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Author

  • Paul Bodelier
2020

Can flooding-induced greenhouse gas emissions be mitigated by trait-based plant species choice?

Orama, N. J., van Groeningen, J. W., Bodelier, P., Brenzinger, K., Cornelissen, J. H. C., De Deyn, G. & Abalos, D., 2020, In : Science of the Total Environment. 727, 20 July, 138476.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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33 Downloads (Pure)

Co-occurrence patterns among prokaryotes across an age gradient in pit mud of Chinese strong-flavor liquor

Zheng, Y., Hu, X., Jia, Z., Bodelier, P., Guo, Z., Zhang, Y., Li, F., Li, X. & He, P., 2020, In : Canadian Journal of Microbiology. Online

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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83 Downloads (Pure)

Decomposition of mixtures of cover crop residues increases microbial functional diversity

Drost, S. M., Rutgers, M., Wouterse, M., De Boer, W. & Bodelier, P., 2020, In : Geoderma. 361, 114060.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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48 Downloads (Pure)

DNA stable-isotope probing highlights the effects of temperature on functionally active methanotrophs in natural wetlands

Zhang, L., Dumont, M. G., Bodelier, P. L. E., Adams, J. M., He, D. & Chu, H., 2020, In : Soil Biology & Biochemistry. 149, 107954.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Grand challenges in Terrestrial Microbiology: moving on from a decade of progress in microbial biogeochemistry: SPECIALTY GRAND CHALLENGE ARTICLE

Bodelier, P. & Hallin, S., 2020, In : Frontiers in Microbiology. 11, 981.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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21 Downloads (Pure)

Niche Differentiation of Host-associated Pelagic Microbes and Their Potential Contribution to Biogeochemical Cycling in Artificially Warmed Lakes

Samad, M. S., Lee, H. J., Cerbin, S., Meima-Franke, M. & Bodelier, P., 2020, In : Frontiers in Microbiology. 11

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access

Response of a methane-driven interaction network to stressor intensification

Ho, A., Mendes, L. W., Lee, H. J., Kaupper, T., Mo, Y., Poehlein, A., Bodelier, P., Jia, Z. & Horn, M. A., 2020, In : FEMS Microbiology Ecology. 96, 10, fiaa180.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

2019

Ethyl tert-butyl ether (EtBE) degradation by an algal-bacterial culture obtained from contaminated groundwater

van der Waals, M., Plugge, C. M., Meima-Franke, M., de Waard, P., Bodelier, P. L. E., Smidt, H. & Gerritse, J., 2019, In : Water Research. 148, January, p. 314-323

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Methanotroph Ecology, Environmental distribution and functioning.

Bodelier, P. L. E., Pérez, G., Veraart, A. J. & Krause, S., 2019, Methanotrophs: Microbiology Fundamentals and Biotechnological Applications. Lee, E. Y. (ed.). Heidelberg: Springer, (Microbiology Monographs MICROMONO; vol. 32).

Research output: Chapter in book/volumeChapterScientificpeer-review

3 Downloads (Pure)

Methylotetracoccus oryzae Strain C50C1 Is a Novel Type Ib Gammaproteobacterial Methanotroph Adapted to Freshwater Environments

Ghashghavi, M., Belova, S., Bodelier, P. L. E., Dedysh, S., Kox, M. A. R., Speth, D., Frenzel, P., Jetten, M., Lücker, S. & Lüke, C., 2019, In : mSphere. 4, e00631-18.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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85 Downloads (Pure)

Rice straw serves as additional carbon source for rhizosphere microorganisms and reduces root exudate consumption

Maarastawi, S. A., Frindte, K., Bodelier, P. L. E. & Knief, C., 2019, In : Soil Biology & Biochemistry. 135, August, p. 235-238

Research output: Contribution to journal/periodicalArticleScientificpeer-review

1 Downloads (Pure)

Unexpected role of canonical aerobic methanotrophs in upland agricultural soils.

