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Author

  • Wietse de Boer
2020

Decomposition of mixtures of cover crop residues increases microbial functional diversity

Drost, S. M., Rutgers, M., Wouterse, M., De Boer, W. & Bodelier, P., 2020, In : Geoderma. 361, 114060.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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49 Downloads (Pure)

DiSCount: computer vision for automated quantification of Striga seed germination

Masteling, R., Voorhoeve, L., Ijsselmuiden, J., Dini-Andreote, F., De Boer, W. & Raaijmakers, J. M., 01 May 2020, In : Plant Methods. 16, 60

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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36 Downloads (Pure)

Effect of nitrogen on fungal growth efficiency

Di Lonardo, D. P., van der Wal, A., Harkes, P. & de Boer, W., 2020, In : Plant Biosystems.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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61 Downloads (Pure)

The hidden potential of saprotrophic fungi in arable soil: patterns of short-term stimulation by organic amendments

Clocchiatti, A., Hannula, E., Van den Berg, M., Korthals, G. & De Boer, W., 2020, In : Applied Soil Ecology. 147, 103434.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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114 Downloads (Pure)

Volatile-mediated antagonism of soil bacterial communities against fungi

Li, X. G., Garbeva, P., Liu, X., Klein Gunnewiek, P. J. A., Clocchiatti, A., Hundscheid, M. P. J., Wang, X. & De Boer, W., 2020, In : Environmental Microbiology. 22, 3, p. 1025-1035

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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88 Downloads (Pure)
2019

Biological activities associated with the volatile compound 2,5-bis(1-methylethyl)-pyrazine

Janssens, T. K. S., Tyc, O., Besselink, H., De Boer, W. & Garbeva, P. V., 2019, In : FEMS Microbiology Letters. fnz023.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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165 Downloads (Pure)

Editorial: special issue on the ecology of soil microorganisms

Pennanen, T., Fritze, H., de Boer, W. & Baldrian, P., Dec 2019, In : FEMS Microbiology Ecology. 95, 12, fiz154.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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82 Downloads (Pure)

Effect of the amount of organic trigger compounds, nitrogen and soil microbial biomass on the magnitude of priming of soil organic matter

Di Lonardo, P., De Boer, W., Zweers, A. J. & Van der Wal, A., 2019, In : PLoS One. 15, 5, 0216730.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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85 Downloads (Pure)

Harnessing the microbiome to control plant parasitic weeds

Masteling, R., Lombard, L., De Boer, W., Raaijmakers, J. M. & Dini-Andreote, F., 2019, In : Current Opinion in Microbiology. 49, June, p. 26-33

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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96 Downloads (Pure)

Legacy of land use history determines reprogramming of plant physiology by soil microbiome

Li, X. G., Jousset, A., De Boer, W., Carriön, V. J., Zhang, T., Wang, X. & Kuramae, E. E., 2019, In : ISME Journal. 13, p. 738-751

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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462 Downloads (Pure)

Pathogen suppression by microbial volatile organic compounds in soils

De Boer, W., Li, X. G., Meisner, A. & Garbeva, P. V., 2019, In : FEMS Microbiology Ecology. 95, 8, fiz105.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

4 Downloads (Pure)

Plant presence reduces root and shoot litter decomposition rates of crops and wild relatives

Barel, J. M., Kuyper, T. W., de Boer, W. & De Deyn, G. B., 2019, In : Plant and Soil. 438, 1, p. 313-327 15 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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53 Downloads (Pure)

Unexpected role of canonical aerobic methanotrophs in upland agricultural soils.

Ho, A., Lee, H. J., Reumer, M. R., Meima-Franke, M., Raaijmakers, C. E., Zweers, A. J., De Boer, W., van der Putten, W. H. & Bodelier, P. L. E., 2019, In : Soil Biology & Biochemistry. 131, April, 1-8.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Winter cover crop legacy effects on litter decomposition act through litter quality and microbial community changes

Barel, J. M., Kuyper, T. W., Paul, J., de Boer, W., Cornelissen, J. H. C. & De Deyn, G. B., 01 Jan 2019, In : Journal of Applied Ecology. 56, 1, p. 132-143 12 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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88 Downloads (Pure)
2018

Calling from distance: Attraction of soil bacteria by plant root volatiles

Schulz-Bohm, K., Gerards, S., Hundscheid, M. P. J., Melenhorst, J., De Boer, W. & Garbeva, P. V., 2018, In : ISME Journal. 12

