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• 2020

  Engineering of primary carbon metabolism in filamentous fungi

  Chroumpi, T., Makela, M. R. & de Vries, R. P., Nov 2020, In: BIOTECHNOLOGY ADVANCES. 43

  Research output: Contribution to journal/periodical › Book/Film/Article review › Scientific

• Enhancing Evolution: Charting regulatory changes across primate evolution

  Castelijns, B., 12 Nov 2020, Utrecht University.

  Research output: PhD Thesis › PhD thesis

• ENIGMA and global neuroscience: A decade of large-scale studies of the brain in health and disease across more than 40 countries

  Thompson, P. M. & Jahanshad, N., 08 Jan 2020, In: Translational Psychiatry. 10, 1, p. 100

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  File

  • Neurosciences
  • Neuroimaging
  • Meta-Analysis
  • Health
  • Brain
  193 Downloads (Pure)

• ENIGMA MDD: seven years of global neuroimaging studies of major depression through worldwide data sharing

  Schmaal, L., Pozzi, E., C Ho, T., van Velzen, L. S., Veer, I. M., Opel, N., Van Someren, E. J. W., Han, L. K. M., Aftanas, L., Aleman, A., Baune, B. T., Berger, K., Blanken, T. F., Capitão, L., Couvy-Duchesne, B., R Cullen, K., Dannlowski, U., Davey, C., Erwin-Grabner, T., Evans, J. & 58 others, Frodl, T., Fu, C. H. Y., Godlewska, B., Gotlib, I. H., Goya-Maldonado, R., Grabe, H. J., Groenewold, N. A., Grotegerd, D., Gruber, O., Gutman, B. A., Hall, G. B., Harrison, B. J., Hatton, S. N., Hermesdorf, M., Hickie, I. B., Hilland, E., Irungu, B., Jonassen, R., Kelly, S., Kircher, T., Klimes-Dougan, B., Krug, A., Landrø, N. I., Lagopoulos, J., Leerssen, J., Li, M., Linden, D. E. J., MacMaster, F. P., M McIntosh, A., Mehler, D. M. A., Nenadić, I., Penninx, B. W. J. H., Portella, M. J., Reneman, L., Rentería, M. E., Sacchet, M. D., G Sämann, P., Schrantee, A., Sim, K., Soares, J. C., Stein, D. J., Tozzi, L., van Der Wee, N. J. A., van Tol, M-J., Vermeiren, R., Vives-Gilabert, Y., Walter, H., Walter, M., Whalley, H. C., Wittfeld, K., Whittle, S., Wright, M. J., Yang, T. T., Zarate, C., Thomopoulos, S. I., Jahanshad, N., Thompson, P. M. & Veltman, D. J., 2020, In: Translational Psychiatry. 10, 1, p. 172

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  File

  • Information Dissemination
  • Major Depressive Disorder
  • Neuroimaging
  • Depression
  • Brain
  65 Downloads (Pure)

• Enriching the lives of Amsterdam’s diamond workers

  de Ruijter, E. H. J. L., 2020, In: On the Waterfront: Newsletter of the Friends of the IISH. 40

  Research output: Contribution to journal/periodical › Article › Professional

• Enteroendocrine Dynamics - New Tools Reveal Hormonal Plasticity in the Gut

  Beumer, J., Gehart, H. & Clevers, H., 01 Oct 2020, In: Endocrine connections. 41, 5

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Enteroendocrine Cells
  • Organoids
  • Bone Morphogenetic Proteins
  • Endocrine Cells
  • Adult Stem Cells

• Entre el discurso maternalista y la emancipación de las mujeres. El Partido Socialista Argentino y la organización de las trabajadoras a comienzos del siglo XX

  Poy, L., May 2020, In: Revista de Historia Americana y Argentina. 55, 1, p. 155-186

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  File

  • Socialist Party
  • Emancipation
  • Discourse
  • Workers
  • Socialism
  4 Downloads (Pure)

• EOSC-SYNERGY. EU DELIVERABLE: D3.3 Intermediate report on technical framework for FAIR principles implementation

  Coen, G., Steinhoff, W., Tykhonov, V., Bernal, I., Aguilar, F., Azevedo, A. & Bernardo, S., 27 Aug 2020, 41 p.

