20022020

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2020

Airborne medicine - Bacterial volatiles and their influence on plant health: Transley review

Garbeva, P. & Weisskopf, L., 2020, In : New Phytologist. 226, 1, p. 32-43

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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28 Downloads (Pure)

A non-invasive soil based setup to study tomato root volatiles released by healthy and infected roots

Gulati, S., Ballhausen, M-B., Kulkarni, P., Grosch, R. & Garbeva, P., 2020, In : Scientific Reports. 10, 12704.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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15 Downloads (Pure)

Effects of plastic mulch film residues on wheat rhizosphere and soil properties

Qi, Y., Ossowicki, A., Yang, X., Huerta Lwanga, E., Dini-Andreote, F., Geissen, V. & Garbeva, P., 2020, In : Journal of Hazardous Materials. 387, 121711.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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177 Downloads (Pure)

Investigating the effect of belowground microbial volatiles on plant nutrient status: perspective and limitations

Martín-Sánchez, L., Ariotti, C., Garbeva, P. & Vigani, G., 2020, In : Journal of Plant Interactions. 15, 1, p. 188-195

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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13 Downloads (Pure)

Microbial and volatile profiling of soils suppressive to Fusarium culmorum of wheat

Ossowicki, A., Tracanna, V., Petrus, M. L. C., van Wezel, G., Raaijmakers, J. M., Medema, M. H. & Garbeva, P., 2020, In : Proceedings of the Royal Society B-Biological Sciences. 287, 1921, 20192527.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

3 Downloads (Pure)

Production of glycine-derived ammonia as a low-cost and long-distance antibiotic strategy by Streptomyces

Avalos, M., Garbeva, P., Raaijmakers, J. M. & van Wezel, G. P., 2020, In : ISME Journal. 14, p. 568-583

Research output: Contribution to journal/periodicalArticleScientificpeer-review

File
46 Downloads (Pure)

The ecological role of bacterial seed endophytes associated with wild cabbage in the United Kingdom

Tyc, O., Putra, R., Gols, R., Harvey, J. A. & Garbeva, P., 2020, In : MicrobiologyOpen. 9, 1, e00954.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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112 Downloads (Pure)

Volatile-mediated antagonism of soil bacterial communities against fungi

Li, X. G., Garbeva, P., Liu, X., Klein Gunnewiek, P. J. A., Clocchiatti, A., Hundscheid, M. P. J., Wang, X. & De Boer, W., 2020, In : Environmental Microbiology. 22, 3, p. 1025-1035

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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51 Downloads (Pure)
2019

Biological activities associated with the volatile compound 2,5-bis(1-methylethyl)-pyrazine

Janssens, T. K. S., Tyc, O., Besselink, H., De Boer, W. & Garbeva, P. V., 2019, In : FEMS Microbiology Letters. fnz023.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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52 Downloads (Pure)

Microbe-driven chemical ecology – past, present and future

Schmidt, R. L., Ulanova, D., Wick, L. Y., Bode, H. B. & Garbeva, P. V., 2019, In : ISME Journal. 13, p. 2656-2663

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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123 Downloads (Pure)

Pathogen suppression by microbial volatile organic compounds in soils

De Boer, W., Li, X. G., Meisner, A. & Garbeva, P. V., 2019, In : FEMS Microbiology Ecology. 95, 8, fiz105.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

4 Downloads (Pure)

Phylogenomic analyses and distribution of terpene synthases among Streptomyces

Martín-Sánchez, L., Saurabh Singh, K., Avalos Garcia, M., van Wezel, G. P., Dickschat, J. S. & Garbeva, P. V., 2019, In : Beilstein Journal of Organic Chemistry. 15, p. 1181–1193

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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146 Downloads (Pure)

Root traits and belowground herbivores relate to plant-soil feedback variation among congeners

Wilschut, R. A., van der Putten, W. H., Garbeva, P. V., Harkes, P., Konings, W., Kulkarni, P., Martens, H. J. & Geisen, S., 2019, In : Nature Communications. 10, 1564(2019).