Ho, A., Lee, H. J., Reumer, M. R., Meima-Franke, M., Raaijmakers, C. E., Zweers, A. J., De Boer, W., van der Putten, W. H. & Bodelier, P. L. E., 2019, In : Soil Biology & Biochemistry. 131, April, 1-8.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

2018

Abundance and δ13C values of fatty acids in lacustrine surface sediments: Relationships with in-lake methane concentrations

Stötter, T., Bastviken, D., Bodelier, P. L. E., Hardenbroek, M. V., Rinta, P., Schilder, J., Schubert, C. J. & Heiri, O., 2018, In : Quaternary Science Reviews. 191, p. 337 - 347

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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161 Downloads (Pure)

Environmental legacy contributes to the resilience of methane consumption in a laboratory microcosm system

Krause, S., Meima-Franke, M., Veraart, A. J., Ren, G., Ho, A. & Bodelier, P. L. E., 2018, In : Scientific Reports. 9, 8862.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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133 Downloads (Pure)

Impact of peat mining, and restoration on methane turnover potentials and methane-cycling microorganisms in a northern bog

Reumer, M., Harnisz, M., Lee, H. J., Reim, A., Grunert, O., Putkinen, A., Fritze, H., Bodelier, P. L. E. & Ho, A., 2018, In : Applied and Environmental Microbiology. 84, 3, e02218-17.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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259 Downloads (Pure)

Living apart together – Bacterial volatiles influence methanotrophic growth and activity.

Veraart, A. J., Garbeva, P. V., van Beersum, F., Ho, A., Hordijk, C. A., Meima-Franke, M., Zweers, A. J. & Bodelier, P. L. E., 2018, In : ISME Journal. 12, p. 1163-1166

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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133 Downloads (Pure)

Modulation of litter decomposition by the soil microbial food web under influence of land use change

Heijboer, A., de Ruiter, P. C., Bodelier, P. L. E. & Kowalchuk, G. A., 2018, In : Frontiers in Microbiology. 9, 02860.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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105 Downloads (Pure)

Organic residue amendments to modulate greenhouse gas emissions from agricultural soils

Brenzinger, K., Drost, S. M., Korthals, G. W. & Bodelier, P. L. E., 2018, In : Frontiers in Microbiology. 9, 3035.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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133 Downloads (Pure)

Positive diversity-functioning relationships in model communities of methanotrophic bacteria

Schnyder, E., Bodelier, P. L. E., Hartmann, M., Henneberger, R. & Niklaus, P. A., 2018, In : Ecology. 99, 3, p. 714-723

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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310 Downloads (Pure)

Predominance of methanogens over methanotrophs in rewetted fens characterized by high methane emissions

Wen, X., Unger, V., Jurasinski, G., Koebsch, F., Horn, F., Rehder, G., Sachs, T., Zak, D., Lischeid, G., Knorr, K-H., Böttcher, M. E., Winkel, M., Bodelier, P. L. E. & Liebner, S., 2018, In : Biogeosciences. 15, p. 6519-6536

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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123 Downloads (Pure)

Resistance and Recovery of Methane Oxidizing Communities depends on Stress Regime and History

van Kruistum, H., Bodelier, P. L. E., Ho, A., Meima-Franke, M. & Veraart, A. J., 2018, In : Frontiers in Microbiology. 9, 01714.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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95 Downloads (Pure)
2017

Effects of bio-based residue amendments on greenhouse gas emission from agricultural soil are stronger than effects of soil type with different microbial community composition.

Ho, A., Ijaz, U. Z., Janssens, T., Ruijs, R., Kim, S. Y., De Boer, W., Termorshuizen, A. J., van der Putten, W. H. & Bodelier, P. L. E., 2017, In : Global Change Biology Bioenergy. 9, 12, p. 1707-1720

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
392 Downloads (Pure)

Microbial Ecosystem Functions in Wetlands Under Disturbance

Steenbergh, A. K., Veraart, A. J., Ho, A. & Bodelier, P. L. E., 2017, Microbial Biomass: A Paradigm Shift in Terrestrial Biochemistry. Tate, K. (ed.). World Scientific

Research output: Chapter in book/volumeChapterScientific

4 Downloads (Pure)

Revisiting life strategy concepts in environmental microbial ecology

Ho, A., Di Lonardo, P. & Bodelier, P. L. E., 2017, In : FEMS Microbiology Ecology. 93, 3, fix006.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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219 Downloads (Pure)

Soil warming and fertilization altered rates of nitrogen transformation processes and selected for adapted ammonia-oxidizing archaea in sub-arctic grassland soil