  Research output: Book/Report › Report › Scientific

  Open Access

  • Quality assurance

• EOSC-SYNERGY Landscaping Country Report: The Netherlands

  Doorn, P. K., 12 Oct 2020, 54 p.

  Research output: Working paper/discussion paper › Working paper/Discussion paper › Professional

  File

  • landscaping
  • infrastructure
  • Netherlands
  • funding
  2 Downloads (Pure)

• Epidemiology of candidemia in Shiraz, southern Iran: A prospective multicenter study (2016-2018)

  Arastehfar, A., Yazdanpanah, S., Bakhtiari, M., Fang, W., Pan, W., Mahmoudi, S., Pakshir, K., Daneshnia, F., Boekhout, T., Ilkit, M., Perlin, D. S., Zomorodian, K. & Zand, F., 21 Jul 2020, In: Medical Mycology.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Candidemia
  • Iran
  • Multicenter Studies
  • Epidemiology
  • Azoles

• Epidemiology of yeast species causing bloodstream infection in Tehran, Iran (2015-2017); superiority of 21-plex PCR over the Vitek 2 system for yeast identification

  Kord, M., Salehi, M., Khodavaisy, S., Hashemi, S. J., Daie Ghazvini, R., Rezaei, S., Maleki, A., Elmimoghaddam, A., Alijani, N., Abdollahi, A., Doomanlou, M., Ahmadikia, K., Rashidi, N., Pan, W., Boekhout, T. & Arastehfar, A., May 2020, In: Journal of Medical Microbiology. 69, 5, p. 712-720 9 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Iran
  • Yeasts
  • Epidemiology
  • Polymerase Chain Reaction
  • Infection

• epiGBS2: an improved protocol and automated snakemake workflow for highly multiplexed reduced representation bisulfite sequencing

  Gawehns, F., Postuma, M., van Gurp, T. P., Wagemaker, N. C. A. M., Fatma, S., Van Antro, M., Mateman, C., Milanovic-Ivanovic, S., van Oers, K., Grosse, I., Vergeer, P. & Verhoeven, K. J. F., 2020, Cold Spring Harbor Laboratory Press, (bioRxiv).

  Research output: Working paper/discussion paper › Preprint

  Open Access

  • bisulfites
  • bioinformatics
  • protocols
  • cytosine
  • reproducibility

• Epigenetic Analyses of Human Left Atrial Tissue Identifies Gene Networks Underlying Atrial Fibrillation

  Hall, A. W., Chaffin, M., Roselli, C., Lin, H., Lubitz, S. A., Bianchi, V., Geeven, G., Bedi, K., Margulies, K. B., de Laat, W., Tucker, N. R. & Ellinor, P. T., Dec 2020, In: Circulation: Genomic and precision medicine. 13, 6, p. e003085

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Gene Regulatory Networks
  • Atrial Fibrillation
  • Epigenomics
  • Chromatin
  • Heart Atria

• Epigenetic and Transcriptional Networks Underlying Atrial Fibrillation

  van Ouwerkerk, A. F., Hall, A. W., Kadow, Z. A., Lazarevic, S., Reyat, J. S., Tucker, N. R., Nadadur, R. D., Bosada, F. M., Bianchi, V., Ellinor, P. T., Fabritz, L., Martin, J. F., de Laat, W., Kirchhof, P., Moskowitz, I. P. & Christoffels, V. M., 19 Jun 2020, In: Circulation Research. 127, 1, p. 34-50 17 p.

  Research output: Contribution to journal/periodical › Book/Film/Article review › Scientific

  • Gene Regulatory Networks
  • Atrial Fibrillation
  • Epigenomics
  • Transcription Factors
  • Genome-Wide Association Study

• Epigenetics of animal personality: DNA methylation cannot explain the heritability of exploratory behavior in a songbird

  van Oers, K., Sepers, B., Sies, W., Gawehns - Bruning, F. K. K., Verhoeven, K. & Laine, V., 2020, In: Integrative and Comparative Biology. 60, 6, 14 p., icaa138.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  File

  • songbirds
  • personality
  • DNA methylation
  • epigenetics
  • heritability
  13 Downloads (Pure)

• Erasmus: Elementair deeltje 75

  Bloemendal, J., 2020, Athenaeum, Polak & Van Gennep. (Elementaire deeltjes)

  Research output: Book/Report › Book › Professional

• Erasmus and His Paraphrases on the New Testament: What Kind of Enterprise?