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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147 Downloads (Pure)
2018

Calling from distance: Attraction of soil bacteria by plant root volatiles

Schulz-Bohm, K., Gerards, S., Hundscheid, M. P. J., Melenhorst, J., De Boer, W. & Garbeva, P. V., 2018, In : ISME Journal. 12

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
4 Downloads (Pure)

Decay of low-density polyethylene by bacteria extracted from earthworm’s guts: a potential for soil restoration

Huerta Lwanga, E., Thapa, B., Yang, X., Gertsen, H., Salánki, T., Geissen, V. & Garbeva, P. V., 2018, In : Science of the Total Environment. 624, p. 753-757

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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381 Downloads (Pure)

Deciphering the genome and secondary metabolome of the plant pathogen Fusarium culmorum

Schmidt, R. L., Durling, M., de Jager, V. C. L., Menezes, R. C., Nordkvist, E., Svatos, A., Dubey, M., Lauterbach, L., Dikschat, J. S., Karlsson, M. & Garbeva, P. V., 2018, In : FEMS Microbiology Ecology. 94, 6, fiy078.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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70 Downloads (Pure)

Growth Promotion and Inhibition Induced by Interactions of Groundwater Bacteria

Geesink, P., Tyc, O., Küsel, K., Taubert, M., van de Velde, C., Kumar, S. & Garbeva, P. V., 2018, In : FEMS Microbiology Ecology. 94, 11, fiy164.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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70 Downloads (Pure)

Healthy scents: microbial volatiles as new frontier in antibiotic research?

Avalos Garcia, M., van Wezel, G. P., Raaijmakers, J. M. & Garbeva, P. V., 2018, In : Current Opinion in Microbiology. 45, October, p. 84-91

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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152 Downloads (Pure)

LAESI mass spectrometry imaging as a tool to differentiate the root metabolome of native and range-expanding plant species

Kulkarni, P., A. Wilschut, R., J.F. Verhoeven, K., H. van der Putten, W. & Garbeva, P., 2018, In : Planta. 248, December, p. 1515-1523

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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185 Downloads (Pure)

Living apart together – Bacterial volatiles influence methanotrophic growth and activity.

Veraart, A. J., Garbeva, P. V., van Beersum, F., Ho, A., Hordijk, C. A., Meima-Franke, M., Zweers, A. J. & Bodelier, P. L. E., 2018, In : ISME Journal. 12, p. 1163-1166

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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127 Downloads (Pure)

Macro- and micro- plastics in soil-plant system: effects of plastic mulch film residues on wheat (Triticum aestivum) growth.

Qi, Y., Yang, X., Pelaez, A. M., Huerta Lwanga, E., Beriot, N., Gertsen, H., Garbeva, P. V. & Geissen, V., 2018, In : Science of the Total Environment. 645, 15 december 2018, p. 1048-1056

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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96 Downloads (Pure)

The effect of isabelin, a sesquiterpene lactone from Ambrosia artemisiifolia on soil microorganisms and human pathogens

Molinaro, F., Tyc, O., Beekwilder, J., Cankar, K., Bertea, C. M., Negre, M. & Garbeva, P. V., 2018, In : FEMS Microbiology Letters. 365, 4, fny001.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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81 Downloads (Pure)
2017

Belowground plant-herbivore interactions vary among climate-driven range-expanding plant species with different degrees of novel chemistry

Wilschut, R. A., Silva, J. C. P., Garbeva, P. V. & van der Putten, W. H., 2017, In : Frontiers in Plant Science. 8, fpls.2017.01861.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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111 Downloads (Pure)

Exploring bacterial interspecific interactions for discovery of novel antimicrobial compounds

Tyc, O., de Jager, V. C. L., Van den Berg, M., Gerards, S., Janssens, T., Zaagman, N., Kai, M., Svatos, A., Zweers, A. J., Hordijk, C. A., Besselink, H., De Boer, W. & Garbeva, P. V., 2017, In : Microbial Biotechnology. 10, 4, p. 910-925

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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268 Downloads (Pure)

Fungal volatile compounds induce production of the secondary metabolite Sodorifen in Serratia plymuthica PRI-2C

Schmidt, R. L., de Jager, V. C. L., Zühlke, D., Wolff, C., Bernhardt, J., Cankar, K., Beekwilder, J., van Ijcken, W., Sleutels, F., De Boer, W., Riedel, K. & Garbeva, P. V., 2017, In : Scientific Reports. 7, 862 .

