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• 2020

  Classification of Aspergillus, Penicillium, Talaromyces and related genera (Eurotiales): An overview of families, genera, subgenera, sections, series and species

  Houbraken, J., Kocsubé, S., Visagie, C. M., Yilmaz, N., Wang, X-C., Meijer, M., Kraak, B., Hubka, V., Bensch, K., Samson, R. A. & Frisvad, J. C., Mar 2020, In: Studies in Mycology. 95, p. 5-169 165 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Eurotiales
  • Talaromyces
  • Penicillium
  • Aspergillus
  • taxonomy

• New section and species in Talaromyces

  Sun, B-D., Chen, A. J., Houbraken, J., Frisvad, J. C., Wu, W-P., Wei, H-L., Zhou, Y-G., Jiang, X-Z. & Samson, R. A., 2020, In: MycoKeys. 68, p. 75-113 39 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Talaromyces
  • China
  • phylogenetics
  • agricultural soil
  • new species

• New species in Aspergillus section Usti and an overview of Aspergillus section Cavernicolarum

  Sun, B. D., Houbraken, J., Frisvad, J. C., Jiang, X. Z., Chen, A. J. & Samson, R. A., Sep 2020, In: International Journal of Systematic and Evolutionary Microbiology. 70, 10, p. 5401-5416

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

• Preface

  Samson, R. A. & Crous, P. W., Mar 2020, In: Studies in Mycology. 95, p. 1-4 4 p.

  Research output: Contribution to journal/periodical › Article › Popularizing

  Open Access

• Preface: Genera of Hyphomycetes: a Tribute to Keith A. Seifert

  Samson, R. A. & Crous, P. W., Mar 2020, In: Studies in Mycology. 95, p. 1-4 4 p.

  Research output: Contribution to journal/periodical › Article › Professional

  Open Access

• Revisiting Metarhizium and the description of new species from Thailand

  Mongkolsamrit, S., Khonsanit, A., Thanakitpipattana, D., Tasanathai, K., Noisripoom, W., Lamlertthon, S., Himaman, W., Houbraken, J., Samson, R. A. & Luangsa-Ard, J., Mar 2020, In: Studies in Mycology. 95, p. 171-251 81 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Metarhizium
  • Thailand
  • Lepidoptera
  • new species
  • Hemiptera
• 2019

  cyp51A Mutations, Extrolite Profiles, and Antifungal Susceptibility in Clinical and Environmental Isolates of the Aspergillus viridinutans Species Complex

  Talbot, J. J., Frisvad, J. C., Meis, J. F., Hagen, F., Verweij, P. E., Hibbs, D. E., Lai, F., Groundwater, P. W., Samson, R. A., Kidd, S. E., Barrs, V. R. & Houbraken, J., Nov 2019, In: Antimicrobial Agents and Chemotherapy. 63, 11

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Food and Indoor Fungi. Westerdijk Laboratory Manual series: 2, second edition

  Samson, R. A., Houbraken, J., Thrane, U., Frisvad, JC. & Andersen, B., 2019, 2 ed. Utrecht: Westerdijk Fungal Biodiversity Institute. 481 p. (Westerdijk Laboratory Manual series)

  Research output: Book/Report › Book › Scientific

• Mould spoilage of foods and beverages: Using the right methodology

  Rico-Munoz, E., Samson, R. A. & Houbraken, J., Aug 2019, In: Food Microbiology. 81, p. 51-62

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

• Phylogenetic re-evaluation of Thielavia with the introduction of a new family Podosporaceae

  Wang, X. W., Bai, F. Y., Bensch, K., Meijer, M., Sun, B. D., Han, Y. F., Crous, P. W., Samson, R. A., Yang, F. Y. & Houbraken, J., Jun 2019, In: Studies in Mycology. 93, p. 155-252 98 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Sordariales
  • Podospora
  • Thielavia
  • new family
  • Madurella

• Redefining Humicola sensu stricto and related genera in the Chaetomiaceae

  Wang, X. W., Yang, F. Y., Meijer, M., Kraak, B., Sun, B. D., Jiang, Y-L., Wu, Y-M., Bai, F. Y., Seifert, K. A., Crous, P. W., Samson, R. A. & Houbraken, J., Jun 2019, In: Studies in Mycology. 93, p. 65 - 153