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
4 Downloads (Pure)

Legacy effects of diversity in space and time driven by winter cover crop biomass and nitrogen concentration

Barel, J. M., Kuyper, T. W., de Boer, W., Douma, J. C. & De Deyn, G. B., 2018, In : Journal of Applied Ecology. 55, 1, p. 299-310 12 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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106 Downloads (Pure)

Relationship between home-field advantage of litter decomposition and priming of soil organic matter

Di Lonardo, P., Manrubia, M., De Boer, W., Zweers, A. J., Veen, G. F. & Van der Wal, A., 2018, In : Soil Biology & Biochemistry. 126, p. 49-56

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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28 Downloads (Pure)

Strategies to maintain natural biocontrol of soil-borne crop diseases during severe drought and rainfall events

Meisner, A. & De Boer, W., 2018, In : Frontiers in Microbiology. 9, 02279.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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129 Downloads (Pure)

Suppression of soil-borne Fusarium pathogens of peanut by intercropping with the medicinal herb Atractylodes lancea

Li, X., De Boer, W., Zhang, Y., Ding, C., Zhang, T. & Wang, X., 2018, In : Soil Biology & Biochemistry. 116, p. 120 - 130

Research output: Contribution to journal/periodicalArticleScientificpeer-review

6 Downloads (Pure)

Volatile-mediated suppression of plant pathogens is related to soil properties and microbial community composition

Van Agtmaal, M., Straathof, A. L., Termorshuizen, A. J., Lievens, B., Hoffland, E. & De Boer, W., 2018, In : Soil Biology & Biochemistry. p. 164-174

Research output: Contribution to journal/periodicalArticleScientificpeer-review

4 Downloads (Pure)
2017

Changing soil legacies to direct restoration of plant communities

Brinkman, E. P., Raaijmakers, C. E., De Boer, W. & van der Putten, W. H., 2017, In : AoB PLANTS. in press, plx038.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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349 Downloads (Pure)

Dinner in the dark: Illuminating drivers of soil organic matter decomposition

van der Wal, A. & De Boer, W., Feb 2017, In : Soil Biology & Biochemistry. 105, p. 45-48 4 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

28 Downloads (Pure)

Effects of bio-based residue amendments on greenhouse gas emission from agricultural soil are stronger than effects of soil type with different microbial community composition.

Ho, A., Ijaz, U. Z., Janssens, T., Ruijs, R., Kim, S. Y., De Boer, W., Termorshuizen, A. J., van der Putten, W. H. & Bodelier, P. L. E., 2017, In : Global Change Biology Bioenergy. 9, 12, p. 1707-1720

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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392 Downloads (Pure)

Exploring bacterial interspecific interactions for discovery of novel antimicrobial compounds

Tyc, O., de Jager, V. C. L., Van den Berg, M., Gerards, S., Janssens, T., Zaagman, N., Kai, M., Svatos, A., Zweers, A. J., Hordijk, C. A., Besselink, H., De Boer, W. & Garbeva, P. V., 2017, In : Microbial Biotechnology. 10, 4, p. 910-925

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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285 Downloads (Pure)

Exploring the reservoir of potential fungal plant pathogens in agricultural soil

Van Agtmaal, M., Straathof, A. L., Termorshuizen, A. J., Teurlincx, S., Hundscheid, M. P. J., Ruyters, S., Busschaert, P., Lievens, B. & De Boer, W., 2017, In : Applied Soil Ecology. 121, p. 152-160

Research output: Contribution to journal/periodicalArticleScientificpeer-review

2 Downloads (Pure)

Fungal diversity and potential tree pathogens in decaying logs and stumps

Van der Wal, A., Klein Gunnewiek, P. J. A., De Hollander, M. & De Boer, W., 2017, In : Forest Ecology and Management. 406, p. 266-273

Research output: Contribution to journal/periodicalArticleScientificpeer-review

2 Downloads (Pure)

Fungal volatile compounds induce production of the secondary metabolite Sodorifen in Serratia plymuthica PRI-2C

Schmidt, R. L., de Jager, V. C. L., Zühlke, D., Wolff, C., Bernhardt, J., Cankar, K., Beekwilder, J., van Ijcken, W., Sleutels, F., De Boer, W., Riedel, K. & Garbeva, P. V., 2017, In : Scientific Reports. 7, 862 .

