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Author

  • (Riks) H.J. Laanbroek
2020
2019

A Physiological and Genomic Comparison of Nitrosomonas Cluster 6a and 7 Ammonia-Oxidizing Bacteria

Sedlacek, C. J., McGowan, B., Suwa, Y., Sayavedra-Soto, L., Laanbroek, H. J., Stein, L. Y., Norton, J. M., Klotz, M. G. & Bollmann, A., Nov 2019, In : Microbial Ecology. 78, 4, p. 985-994

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Saturated N2O emission rates occur above the nitrogen deposition level predicted for the semi-arid grasslands of Inner Mongolia, China

Gu, X., Wang, Y., Laanbroek, H. J., Xu, X., Song, B., Huo, Y., Chen, S., Li, L. & Zhang, L., 2019, In : Geoderma. 341, p. 18-25 8 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

2018

Effects of Rhizophora mangle leaf litter and seedlings on carbon and nitrogen cycling in salt marshes - potential consequences of climate-induced mangrove migration

Laanbroek, H. J., Zhang, Q., Leite, M. F. A., Verhoeven, J. T. A. & Whigham, D. F., 2018, In : Plant and Soil. 426, May 2018, p. 383-400

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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122 Downloads (Pure)

Numerical relationships between archaeal and bacterial amoA genes vary by Icelandic Andosol classes

Laanbroek, H. J., Veenhuizen, P. T. M., Keijzer, R. M. & Hefting, M. M., 2018, In : Microbial Ecology. 75, 1, p. 204-215

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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144 Downloads (Pure)

The distribution of sediment and water column nitrification potential in the hyper-turbid Ems estuary

Sanders, T. & Laanbroek, H. J., 01 Jul 2018, In : Aquatic Sciences. 80, 4, p. 33 1 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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128 Downloads (Pure)

The effects of condensed tannins derived from senescing Rhizophora mangle leaves on carbon, nitrogen and phosphorus mineralization in a Distichlis spicata salt marsh soil

Zhang, Q. & Laanbroek, H. J., 2018, In : Plant and Soil. 433, 1-2, p. 37-53

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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255 Downloads (Pure)

Tide as steering factor in structuring archaeal and bacterial ammonia-oxidizing communities in mangrove forest soils dominated by Avicennia germinans and Rhizophora mangle

Marcos, M. S., Barboza, A. D. H., Keijzer, R. M. & Laanbroek, H. J., 2018, In : Microbial Ecology. 75, 4, p. 997-1008

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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246 Downloads (Pure)
2017

Soil warming and fertilization altered rates of nitrogen transformation processes and selected for adapted ammonia-oxidizing archaea in sub-arctic grassland soil

Daebeler, A., Bodelier, P. L. E., Hefting, M. M., Rütting, T. & Laanbroek, H. J., Apr 2017, In : Soil Biology & Biochemistry. 107, p. 114-124

Research output: Contribution to journal/periodicalArticleScientificpeer-review

3 Downloads (Pure)
2016

Complete genome of Nitrosospira briensis C-128, an ammonia-oxidizing bacterium from agricultural soil

Rice, M. C., Norton, J. M., Valois, F., Bollmann, A., Bottomley, P. J., Klotz, M. G., Laanbroek, H. J., Suwa, Y., Stein, L. Y., Sayavedra-Soto, L., Woyke, T., Shapiro, N., Goodwin, L. A., Huntemann, M., Clum, A., Pillay, M., Kyrpides, N., Varghese, N., Mikhailova, N., Markowitz, V. & 6 others, Palaniappan, K., Ivanova, N., Stamatis, D., Reddy, T. B. K., Ngan, C. Y. & Daum, C., 2016, In : Standards in Genomic Sciences. 11, 1, p. 46

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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219 Downloads (Pure)

Nitrous oxide emission related to ammonia-oxidizing bacteria and mitigation options from N fertilization in a tropical soil