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Chaetomiaceae
  • Humicola
  • Fungal Spores
  • Hyphae
  • Spores

• Resurrection of Paraisaria in the Ophiocordycipitaceae with three new species from Thailand

  Mongkolsamrit, S., Noisripoom, W., Arnamnart, N., Lamlertthon, S., Himaman, W., Jangsantear, P., Samson, R. A. & Luangsa-ard, J. J., Sep 2019, In: Mycological Progress. 18, 9, p. 1213-1230

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Taxonomy of section and their production of aflatoxins, ochratoxins and other mycotoxins

  Frisvad, J. C., Hubka, V., Ezekiel, C. N., Hong, S-B., Nováková, A., Chen, A. J., Arzanlou, M., Larsen, T. O., Sklenář, F., Mahakarnchanakul, W., Samson, R. A. & Houbraken, J., Jun 2019, In: Studies in Mycology. 93, p. 1-63 63 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Ochratoxins
  • ochratoxins
  • Aflatoxins
  • Mycotoxins
  • Aspergillus alliaceus

• Vegetable oils as carbon and energy source for Aureobasidium melanogenum in batch cultivation

  van Nieuwenhuijzen, E. J., Sailer, M. F., van den Heuvel, E. R., Rensink, S., Adan, O. C. G. & Samson, R. A., Jun 2019, In: MicrobiologyOpen. p. e764

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Plant Oils
  • Linseed Oil
  • Oils
  • Carbon
  • nile red
• 2018

  Cladosporium species in indoor environments

  Bensch, K., Groenewald, J. Z., Meijer, M., Dijksterhuis, J., Jurjević, Ž., Andersen, B., Houbraken, J., Crous, P. W. & Samson, R. A., Mar 2018, In: Studies in Mycology. 89, p. 177 - 301

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Cladosporium
  • Introduced Species
  • Northern Africa
  • mycobiota
  • North America

• New Penicillium and Talaromyces species from honey, pollen and nests of stingless bees

  Barbosa, R. N., Bezerra, J. D. P., Souza-Motta, C. M., Frisvad, J. C., Samson, R. A., Oliveira, N. T. & Houbraken, J., Oct 2018, In: Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology. 111, 10, p. 1883-1912

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Penicillium hermansii, a new species causing smoky mould in white button mushroom production

  Houbraken, J., Seifert, K. A. & Samson, R. A., 2018, In: Mycological Progress. 18, 1-2, p. 229-236 8 p., https://doi.org/10.1007/s11557-018-1407-4.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Penicillium
  • mushroom growing
  • Agaricales
  • Agaricus bisporus
  • mushroom
• 2017

  Cephalotrichum and related synnematous fungi with notes on species from the built environment

  Woudenberg, J. H. C., Sandoval-Denis, M., Houbraken, J., Seifert, K. A. & Samson, R. A., Sep 2017, In: Studies in Mycology. 88, p. 137-159