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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424 Downloads (Pure)

Fungus-associated bacteriome in charge of their host behaviour

Schulz-Bohm, K., Tyc, O., De Boer, W., Peereboom, N., Debets, F., Zaagman, N., Janssens, T. K. S. & Garbeva, P., 2017, In : Fungal Genetics and Biology. 102, p. 38-48

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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278 Downloads (Pure)

Low abundant soil bacteria can be metabolically versatile and fast growing

Kurm, V., van der Putten, W. H., De Boer, W., Naus-Wiezer, S. M. H. & Hol, W. H. G., 2017, In : Ecology. 98, 2, p. 555-564

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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224 Downloads (Pure)

Priming of soil organic matter: Chemical structure of added compounds is more important than the energy content

Di Lonardo, P., De Boer, W., Klein Gunnewiek, P. J. A., Hannula, S. E. & Van der Wal, A., May 2017, In : Soil Biology & Biochemistry. 108, p. 41-54 14 p.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

9 Downloads (Pure)

Priorities for research in soil ecology

Eisenhauer, N., Antunes, P. M., Bennett, A. E., Birkhofer, K., Bissett, A., Bowker, M. A., Caruso, T., Chen, B., Coleman, D. C., De Boer, W., De Ruiter, P. C., DeLuca, T. H., Frati, F., Griffiths, B. S., Hart, M. M., Hättenschwiler, S., Haimi, J., Heethoff, M., Kaneko, N., Kelly, L. C. & 12 others, Leinaas, H. P., Lindo, Z., Macdonald, C., Rillig, M. C., Rillig, M. C., Scheu, S., Schmidt, O., Seastedt, T. R., Straalen, N. M. V., Tiunov, A. V., Zimmer, M. & Powell, J. R., Jul 2017, In : Pedobiologia. 63, Supplement C, p. 1 - 7

Research output: Contribution to journal/periodicalArticleScientificpeer-review

1 Downloads (Pure)
Open Access
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273 Downloads (Pure)

Soil networks become more connected and take up more carbon as nature restoration progresses

Morriën, E., Hannula, S. E., Snoek, B., Helmsing, N. R., Zweers, H., De Hollander, M., Lujan Soto, R., Bouffaud, M. L., Buée, M., Dimmers, W., Duyts, H., Geisen, S., Girlanda, M., Griffiths, R. I., Jørgensen, H-B., Jensen, J., Plassart, P., Redecker, D., Schmelz, R. M., Schmidt, O. & 12 others, Thomson, B. C., Tisserant, E., Uroz, S., Winding, A., Bailey, M. J., Bonkowski, M., Faber, J. H., Martin, F., Lemanceau, P., De Boer, W., van Veen, H. & van der Putten, W. H., 2017, In : Nature Communications. 8, 14349.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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245 Downloads (Pure)

Soil-wood interactions: influence of decaying coniferous and broadleaf logs on composition of soil fungal communities

Van der Wal, A., Klein Gunnewiek, P. J. A. & De Boer, W., 2017, In : Fungal Ecology. 30, December, p. 132-134

Research output: Contribution to journal/periodicalArticleScientificpeer-review

1 Downloads (Pure)

The prey’s scent – volatile organic compound mediated interactions between soil bacteria and their protist predators

Schulz-Bohm, K., Geisen, S., Wubs, E. R. J., Song, C., De Boer, W. & Garbeva, P. V., 2017, In : ISME Journal. 11, p. 817-820

Research output: Contribution to journal/periodicalArticleScientificpeer-review

31 Downloads (Pure)

Upscaling of fungal-bacterial interactions: from the lab to the field

De Boer, W., 2017, In : Current Opinion in Microbiology. 37, p. 35-41

Research output: Contribution to journal/periodicalArticleScientificpeer-review

6 Downloads (Pure)
2016

Controlling the microbiome: microhabitat adjustments for successful biocontrol strategies in soil and human gut: Opinion article

Adam, E., Groenenboom, A. E., Kurm, V. K., Rajewska, M., Schmidt, R. L., Tyc, O., Weidner, S., Berg, G., De Boer, W. & Salles, J., 2016, In : Frontiers in Microbiology. in press, 1079.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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127 Downloads (Pure)

De weerbare bodem

De Boer, W., 2016, Leve(n)de bodem: de basis onder ons bestaan. Brussaard, L., Govers, F. & Buiter, R. (eds.). Stichting Biowetenschappen en Maatschappij, Vol. 3. p. 36-42 (Cahiers Biowetenschappen en Maatschappij).