Soares, J. R., Cassman, N., Kielak, A. M., Pijl, A. S., do Carmo, J. B., Lourenço, K. S., Laanbroek, H. J., Cantarella, H. & Kuramae, E. E., 2016, In : Scientific Reports. 6, 30349.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
291 Downloads (Pure)

Potential of sulfate reduction in mangrove forest soils: Comparison between two dominant species of the Americas

Balk, M., Keuskamp, J. & Laanbroek, H. J., 2016, In : Frontiers in Microbiology. in press, 2016.01855.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
195 Downloads (Pure)

The effect of bacterial community members on the proteome of the ammonia-oxidizing bacterium Nitrosomonas sp. Is79

Sedlacek, C. J., Nielsen, S., Greis, K. D., Haffey, W. D., Revsbech, N. P., Ticak, T., Laanbroek, H. J. & Bollmann, A., 2016, In : Applied and Environmental Microbiology. 82, 15, p. 4776-4788

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
229 Downloads (Pure)
2015

Ammonia-limited conditions cause of Thaumarchaeal dominance in volcanic grassland soil

Daebeler, A., Bodelier, P. L. E., Hefting, M. M. & Laanbroek, H. J., 2015, In : FEMS Microbiology Ecology. 91, 3, fiv014.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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229 Downloads (Pure)

Effects of Mowing Heights on N2O Emission from Temperate Grasslands in Inner Mongolia, Northern China

Zhang, L., Hou, L., Laanbroek, H. J., Guo, D. & Wang, Q., 01 Jan 2015, In : American Journal of Climate Change. 04, 05, p. 397-407

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
86 Downloads (Pure)

Nitrate ammonification in mangrove soils: A hidden source of nitrite?

Balk, M., Laverman, A. M., Keuskamp, J. A. & Laanbroek, H. J., 2015, In : Frontiers in Microbiology. 6, 166.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
335 Downloads (Pure)

Phylogenetic characterization of phosphatase-expressing bacterial communities in Baltic Sea sediments

Steenbergh, A., Bodelier, P., Hoogveld, H. L., Slomp, C. P. & Laanbroek, H. J., 2015, In : Microbes and Environments. 30, 2, p. 192-195 ME14074.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
130 Downloads (Pure)

Potential activity, size and structure of sulfate-reducing microbial communities in an exposed, grazed and a sheltered, non-grazed mangrove stands at the Red Sea coast

Balk, M., Keuskamp, J. A. & Laanbroek, H. J., 2015, In : Frontiers in Microbiology. 6, 01478.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
240 Downloads (Pure)

Shifts in the pelagic ammonia-oxidizing microbial communities along the eutrophic estuary of Yong River in Ningbo City, China

Zhang, Q., Tang, F-Y., Zhou, Y-J., Xu, J., Chen, H., Wang, M-J. & Laanbroek, H. J., 2015, In : Frontiers in Microbiology. 6, 14 p., 1180.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
202 Downloads (Pure)

Short- and long-term effects of nutrient enrichment on microbial exoenzyme activity in mangrove peat

Keuskamp, J. A., Feller, I. C., Laanbroek, H. J., Verhoeven, J. T. A. & Hefting, M. M., 2015, In : Soil Biology & Biochemistry. 81, 0, p. 38-47 10 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
218 Downloads (Pure)

The effect of human settlement on the abundance and community structure of ammonia oxidizers in tropical stream sediments

Reis, M. D. P., Ávila, M., Keijzer, R. M., Barbosa, F. A. R., Chartone-Souza, E., Nascimento, A. & Laanbroek, R. H. J., 2015, In : Frontiers in Microbiology. 6, 00898 .