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus

  de Vries, R. P., Riley, R., Wiebenga, A., Aguilar-Osorio, G., Amillis, S., Uchima, C. A., Anderluh, G., Asadollahi, M., Askin, M., Barry, K. W., Battaglia, E., Bayram, O., Benocci, T., Braus-Stromeyer, S. A., Caldana, C., Canovas, D., Cerqueira, G. C., Chen, F., Chen, W., Choi, C. & 97 others, Clum, A., Correa dos Santos, R. A., de Lima Damasio, A. R., Diallinas, G., Emri, T., Fekete, E., Flipphi, M., Freyberg, S., Gallo, A., Gournas, C., Habgood, R., Hainaut, M., Laura Harispe, M., Henrissat, B., Hilden, K. S., Hope, R., Hossain, A., Karabika, E., Karaffa, L., Karanyi, Z., Krasevec, N., Kuo, A., Kusch, H., LaButti, K. M., Lagendijk, E. L., Lapidus, A., Levasseur, A., Lindquist, E. A., Lipzen, A. M., Logrieco, A. F., Maccabe, A., Makela, M. R., Malavazi, I., Melin, P., Meyer, V., Mielnichuk, N., Miskei, M., Molnar, A. P., Mule, G., Ngan, C. Y., Orejas, M., Orosz, E., Ouedraogo, J. P., Overkamp, K. M., Park, H-S., Perrone, G., Piumi, F., Punt, P. J., Ram, A. F. J., Ramon, A., Rauscher, S., Record, E., Riano-Pachon, D. M., Robert, V., Roehrig, J., Ruller, R., Salamov, A., Salih, N. S., Samson, R. A., Sandor, E., Sanguinetti, M., Schutze, T., Sepcic, K., Shelest, E., Sherlock, G., Sophianopoulou, V., Squina, F., Sun, H., Susca, A., Todd, R. B., Tsang, A., Unkles, S. E., van de Wiele, N., van Rossen-Uffink, D., de Castro Oliveira, J. V., Vesth, T. C., Visser, J., Yu, J-H., Zhou, M., Andersen, M. R., Archer, D. B., Baker, S. E., Benoit, I., Brakhage, A. A., Braus, G. H., Fischer, R., Frisvad, J. C., Goldman, G. H., Houbraken, J., Oakley, B. R., Pocsi, I., Scazzocchio, C., Seiboth, B., vanKuyk, P. A., Wortman, J. R., Dyer, P. S. & Grigoriev, I. V., 14 Feb 2017, In: Genome Biology. 18

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Current taxonomy and identification of foodborne fungi

  Houbraken, J. & Samson, R. A., Oct 2017, In: Current Opinion in Food Science. 17, p. 84-88

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

• Discovery of Aspergillus frankstonensis sp nov during environmental sampling for animal and human fungal pathogens

  Talbot, J. J., Houbraken, J., Frisvad, J. C., Samson, R. A., Kidd, S. E., Pitt, J. I., Lindsay, S., Beatty, J. A. & Barrs, V. R., 09 Aug 2017, In: PLoS One. 12, 8

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Indoor airborne fungal pollution in newborn units in Turkey

  Demirel, R., Sen, B., Kadaifciler, D., Yoltas, A., Okten, S., Ozkale, E., Berikten, D., Samson, R. A., Haliki Uztan, A., Yilmaz, N., Abaci Gunyar, O., Aydogdu, H., Asan, A., Kivanc, M., Ozdil, S. & Sakartepe, E., 2017, In: Environmental Monitoring and Assessment. 189, 7, p. 362 1 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  • Pollution
  • hospital
  • pollution
  • Air
  • air

• Phylogenetic analysis of Monascus and new species from honey, pollen and nests of stingless bees

  Barbosa, R. N., Leong, S-L. L., Vinnere-Pettersson, O., Chen, A. J., Souza-Motta, C. M., Frisvad, J. C., Samson, R. A., Oliveira, N. T. & Houbraken, J., Mar 2017, In: Studies in Mycology. 86, p. 29-51

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Phylogeny of xerophilic aspergilli (subgenus Aspergillus) and taxonomic revision of section Restricti

  Sklenar, F., Jurjevic, Z., Zalar, P., Frisvad, J. C., Visagie, C. M., Kolarik, M., Houbraken, J., Chen, A. J., Yilmaz, N., Seifert, K. A., Coton, M., Deniel, F., Gunde-Cimerman, N., Samson, R. A., Peterson, S. W. & Hubka, V., Sep 2017, In: Studies in Mycology. 88, p. 161-236

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Polyphasic taxonomy of Aspergillus section Aspergillus (formerly Eurotium), and its occurrence in indoor environments and food

  Chen, A. J., Hubka, V., Frisvad, J. C., Visagie, C. M., Houbraken, J., Meijer, M., Varga, J., Demirel, R., Jurjevic, Z., Kubatova, A., Sklenar, F., Zhou, Y. G. & Samson, R. A., Sep 2017, In: Studies in Mycology. 88, p. 37-135

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• Response to Pitt & Taylor 2016: Conservation of Aspergillus with A. niger as the conserved type is unnecessary and potentially disruptive

  Samson, R. A., Hubka, V., Varga, J., Houbraken, J., Hong, S-B., Klaassen, C. H. W., Perrone, G., Seifert, K. A., Magista, D., Visagie, C. M., Kocsube, S., Szigeti, G., Yaguchi, T., Peterson, S. W. & Frisvad, J. C., Dec 2017, In: Taxon. 66, 6, p. 1439-1446