  Bloemendal, J., 2020, In: Erasmus Studies. 40, 1, p. 34-54 20 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Erasmus
  • Paraphrase
  • New Testament
  • Enterprise

• Ere wie ere toekomt: De moeizame totstandkoming van de Erelijst van Gevallenen 1940-1945

  van Heijningen, R., 2020, Oorlog in onderzoek: 75 jaar NIOD. Bakker, M., Drenth, P., Kemperman, J. & Piersma, H. (eds.). Amsterdam: Boom Uitgevers, p. 23-28

  Research output: Chapter in book/volume › Chapter › Popularizing

  Open Access

  File
  2 Downloads (Pure)

• Erfgoed ís verandering

  Ribbens, C. R., 21 Jul 2020, 3 ed., Amsterdam, (WO2 Onderzoek Uitgelicht).

  Research output: Working paper/discussion paper › Web article › Professional

  Open Access

• Er is nog steeds geen partikelwoordenboek, hoewel echter het partikelonderzoek niet stilligt.

  van der Wouden, T., 2020, In: Nederlandse Taalkunde. 25, 2-3, p. 241-254 14 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  File
  101 Downloads (Pure)

• Erk and MAPK signaling is essential for intestinal development through Wnt pathway modulation

  Wei, G., Gao, N., Chen, J., Fan, L., Zeng, Z., Gao, G., Li, L., Fang, G., Hu, K., Pang, X., Fan, H-Y., Clevers, H., Liu, M., Zhang, X. & Li, D., 02 Sep 2020, In: Development (Cambridge). 147, 17

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • proliferation
  • cell
  • life-span
  • activation
  • death

• Establishment and Culture of Human Intestinal Organoids Derived from Adult Stem Cells

  Pleguezuelos-Manzano, C., Puschhof, J., van den Brink, S., Geurts, V., Beumer, J. & Clevers, H., Sep 2020, In: Current protocols in immunology. 130, 1, p. e106

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Organoids
  • Adult Stem Cells
  • Conditioned Culture Medium
  • Small Intestine
  • Colon

• Establishment of human fetal hepatocyte organoids and CRISPR-Cas9-based gene knockin and knockout in organoid cultures from human liver

  Hendriks, D., Artegiani, B., Hu, H., Chuva de Sousa Lopes, S. & Clevers, H., 27 Nov 2020, In: Nature Protocols.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Hepatocytes
  • Organoids
  • Cell culture
  • Gene Knockout Techniques
  • Clustered Regularly Interspaced Short Palindromic Repeats

• Establishment of patient-derived cancer organoids for drug-screening applications

  Driehuis, E., Kretzschmar, K. & Clevers, H., Oct 2020, In: Nature Protocols. 15, 10, p. 3380-3409 30 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Organoids
  • Preclinical Drug Evaluations
  • Screening
  • Tissue
  • Epithelial Cells

• Estimating the Loss of Medieval Literature with an Unseen Species Model from Ecodiversity

  Kestemont, M. & Karsdorp, F. B., Oct 2020, Proceedings of the Workshop on Computational Humanities Research (CHR 2020). Karsdorp, F., McGillivray, B., Nerghes, A. & Wevers, M. (eds.). Vol. 2723 . p. 44-55 11 p.

  Research output: Chapter in book/volume › Contribution to conference proceedings › Scientific › peer-review

  Open Access

  • Medieval Literature
  • Species Problem
  • Middle Dutch
  • History of Books
  • Archival Records

• Etnisch etiket voor crimineel voedt onjuiste conclusies

  Lucassen, L., 18 Aug 2020, In: NRC Handelsblad.

  Research output: Contribution to journal/periodical › Article › Popularizing

  Open Access

• Eurocentrism in Research on Mass Violence

  Üngör, U., 2020, Eurocentrism in European History and Memory . Brolsma, M., de Bruin, R. & Lok, M. (eds.). Amsterdam: Amsterdam University Press, p. 65-77 (Eurocentrism in European history and memory).