Research output: Chapter in book/volumeChapterPopularizing

Open Access
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52 Downloads (Pure)

Genomic comparison of chitinolytic enzyme systems from terrestrial and aquatic bacteria

Bai, Y., Eijsink, V. G. H., Kielak, A. M., Van Veen, J. A. & De Boer, W., 2016, In : Environmental Microbiology. 18, 1, p. 38-49

Research output: Contribution to journal/periodicalArticleScientificpeer-review

12 Downloads (Pure)

Microbial small talk: volatiles in fungal-bacterial interactions

Schmidt, R., Etalo, D. N., de Jager, V. C. L., Gerards, S., Zweers, H., De Boer, W. & Garbeva, P. V., 2016, In : Frontiers in Microbiology. 6, 01495.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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294 Downloads (Pure)

Patterns of natural fungal community assembly during initial decay of coniferous and broadleaf tree logs

Van der Wal, A., Klein Gunnewiek, P. J. A., Cornelissen, J. H. C., Crowther, T. W. & De Boer, W., 2016, In : Ecosphere. 7, 7, 1393.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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428 Downloads (Pure)

Specific impacts of beech and Norway spruce on the structure and diversity of the rhizosphere and soil microbial communities

Uroz, S., Oger, P., Tisserand, E., Cebron, A., Turpault, M. -P., Buee, M., De Boer, W., Leveau, J. H. J. & Frey-Klett, P., 15 Jun 2016, In : Scientific Reports. 6

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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237 Downloads (Pure)

The sapro-rhizosphere: Carbon flow from saprotrophic fungi into fungus-feeding bacteria

Ballhausen, M-B. & De Boer, W., 2016, In : Soil Biology & Biochemistry. 102, November, p. 14-17

Research output: Contribution to journal/periodicalArticleScientificpeer-review

16 Downloads (Pure)

Trait differentiation within the fungus-feeding (mycophagous) bacterial genus Collimonas

Ballhausen, M-B., Vandamme, P. & De Boer, W., 16 Jun 2016, In : PLoS One. 11, 6, e0157552.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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184 Downloads (Pure)
2015

A fragrant neighborhood: Volatile mediated bacterial interactions in soil

Schulz-Bohm, K., Zweers, H., De Boer, W. & Garbeva, P., 2015, In : Frontiers in Microbiology. 6, 01212.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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261 Downloads (Pure)

Antifungal rhizosphere bacteria can increase as response to the presence of saprotrophic fungi

De Boer, W., Hundscheid, M. P. J., Klein Gunnewiek, P. J. A., De Ridder-Duine, A. S., Thion, C., van Veen, J. A. & Van der Wal, A., 2015, In : PLoS One. 10, 9, e0137988.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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291 Downloads (Pure)

Baiting of bacteria with hyphae of common soil fungi revealed a diverse group of potentially mycophagous secondary consumers in the rhizosphere

Rudnick, M. B., van Veen, J. A. & de Boer, W., 2015, In : Soil Biology & Biochemistry. 88, September, p. 73-82

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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130 Downloads (Pure)

Context dependency and saturating effects of loss of rare soil microbes on plant productivity

Hol, G., De Boer, W., de Hollander, M., Kuramae, E. E., Meisner, A. & van der Putten, W., 2015, In : Frontiers in Plant Science. 6, 485.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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247 Downloads (Pure)

Early colonizers of unoccupied habitats represent a minority of the soil bacterial community

Wolf, A. B., Rudnick, M. B., De Boer, W. & Kowalchuk, G. A., 2015, In : FEMS Microbiology Ecology. 91, 5, fiv024.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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190 Downloads (Pure)

Exploring the genomic traits of fungus-feeding bacterial genus Collimonas

Song, C., Schmidt, R. L., de Jager, V. C. L., Krzyzanowska, D., Jongedijk, E., Cankar, K., Beekwilder, J., van Veen, A., De Boer, W., van Veen, J. A. & Garbeva, P. V., 2015, In : BMC Genomics. 16, 1103.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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234 Downloads (Pure)