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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390 Downloads (Pure)

Fungus-associated bacteriome in charge of their host behaviour

Schulz-Bohm, K., Tyc, O., De Boer, W., Peereboom, N., Debets, F., Zaagman, N., Janssens, T. K. S. & Garbeva, P., 2017, In : Fungal Genetics and Biology. 102, p. 38-48

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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262 Downloads (Pure)

Microbial volatiles: Small molecules with an important role in intra- and inter-kingdom interactions

Schulz-Bohm, K., Martín-Sánchez, L. & Garbeva, P. V., 2017, In : Frontiers in Microbiology. 8, 02484.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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363 Downloads (Pure)

The Antimicrobial Volatile Power of the Rhizospheric Isolate Pseudomonas donghuensis P482.

Ossowicki, A., Jafra, S. & Garbeva, P. V., 2017, In : PLoS One. 12, 3, 174362.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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139 Downloads (Pure)

The Ecological Role of Volatile and Soluble Secondary Metabolites Produced by Soil Bacteria

Tyc, O., Song, C., Dickschat, J., Vos, M. & Garbeva, P. V., 2017, In : Trends in Microbiology. 25, 4, p. 280-292

Research output: Contribution to journal/periodicalArticleScientificpeer-review

15 Downloads (Pure)

The prey’s scent – volatile organic compound mediated interactions between soil bacteria and their protist predators

Schulz-Bohm, K., Geisen, S., Wubs, E. R. J., Song, C., De Boer, W. & Garbeva, P. V., 2017, In : ISME Journal. 11, p. 817-820

Research output: Contribution to journal/periodicalArticleScientificpeer-review

31 Downloads (Pure)
2016

Lessons from 1,3-Hydride Shifts in Sesquiterpene Cyclizations

Rinkel, J., Rabe, P., Garbeva, P. V. & Dickschat, J., 2016, In : Angewandte Chemie. 55, 43, p. 13593-13596

Research output: Contribution to journal/periodicalArticleScientificpeer-review

8 Downloads (Pure)

Microbial small talk: volatiles in fungal-bacterial interactions

Schmidt, R., Etalo, D. N., de Jager, V. C. L., Gerards, S., Zweers, H., De Boer, W. & Garbeva, P. V., 2016, In : Frontiers in Microbiology. 6, 01495.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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268 Downloads (Pure)

Smelly fumes: volatile-mediated communication between bacteria and other organisms

Weisskopf, L., Garbeva, P. V., Ryu, C-M. & Raaijmakers, J. M., 23 Feb 2016, In : Frontiers in Microbiology. 7, 2031.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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146 Downloads (Pure)

Validation of the AlamarBlue® assay as a fast screening method to determine the antimicrobial activity of botanical extracts

Tyc, O., Tomás-Menor, L., Garbeva, P. V., Barrajón-Catalán, E. & Micol, V., 2016, In : PLoS One. 11, 12, e0169090.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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132 Downloads (Pure)
2015

A fragrant neighborhood: Volatile mediated bacterial interactions in soil

Schulz-Bohm, K., Zweers, H., De Boer, W. & Garbeva, P., 2015, In : Frontiers in Microbiology. 6, 01212.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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237 Downloads (Pure)

Exploring the genomic traits of fungus-feeding bacterial genus Collimonas

Song, C., Schmidt, R. L., de Jager, V. C. L., Krzyzanowska, D., Jongedijk, E., Cankar, K., Beekwilder, J., van Veen, A., De Boer, W., van Veen, J. A. & Garbeva, P. V., 2015, In : BMC Genomics. 16, 1103.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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213 Downloads (Pure)

Non-random species loss in bacterial communities reduces antifungal volatile production

Hol, G., Garbeva, P., Hordijk, C., Hundscheid, M. P. J., Klein Gunnewiek, P. J. A., Van Agtmaal, M., Kuramae, E. E. & De Boer, W., 2015, In : Ecology. 96, 8, p. 2042-2048