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
171 Downloads (Pure)
2014

Effect of redox conditions on bacterial community structure in Baltic Sea sediments with contrasting redox conditions

Steenbergh, A. K., Bodelier, P. L. E., Slomp, C. P. & Laanbroek, H. J., 2014, In : PLoS One. 9, 3, e92401.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
260 Downloads (Pure)

Effects of increased summer flooding on nitrogen dynamics in impounded mangroves

Verhoeven, J. T. A., Laanbroek, H. J., Rains, M. & Whigham, D. F., 2014, In : Journal of Environmental Management. 139, p. 217-226

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Interactions between Thaumarchaea, Nitrospira and methanotrophs modulate autotrophic nitrification in volcanic grassland soil

Daebeler, A., Bodelier, P. L. E., Yan, Z., Hefting, M. M., Jia, Z. & Laanbroek, H. J., 2014, In : ISME Journal. 8, p. 2397-2410

Research output: Contribution to journal/periodicalArticleScientificpeer-review

2 Downloads (Pure)

The influence of human settlement on the distribution and diversity of iron-oxidizing bacteria belonging to the Gallionellaceae in tropical streams

Reis, M. P., Avila, M. P., Costa, P. S., Barbosa, F. A. R., Laanbroek, H. J., Chartone-Souza, E. & Nascimento, A. M. A., 2014, In : Frontiers in Microbiology. 5, 630.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
206 Downloads (Pure)
2013
Open Access
File
283 Downloads (Pure)

Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations

Bollmann, A., Sedlacek, C. J., Norton, J., Laanbroek, H. J., Suwa, Y., Stein, L. Y., Klotz, M. G., Arp, D., Sayavedra-Soto, L., Lu, M., Bruce, D., Detter, C., Tapia, R., Han, J., Woyke, T., Lucas, S., Pitluck, S., Pennacchio, L., Nolan, M., Land, M. L. & 15 others, Huntemann, M., Deshpande, S., Han, C., Chen, A., Kyrpides, N., Mavromatis, K., Markowitz, V., Szeto, E., Ivanova, N., Mikhailova, N., Pagani, I., Pati, A., Peters, L., Ovchinnikova, G. & Goodwin, L., 2013, In : Standards in Genomic Sciences. 7, 3, p. 469-482

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
104 Downloads (Pure)

Does microbial stoichiometry modulate eutrophication of aquatic ecosystems?

Steenbergh, A. K., Bodelier, P. L. E., Heldal, M., Slomp, C. P. & Laanbroek, H. J., 2013, In : Environmental Microbiology. 15, 5, p. 1572-1579

Research output: Contribution to journal/periodicalArticleScientificpeer-review

3 Downloads (Pure)

Effect of the aerenchymatous helophyte Glyceria maxima on the sulfate-reducing communities in two contrasting riparian grassland soils

Miletto, M., Bodelier, P. L. E., Ferdelman, F. G., Jørgensen, B. B. & Laanbroek, H. J., 2013, In : Plant and Soil. 370, 1-2, p. 73-87

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
399 Downloads (Pure)

Nutrient amendment does not increase mineralisation of sequestered carbon during incubation of a nitrogen-limited mangrove soil

Keuskamp, J. A., Schmitt, A., Laanbroek, H. J., Verhoeven, J. T. A. & Hefting, M. M., 2013, In : Soil Biology & Biochemistry. 57, p. 822-829

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
575 Downloads (Pure)

Seasonal and vertical distribution of putative ammonia-oxidizing thaumarchaeotal communities in an oligotrophic lake

Vissers, E. W., Blaga, C. I., Bodelier, P. L. E., Muyzer, G., Schleper, C., Sinninghe Damsté, J. S., Tourna, M. & Laanbroek, H. J., 2013, In : FEMS Microbiology Ecology. 83, 2, p. 515-526

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
321 Downloads (Pure)

Temporal and spatial coexistence of archaeal and bacterial amoA genes and gene transcripts in Lake Lucerne

Vissers, E. W., Anselmetti, F. S., Bodelier, P. L. E., Muyzer, G., Schleper, C., Tourna, M. & Laanbroek, H. J., 2013, In : Archaea. 2013, p. 289478

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
457 Downloads (Pure)
2012

Archaeal dominated ammonia-oxidizing communities in Icelandic grassland soils are moderately affected by long-term N fertilization and geothermal heating

