbiology. 6, 01495.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
285 Downloads (Pure)

Microbial volatiles: Small molecules with an important role in intra- and inter-kingdom interactions

Schulz-Bohm, K., Martín-Sánchez, L. & Garbeva, P. V., 2017, In : Frontiers in Microbiology. 8, 02484.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
366 Downloads (Pure)

No apparent costs for facultative antibiotic production by the soil bacterium Pseudomonas fluorescens Pf0-1

Garbeva, P. V., Tyc, O., Remus-Emsermann, M. N. P., Van der Wal, A., Vos, M., Silby, M. W. & De Boer, W., 2011, In : PLoS One. 6, 11, e27266.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
375 Downloads (Pure)

Non-random species loss in bacterial communities reduces antifungal volatile production

Hol, G., Garbeva, P., Hordijk, C., Hundscheid, M. P. J., Klein Gunnewiek, P. J. A., Van Agtmaal, M., Kuramae, E. E. & De Boer, W., 2015, In : Ecology. 96, 8, p. 2042-2048

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
379 Downloads (Pure)

Pathogen suppression by microbial volatile organic compounds in soils

De Boer, W., Li, X. G., Meisner, A. & Garbeva, P. V., 2019, In : FEMS Microbiology Ecology. 95, 8, fiz105.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

4 Downloads (Pure)

Phylogenomic analyses and distribution of terpene synthases among Streptomyces

Martín-Sánchez, L., Saurabh Singh, K., Avalos Garcia, M., van Wezel, G. P., Dickschat, J. S. & Garbeva, P. V., 2019, In : Beilstein Journal of Organic Chemistry. 15, p. 1181–1193

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
158 Downloads (Pure)

Predominant Bacillus spp. in agricultural soil under different management regimes detected via PCR-DGGE

Garbeva, P. V., Van Veen, J. A. & Van Elsas, J. D., 2003, In : Microbial Ecology. 45, 3, p. 302-316

Research output: Contribution to journal/periodicalArticleScientificpeer-review

5 Downloads (Pure)

Production of glycine-derived ammonia as a low-cost and long-distance antibiotic strategy by Streptomyces

Avalos, M., Garbeva, P., Raaijmakers, J. M. & van Wezel, G. P., 2020, In : ISME Journal. 14, p. 568-583

Research output: Contribution to journal/periodicalArticleScientificpeer-review

File
82 Downloads (Pure)

Quantitative detection and diversity of the pyrrolnitrin biosynthetic locus in soil under different treatments

Garbeva, P. V., Voesenek, K. & van Elsas, J. D., 2004, In : Soil Biology & Biochemistry. 36, 9, p. 1453-1463

Research output: Contribution to journal/periodicalArticleScientificpeer-review

4 Downloads (Pure)

Rhizosphere microbial community and its response to plant species and soil history

Garbeva, P. V., van Elsas, J. D. & Van Veen, J. A., 2008, In : Plant and Soil. 302, 1-2, p. 19-32

Research output: Contribution to journal/periodicalArticleScientificpeer-review

4 Downloads (Pure)

Root traits and belowground herbivores relate to plant-soil feedback variation among congeners

Wilschut, R. A., van der Putten, W. H., Garbeva, P. V., Harkes, P., Konings, W., Kulkarni, P., Martens, H. J. & Geisen, S., 2019, In : Nature Communications. 10, 1564(2019).

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
158 Downloads (Pure)

Smelly fumes: volatile-mediated communication between bacteria and other organisms: Research Topic

Weisskopf, L. (Guest ed.), Garbeva, P. V. (Guest ed.), Ryu, C-M. (Guest ed.) & Raaijmakers, J. M., Aug 2017, In : Frontiers in Microbiology.

Research output: Contribution to journal/periodicalSpecial issue (editorship)Scientific

Open Access
File
572 Downloads (Pure)

The Antimicrobial Volatile Power of the Rhizospheric Isolate Pseudomonas donghuensis P482.

Ossowicki, A., Jafra, S. & Garbeva, P. V., 2017, In : PLoS One. 12, 3, 174362.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
144 Downloads (Pure)

The ecological role of bacterial seed endophytes associated with wild cabbage in the United Kingdom

Tyc, O., Putra, R., Gols, R., Harvey, J. A. & Garbeva, P., 2020, In : MicrobiologyOpen. 9, 1, e00954.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
125 Downloads (Pure)

The Ecological Role of Volatile and Soluble Secondary Metabolites Produced by Soil Bacteria

Tyc, O., Song, C., Dickschat, J., Vos, M. & Garbeva, P. V., 2017, In : Trends in Microbiology. 25, 4, p. 280-292

Research output: Contribution to journal/periodicalArticleScientificpeer-review

15 Downloads (Pure)