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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362 Downloads (Pure)

The effect of phylogenetically different bacteria on the fitness of Pseudomonas fluorescens in sand microcosms

Tyc, O., Wolf, A. & Garbeva, P., 2015, In : PLoS One. 10, 3, e0119838.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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159 Downloads (Pure)

Volatile affairs in microbial interactions

Schmidt, R., Cordovez, V., De Boer, W., Raaijmakers, J. & Garbeva, P., 2015, In : ISME Journal. 9, p. 2329-2335

Research output: Contribution to journal/periodicalArticleScientificpeer-review

15 Downloads (Pure)

Volatiles in inter-specific bacterial interactions

Tyc, O., Zweers, H., De Boer, W. & Garbeva, P. V., 2015, In : Frontiers in Microbiology. 6, 2015.01412.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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588 Downloads (Pure)
2014

Draft Genome Sequence of Pedobacter sp. Strain V48, Isolated from a Coastal Sand Dune in the Netherlands

Bitzer, A. S., Garbeva, P. V. & Silby, M. W., 2014, In : Genome Announcements. 2, 1, e00094-14.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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279 Downloads (Pure)

Impact of interspecific interactions on antimicrobial activity among soil bacteria

Tyc, O., Van den Berg, M., Gerards, S., Van Veen, J. A., Raaijmakers, J., De Boer, W. & Garbeva, P., 2014, In : Frontiers in Microbiology. 5, 567.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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498 Downloads (Pure)

Volatile-mediated interactions between phylogenetically different soil bacteria

Garbeva, P. V., Hordijk, C. A., Gerards, S. & De Boer, W., 2014, In : Frontiers in Microbiology. 5, p. 289

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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604 Downloads (Pure)

Volatiles produced by the mycophagous soil bacterium Collimonas

Garbeva, P. V., Hordijk, C. A., Gerards, S. & De Boer, W., 2014, In : FEMS Microbiology Ecology. 87, 3, p. 639-649

Research output: Contribution to journal/periodicalArticleScientificpeer-review

17 Downloads (Pure)
2013

The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms

Mendes, R., Garbeva, P. V. & Raaijmakers, J. M., 2013, In : FEMS Microbiology Reviews. 37, 5, p. 634-663

Research output: Contribution to journal/periodicalArticleScientificpeer-review

8 Downloads (Pure)
2012

Draft Genome Sequence of the Antagonistic Rhizosphere Bacterium Serratia plymuthica Strain PRI-2C

Garbeva, P. V., Van Elsas, J. D. & De Boer, W., 2012, In : Journal of Bacteriology. 194, 15, p. 4119-4120

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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308 Downloads (Pure)
2011

Fungistasis and general soil biostasis - A new synthesis.

Garbeva, P. V., Hol, W. H. G., Termorshuizen, A. J., Kowalchuk, G. A. & De Boer, W., 2011, In : Soil Biology & Biochemistry. 43, 3, p. 469-477

Research output: Contribution to journal/periodicalArticleScientificpeer-review

3 Downloads (Pure)

No apparent costs for facultative antibiotic production by the soil bacterium Pseudomonas fluorescens Pf0-1

Garbeva, P. V., Tyc, O., Remus-Emsermann, M. N. P., Van der Wal, A., Vos, M., Silby, M. W. & De Boer, W., 2011, In : PLoS One. 6, 11, e27266.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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358 Downloads (Pure)

Transcriptional and antagonistic responses of Pseudomonas fluorescens Pf0-1 to phylogenetically different bacterial competitors

Garbeva, P. V., Silby, M. W., Raaijmakers, J. M., Levy, S. & De Boer, W., 2011, In : ISME Journal. 5, 6, p. 973-985

Research output: Contribution to journal/periodicalArticleScientificpeer-review

4 Downloads (Pure)
2009

Inter-specific interactions between carbon-limited soil bacteria affect behavior and gene expression

Garbeva, P. V. & De Boer, W., 2009, In : Microbial Ecology. 58, 1, p. 36-46

Research output: Contribution to journal/periodicalArticleScientificpeer-review

6 Downloads (Pure)