Daebeler, A., Abell, G. C. J., Bodelier, P. L. E., Bodrossy, L., Frampton, D. M., Hefting, M. M. & Laanbroek, H. J., 2012, In : Frontiers in Microbiology. 3, 14 p., 00352.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
383 Downloads (Pure)

Spatial patterns of iron- and methane-oxidizing bacterial communities in an irregularly flooded, riparian wetland

Wang, J., Krause, S., Muyzer, G., Meima-Franke, M., Laanbroek, H. J. & Bodelier, P. L. E., 2012, In : Frontiers in Microbiology. 3, 64.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
393 Downloads (Pure)

The distribution of ammonia-oxidizing betaproteobacteria in stands of Black mangroves (Avicennia germinans)

Laanbroek, H. J., Keijzer, R. M., Verhoeven, J. T. A. & Whigham, D. F., 2012, In : Frontiers in Microbiology. 3, 153

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
432 Downloads (Pure)
2011

Distribution and diversity of gallionella-like neutrophilic iron oxidizers in a tidal freshwater marsh

Wang, J., Vollrath, S., Behrends, T., Bodelier, P. L. E., Muyzer, G., Den Oudsten, F., Meima-Franke, M., Cappellen, P. & Laanbroek, H. J., 2011, In : Applied and Environmental Microbiology. 77, 7, p. 2337-2344

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
297 Downloads (Pure)

Effect of drought on the community composition of ammonia-oxidizing betaproteobacteria in impounded mangroves

Laanbroek, H. J., Keijzer, R. M., Verhoeven, J. T. A. & Whigham, D. F., 2011.

Research output: Contribution to conferencePaperScientific

Genome sequence of Nitrosomonas sp. AL212, an ammonia-oxidizing bacterium sensitive to high-levels of ammonia

Yuichi, S., Norton, J. M., Bollmann, A., Klotz, M. G., Stein, L. Y., Laanbroek, H. J., Arp, D. J., Goodwin, L. A., Chertkov, O., Held, B., Bruce, D., Detter, J. C., Detter, J. C., Tapia, R. & Han, C. S., 2011, In : Journal of Bacteriology. 193, 18, p. 5047-5048

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
137 Downloads (Pure)

Genome sequencing of Nitrosomonas sp. AL212, an ammonia‐oxidizing bacterium adapted for growth at low ammonia concentrations

Norton, J., Suwa, Y., Bollmann, A., Klotz, M. G., Stein, L. Y., Laanbroek, H. J., Arp, D. & Goodwin, L., 2011.

Research output: Contribution to conferencePaperScientific

Isolation, cultivation, and characterization of ammonia-oxidizing bacteria and archaea adapted to low ammonium concentrations

Bollmann, A., French, A. & Laanbroek, H. J., 2011, In : Methods in Enzymology. 486, p. 55-88 29 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

6 Downloads (Pure)

Nitrification in inland waters

Laanbroek, H. J. & Bollmann, A., 2011, Nitrification. B. Ward, B., J. Arp, D. & G. Klotz, M. (eds.). American Society for Microbiology, p. 385-403

Research output: Chapter in book/volumeChapterScientific

Nutrient limitation of Avicennia marina near Its northern limit in the Red Sea, Saudi Arabia

Whigham, D. F., Feller, I. C., Batang, Z., Alikunhi, A., Verhoeven, J. T. A., Laanbroek, H. J., Keuskamp, J. A., Hefting, M. M. & Balk, M., 2011.

Research output: Contribution to conferencePaperScientific

Phosphatases relieve carbon limitation of microbial activity in Baltic Sea sediments along a redox-gradient

Steenbergh, A. K., Bodelier, P. L. E., Hoogveld, H. L., Slomp, C. P. & Laanbroek, H. J., 2011, In : Limnology and Oceanography. 56, 6, p. 2018-2026

Research output: Contribution to journal/periodicalArticleScientificpeer-review

1 Downloads (Pure)