Daebeler, A., Bodelier, P. L. E., Hefting, M. M., Rütting, T. & Laanbroek, H. J., Apr 2017, In : Soil Biology & Biochemistry. 107, p. 114-124

Research output: Contribution to journal/periodicalArticleScientificpeer-review

3 Downloads (Pure)

Trophic state changes can affect the importance of methane-derived carbon in aquatic food webs

Schilder, J., Van Hardenbroek, M., Bodelier, P. L. E., Kirilova, E. P., Leuenberger, M., Lotter, A. F. & Heiri, O., 2017, In : Proceedings of the Royal Society B-Biological Sciences. 284, 1857, 278.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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74 Downloads (Pure)
2016

Biotic interactions in microbial communities as modulators of biogeochemical processes: Methanotrophy as a model system.

Ho, A., Angel, R., Veraart, A. J., Daebeler, A., Jia, Z., Kim, S. Y., Kerckhof, F. M., Boon, N. & Bodelier, P. L. E., 2016, In : Frontiers in Microbiology. 7, 1285.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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231 Downloads (Pure)

Conventional methanotrophs are responsible for atmospheric methane oxidation in paddy soils

Cai, Y., Yan, Z., Bodelier, P. L. E., Conrad, R. & Jia, Z., 01 Jun 2016, In : Nature Communications. 7, 11728.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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279 Downloads (Pure)

Recurrence and frequency of disturbance have cumulative effect on methanotrophic activity, abundance, and community structure.

Ho, A., van den Brink, E., Reim, A., Krause, S. & Bodelier, P. L. E., 2016, In : Frontiers in Microbiology. 6, 01493.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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380 Downloads (Pure)
2015

Ammonia-limited conditions cause of Thaumarchaeal dominance in volcanic grassland soil

Daebeler, A., Bodelier, P. L. E., Hefting, M. M. & Laanbroek, H. J., 2015, In : FEMS Microbiology Ecology. 91, 3, fiv014.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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229 Downloads (Pure)

Beyond nitrogen: the importance of phosphorus for CH4 oxidation in soils and sediments

Veraart, A. J., Steenbergh, A. K., Ho, A., Kim, S. Y. & Bodelier, P. L. E., 2015, In : Geoderma. 259-260, December, p. 337-346

Research output: Contribution to journal/periodicalArticleScientificpeer-review

6 Downloads (Pure)

Combined effects of carbon, nitrogen and phosphorus on CH4 production and denitrification in wetland sediments

Kim, S. Y., Veraart, A., Meima-Franke, M. & Bodelier, P., 2015, In : Geoderma. Online, p. 354-361

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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222 Downloads (Pure)

Compositional and functional stability of aerobic methane consuming communities in drained and rewetted peat meadows

Krause, S., Niklaus, P. A., Morcillo, S. B., Meima-Franke, M., Lüke, C., Reim, A. & Bodelier, P. L. E., 2015, In : FEMS Microbiology Ecology. 91, 11, fiv119.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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166 Downloads (Pure)

Diazotrophic methanotrophs in peatlands: the missing link?

Ho, A. & Bodelier, P., 2015, In : Plant and Soil. 389, 1-2, p. 419-423

Research output: Contribution to journal/periodicalArticleScientificpeer-review

10 Downloads (Pure)

Field-scale tracking of active methane-oxidizing communities in a landfill-cover soil reveals spatial and seasonal variability

Henneberger, R., Chiri, E., Bodelier, P. L. E., Frenzel, P., Luke, C. & Schroth, M. H., 2015, In : Environmental Microbiology. 17, 5, p. 1721-1737

Research output: Contribution to journal/periodicalArticleScientificpeer-review

1 Downloads (Pure)

Manure-associated stimulation of soil-borne methanogenic activity in agricultural soils

Ho, A., El-Hawwary, A. H. M., Kim, S. Y., Meima-Franke, M. & Bodelier, P., 2015, In : Biology and Fertility of Soils. 51, 4, p. 511-516

Research output: Contribution to journal/periodicalArticleScientificpeer-review

1 Downloads (Pure)

Mechanisms controlling greenhouse gas emissions from soils: Special Issue

Kim, P. J., Bodelier, P. L. E. & Lu, Y., 2015, In : Geoderma. 259-260

Research output: Contribution to journal/periodicalSpecial issue (editorship)Scientific