  Research output: Chapter in book/volume › Chapter › Scientific › peer-review

• European research and innovation in a new geopolitical area

  Hessels, L., Tjong Tjin Tai, S-Y., Jansen, J. & Deuten, J., 19 May 2020, The Hague: Rathenau Instituut. 32 p.

  Research output: Book/Report › Report › Professional

  Open Access

• Europese wetenschap en innovatie in een nieuw geopolitiek speelveld

  Hessels, L., Tjong Tjin Tai, S-Y., Jansen, J. & Deuten, J., 14 Apr 2020, Den Haag: Rathenau Instituut. 33 p.

  Research output: Book/Report › Report › Professional

  Open Access

• Evaluation of Microsatellite Typing, ITS Sequencing, AFLP Fingerprinting, MALDI-TOF MS, and Fourier-Transform Infrared Spectroscopy Analysis of Candida auris

  Vatanshenassan, M., Boekhout, T., Mauder, N., Robert, V., Maier, T., Meis, J. F., Berman, J., Then, E., Kostrzewa, M. & Hagen, F., 25 Aug 2020, In: Journal of Fungi. 6, 3

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • matrix-assisted laser desorption-ionization mass spectrometry
  • Fourier Transform Infrared Spectroscopy
  • Candida
  • polymorphism
  • Microsatellite Repeats

• Evaluation of Molecular Epidemiology, Clinical Characteristics, Antifungal Susceptibility Profiles, and Molecular Mechanisms of Antifungal Resistance of Iranian Candida parapsilosis Species Complex Blood Isolates

  Arastehfar, A., Daneshnia, F., Najafzadeh, M. J., Hagen, F., Mahmoudi, S., Salehi, M., Zarrinfar, H., Namvar, Z., Zareshahrabadi, Z., Khodavaisy, S., Zomorodian, K., Pan, W., Theelen, B., Kostrzewa, M., Boekhout, T. & Lass-Flörl, C., 21 May 2020, In: Frontiers in cellular and infection microbiology. 10, p. 206

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Candida parapsilosis
  • Molecular Epidemiology
  • Echinocandins
  • Azoles
  • Fluconazole

• Even voorstellen: 'Oorlog uit Eerste Hand. Oorlogsbrieven (1935-1950) van het NIOD digitaal'

  Lange, van, M., Nispen, van, A. & Keijzer, C., 01 Jul 2020, NIOD Instituut voor Oorlogs-, Holocaust- en Genocidestudies, (NIOD blog).

  Research output: Working paper/discussion paper › Web article › Professional

  Open Access

• Evidence for distinct forms of compulsivity in the SAPAP3 mutant-mouse model for obsessive-compulsive disorder

  Ehmer, I., Crown, L., van Leeuwen, W., Feenstra, M., Willuhn, I. & Denys, D., 2020, In: eNeuro. 7, ENEURO.0245-19.2020.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  File

  • Obsessive-Compulsive Disorder
  • Grooming
  • Compulsive Behavior
  • Reward
  • Psychological Extinction
  105 Downloads (Pure)

• Evidence for ligninolytic activity of the ascomycete fungus Podospora anserina

  van Erven, G., Kleijn, A. F., Patyshakuliyeva, A., Di Falco, M., Tsang, A., de Vries, R. P., van Berkel, W. J. H. & Kabel, M. A., 16 Apr 2020, In: Biotechnology for Biofuels. 13

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Evolutionary Dynamics of the Spindle Assembly Checkpoint in Eukaryotes

  Kops, G. J. P. L., Snel, B. & Tromer, E. C., 18 May 2020, In: Current Biology. 30, 10, p. R589-R602

  Research output: Contribution to journal/periodical › Book/Film/Article review › Scientific

  • M Phase Cell Cycle Checkpoints
  • chromosome segregation
  • Eukaryota
  • eukaryotic cells
  • organisms

• Evolutionary histories of type III polyketide synthases in fungi

  Collemare, J., Feb 2020.

  Research output: Contribution to conference › Poster › Scientific

• Evolutionary Histories of Type III Polyketide Synthases in Fungi

  Collemare, J. & Navarro-Munoz, J. C., 21 Jan 2020, In: Frontiers in Microbiology.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Evolution of lifestyles in Capnodiales

  Abdollahzadeh, J., Groenewald, J. Z., Coetzee, M. P. A., Wingfield, M. J. & Crous, P. W., Mar 2020, In: Studies in Mycology. 95, p. 381-414 34 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Capnodiales
  • sooty molds
  • lifestyle
  • Fungi
  • Life Style

• Excursion pénible dans la terre cuite et les traces archéologiques haïtiens avec le docteur en archéologie

  Jean, J. S., 2020, In: Ayibopost.