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

• Scopulariopsis and scopulariopsis-like species from indoor environments

  Woudenberg, J. H. C., Meijer, M., Houbraken, J. & Samson, R. A., Sep 2017, In: Studies in Mycology. 88, p. 1-35

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

• The fungal composition of natural biofinishes on oil-treated wood

  van Nieuwenhuijzen, E. J., Houbraken, J. A. M. P., Punt, P. J., Roeselers, G., Adan, O. C. G. & Samson, R. A., 2017, In: Fungal Biology and Biotechnology. 4, 1, p. 2 1 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • oil
  • vegetable oil
  • timber
  • repair
  • fungus
• 2016

  A phylogenetic revision of Penicillium sect. Exilicaulis, including nine new species from fynbos in South Africa

  Visagie, C. M., Seifert, K. A., Houbraken, J., Samson, R. A. & Jacobs, K., Jun 2016, In: IMA Fungus. 7, 1, p. 75-117 43 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • fynbos
  • Penicillium
  • South Africa
  • new species
  • phylogenetics

• Aspergillus europaeus sp nov., a widely distributed soil-borne species related to A-wentii (section Cremei)

  Hubka, V., Novakova, A., Samson, R. A., Houbraken, J., Frisvad, J. C., Sklenar, F., Varga, J. & Kolarik, M., Jun 2016, In: Plant Systematic and Evolution. 302, 6, p. 641-650

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

• Aspergillus is monophyletic: Evidence from multiple gene phylogenies and extrolites profiles

  Kocsubé, S., Perrone, G., Magistà, D., Houbraken, J., Varga, J., Szigeti, G., Hubka, V., Hong, S-B., Frisvad, J. C. & Samson, R. A., Sep 2016, In: Studies in Mycology. 85, p. 199-213 15 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Phylogeny
  • Aspergillus
  • phylogeny
  • Genes
  • Names

• Aspergillus section Nidulantes (formerly Emericella): Polyphasic taxonomy, chemistry and biology

  Chen, A. J., Frisvad, J. C., Sun, B. D., Varga, J., Kocsubé, S., Dijksterhuis, J., Kim, D. H., Hong, S-B., Houbraken, J. & Samson, R. A., Dec 2016, In: Studies in Mycology. 84, p. 1-118 118 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Emericella
  • Sterigmatocystin
  • sterigmatocystin
  • Echinocandins
  • Mycotoxins

• A taxonomic review of Penicillium species producing conidiophores with solitary phialides, classified in section Torulomyces

  Visagie, C., Houbraken, J., Dijksterhuis, J., Seifert, K. A., Jacobs, K. & Samson, R. A., 2016, In: Persoonia: Molecular Phylogeny and Evolution of Fungi. 36, p. 134-155 21 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • conidiophores
  • Penicillium
  • neotypes
  • phylogeny
  • species identification

• Aureobasidium melanogenum: a native of dark biofinishes on oil treated wood

  van Nieuwenhuijzen, E. J., Houbraken, J. A. M. P., Meijer, M., Adan, O. C. G. & Samson, R. A., May 2016, In: Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology. 109, 5, p. 661-83 23 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Oils
  • Netherlands
  • Fungi
  • Linseed Oil
  • Cameroon

• Beach sand and the potential for infectious disease transmission: observations and recommendations

  Solo-Gabriele, H. M., Harwood, V. J., Kay, D., Fujioka, R. S., Sadowsky, M. J., Whitman, R. L., Wither, A., Canica, M., Da Fonseca, R. C., Duarte, A., Edge, T. A., Gargate, M. J., Gunde-Cimerman, N., Hagen, F., Mclellan, S. L., Da Silva, A. N., Babic, M. N., Prada, S., Rodrigues, R., Romao, D. & 9 others, Sabino, R., Samson, R. A., Segal, E., Staley, C., Taylor, H. D., Verissimo, C., Viegas, C., Barroso, H. & Brandao, J. C., Feb 2016, In: Journal of the Marine Biological Association of the United Kingdom. 96, 1, p. 101-120

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

• Diversity and taxonomy of Chaetomium and chaetomium-like fungi from indoor environments