Mechanisms controlling greenhouse gas emissions from soils

Kim, P. J., Bodelier, P. L. E. & Lu, Y., 2015, In : Geoderma. 259-260, December, p. 321-322

Research output: Contribution to journal/periodicalArticleScientificpeer-review

5 Downloads (Pure)

Peatland vascular plant functional types affect methane dynamics by altering microbial community structure

Robroek, B. J. M., Jassey, V. E. J., Kox, M. A. R., Berendsen, R. L., Mills, R. T. E., Cécillon, L., Puissant, J., Meima-Franke, M., Bakker, P. A. H. M. & Bodelier, P., 2015, In : Journal of Ecology. 103, 4, p. 925-934

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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220 Downloads (Pure)

Phylogenetic characterization of phosphatase-expressing bacterial communities in Baltic Sea sediments

Steenbergh, A., Bodelier, P., Hoogveld, H. L., Slomp, C. P. & Laanbroek, H. J., 2015, In : Microbes and Environments. 30, 2, p. 192-195 ME14074.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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130 Downloads (Pure)

Sustainability: Bypassing the methane cycle: News & Views

Bodelier, P. L. E., 30 Jul 2015, In : Nature. 523, 7562, p. 534-535 2 p.

Research output: Contribution to journal/periodicalArticleScientific

6 Downloads (Pure)

Unexpected stimulation of soil methane uptake as emergent property of agricultural soils following bio-based residue application

Ho, A., Reim, A., Kim, S. Y., Meima-Franke, M., Termorshuizen, A. J., De Boer, W., Van der Putten, W. H. & Bodelier, P. L. E., 2015, In : Global Change Biology. 21, 10, p. 3864-3879

Research output: Contribution to journal/periodicalArticleScientificpeer-review

4 Downloads (Pure)
2014

Cattle Manure Enhances Methanogens Diversity and Methane Emissions Compared to Swine Manure under Rice Paddy

Kim, S. Y., Pramanik, P., Bodelier, P. L. E. & Kim, P. J., 2014, In : PLoS One. 9, 12, e113593.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
201 Downloads (Pure)

Competitive interactions between methane- and ammonia-oxidizing bacteria modulate carbon and nitrogen cycling in paddy soil

Zheng, Y., Huang, R., Wang, B., Bodelier, P. L. E. & Jia, Z., 2014, In : Biogeosciences. 11, p. 3353-3368

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
592 Downloads (Pure)

Effect of redox conditions on bacterial community structure in Baltic Sea sediments with contrasting redox conditions

Steenbergh, A. K., Bodelier, P. L. E., Slomp, C. P. & Laanbroek, H. J., 2014, In : PLoS One. 9, 3, e92401.

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
File
260 Downloads (Pure)

Extraction Methods, Variability Encountered in

Bodelier, P. L. E., 2014, Encyclopedia of Metagenomics. Nelson, K. E. (ed.). Heidelberg: Springer, 9 p.

Research output: Chapter in book/volumeChapterScientific

4 Downloads (Pure)

Factors affecting methane efluxes from terrestrial ecosystems: editorial

Bodelier, P. L. E., 2014, In : Plant and Soil. Virtual special issue nr 4

Research output: Contribution to journal/periodicalArticleScientific

2 Downloads (Pure)

Interactions between methane and nitrogen cycling; current metagenomics studies and future trends

Bodelier, P. L. E. & Steenbergh, A. K., 2014, Metagenomics of the Microbial Nitrogen Cycle. Marco, D. (ed.). Caister Academic Press

Research output: Chapter in book/volumeChapterScientific

5 Downloads (Pure)

Interactions between methane and the nitrogen cycle in light of climate change

Bodelier, P. L. E. & Steenbergh, A. K., 2014, In : Current Opinion in Environmental Sustainability. 9-10, October, p. 26-36

Research output: Contribution to journal/periodicalArticleScientificpeer-review

Open Access
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1288 Downloads (Pure)

Interactions between Thaumarchaea, Nitrospira and methanotrophs modulate autotrophic nitrification in volcanic grassland soil

Daebeler, A., Bodelier, P. L. E., Yan, Z., Hefting, M. M., Jia, Z. & Laanbroek, H. J., 2014, In : ISME Journal. 8, p. 2397-2410

Research output: Contribution to journal/periodicalArticleScientificpeer-review

2 Downloads (Pure)