  Research output: Contribution to journal/periodical › Article › Popularizing

• Exogenous application of plant hormones in the field alters aboveground plant–insect responses and belowground nutrient availability, but does not lead to differences in plant–soil feedbacks

  Heinen, R., Steinauer, K., De Long, J., Jongen, R., Biere, A., Harvey, J. A. & Bezemer, T. M., 2020, In: Arthropod-Plant Interactions. 14, p. 559-570

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  File

  • nutrient availability
  • hormone
  • plant hormones
  • salicylic acid
  • jasmonic acid
  192 Downloads (Pure)

• Experiences and lessons learned in publishing a large dataset: Detailed tables from the Population and Occupational Censuses 1947

  Jonker, J. K. & Poot, W., 30 Nov 2020, (Submitted) In: Research Data Journal for the Humanities and Social Sciences.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  File

  • census
  • digital image
  • statistics
  • analysis
  • material
  2 Downloads (Pure)

• Experimental light at night has a negative long-term impact on macro-moth populations

  van Grunsven, R. H. A., van Deijk, J. R., Donners, M., Berendse, F., Visser, M. E., Veenendaal, E. & Spoelstra, K., 22 Jun 2020, In: Current Biology. 30, 12, p. R694-R695

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

• Experimental vacancies do not induce settlement despite habitat saturation in a cooperative breeder

  Brouwer, L. & Cockburn, A., 11 Mar 2020, In: Biology Letters. 16

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  File
  37 Downloads (Pure)

• Explaining differences in retirement timing preferences between the solo self-employed and employees

  Zwier, D., Damman, M. & van den Heuvel, S. G., 11 Aug 2020, In: International Journal of Manpower. 19 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Employees
  • Retirement
  • Personnel
  • Job Characteristics
  • Self Employed Workers

• Exploiting chemical ecology to manage hyperparasitoids in biological control of arthropod pests

  Cusumano, A., Harvey, J. A., Bourne, M. E., Poelman, E. H. & de Boer, J. G., 2020, In: Pest Management Science. 76, 2, p. 432-443

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  File
  221 Downloads (Pure)

• Exploring fungal genomes for novel natural products

  Collemare, J., Feb 2020.

  Research output: Contribution to conference › Poster › Scientific

• Exploring How Cyanobacterial Traits Affect Nutrient Loading Thresholds in Shallow Lakes: A Modelling Approach

  Chang, M., Teurlincx, S., Janse, J. H., Paerl, H. W., Mooij, W. M. & Janssen, A. B. G., 2020, In: Water. 12, 9, 2467.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  File

  • pollution load
  • Nutrients
  • Lakes
  • lakes
  • bodies of water
  148 Downloads (Pure)

• Expression of Mutant Ubiquitin and Proteostasis Impairment in Kii Amyotrophic Lateral Sclerosis/Parkinsonism-Dementia Complex Brains

  Verheijen, B. M., Morimoto, S., Sasaki, R., Oyanagi, K., Kokubo, Y., Kuzuhara, S. & van Leeuwen, F. W., 2020, In: Journal of Neuropathology and Experimental Neurology. 79, p. 902-907

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  File

  • Proteostasis
  • Parkinsonian Disorders
  • Amyotrophic Lateral Sclerosis
  • Ubiquitin
  • Dementia
  68 Downloads (Pure)

• Extensive Evaluation Report UNFPA-NIDI Resource Flows Project on Family Planning

  Vrijburg, K. L., Dhatemwa, M., Hernández-Peña, P. & Murillo, M. G., Dec 2020

  Research output: Book/Report › Report › Professional

• Extraterritorial forays by great tits are associated with dawn song in unexpected ways

  Bircher, N., van Oers, K., Hinde, C. A. & Naguib, M., 2020, In: Behavioral Ecology. 31, 4, p. 873-883

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  File

  • song
  • plumage
  • advertisement
  • mating success
  • paternity
  37 Downloads (Pure)