  Wang, X. W., Houbraken, J., Groenewald, J. Z., Meijer, M., Andersen, B., Nielsen, K. F., Crous, P. W. & Samson, R. A., 2016, In: Studies in Mycology. 84, p. 145-224 80 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Chaetomiaceae
  • Chaetomium
  • Fungi
  • Chaetomium globosum
  • taxonomy

• Four novel Talaromyces species isolated from leaf litter from Colombian Amazon rain forests

  Yilmaz, N., López-Quintero, C. A., Vasco-Palacios, A. M., Frisvad, J. C., Theelen, B., Boekhout, T., Samson, R. A. & Houbraken, J., 2016, In: Mycological Progress. 15, 10, p. 1041-1056 16 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Talaromyces
  • Rainforest
  • leaf litter
  • rain forest
  • Amazonia

• Generic hyper-diversity in Stachybotriaceae

  Lombard, L., Houbraken, J., Decock, C., Samson, R. A., Meijer, M., Réblová, M., Groenewald, J. Z. & Crous, P. W., 29 Apr 2016, In: Persoonia. 36, p. 156-246

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Myrothecium
  • Stachybotrys
  • new genus
  • biocontrol agent
  • phylogenetics

• New Talaromyces species from indoor environments in China

  Chen, A. J., Sun, B. D., Houbraken, J., Frisvad, J. C., Yilmaz, N., Zhou, Y. G. & Samson, R. A., Dec 2016, In: Studies in Mycology. 84, p. 119-144 26 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Talaromyces
  • China
  • new species
  • Talaromyces islandicus
  • Beijing

• Overlooked competing asexual and sexually typified generic names of Ascomycota with recommendations for their use or protection

  Rossman, A. Y., Allen, W. C., Braun, U., Castlebury, L. A., Chaverri, P., Crous, P. W., Hawksworth, D. L., Hyde, K. D., Johnston, P., Lombard, L., Romberg, M., Samson, R. A., Seifert, K. A., Stons, J. K., Udayanga, D. & White, J. F., 29 Nov 2016, In: IMA Fungus. 7, 2, p. 289-308 20 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Ascomycota
  • Claviceps
  • Neonectria
  • Names
  • Diaporthe

• Phylogenetic reassessment of the Chaetomium globosum species complex

  Wang, X. W., Lombard, L., Groenewald, J. Z., Li, J., Videira, S. I. R., Samson, R. A., Liu, X. Z. & Crous, P. W., 2016, In: Persoonia. 36, p. 83-133 51 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Chaetomium globosum
  • species complex
  • phylogenetics
  • phylogeny
  • Chaetomium

• Taxonomic re-evaluation of species in Talaromyces section Islandici, using a polyphasic approach.

  Yilmaz, N., Visagie, C., Frisvad, JC., Houbraken, J., Jacobs, K. & Samson, R. A., 2016, In: Persoonia: Molecular Phylogeny and Evolution of Fungi. 36, p. 37-56 24 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • Talaromyces
  • taxonomy
  • evaluation
  • phylogenetics
  • phylogeny

• Taxonomy of Aspergillus, Penicillium and Talaromyces and its significance for biotechnology

  Houbraken, J., Samson, R. A. & Yilmaz, N., 2016, Aspergillus and Penicillium in the Post-genomic Era. de Vries, R., Benoit Gelber, I. & Rordam Andersen, M. (eds.). Norfolk, p. 1-15 15 p.

  Research output: Chapter in book/volume › Chapter › Scientific › peer-review

  • Talaromyces
  • Penicillium
  • Aspergillus
  • biotechnology
  • Eurotiales

• Wood staining fungi revealed taxonomic novelties in Pezizomycotina: New order Superstratomycetales and new species Cyanodermella oleoligni

  van Nieuwenhuijzen, E. J., Miadlikowska, J. M., Houbraken, J. A. M. P., Adan, O. C. G., Lutzoni, F. M. & Samson, R. A., Dec 2016, In: Studies in Mycology. 85, p. 107-124 18 p.

  Research output: Contribution to journal/periodical › Article › Scientific › peer-review

  Open Access

  • wood staining
  • Peptide Elongation Factor 1
  • new order
  • Pezizomycotina
  • Fungi