Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus

Ronald P. de Vries; Robert Riley; Ad Wiebenga; Guillermo Aguilar-Osorio; Sotiris Amillis; Cristiane Akemi Uchima; Gregor Anderluh; Mojtaba Asadollahi; Marion Askin; Kerrie W Barry; Evy Battaglia; Ozgur Bayram; Tiziano Benocci; Susanna A. Braus-Stromeyer; Camila Caldana; David Canovas; Gustavo C. Cerqueira; Fusheng Chen; Wanping Chen; Cindy Choi; Alicia Clum; Renato Augusto Correa dos Santos; Andre Ricardo de Lima Damasio; George Diallinas; Tamas Emri; Erzsebet Fekete; Michel Flipphi; Susanne Freyberg; Antonia Gallo; Christos Gournas; Rob Habgood; Matthieu Hainaut; Maria Laura Harispe; Bernard Henrissat; Kristiina S. Hilden; Ryan Hope; Abeer Hossain; Eugenia Karabika; Levente Karaffa; Zsolt Karanyi; Nada Krasevec; Alan Kuo; Harald Kusch; Kurt M LaButti; Ellen L. Lagendijk; Alla Lapidus; Anthony Levasseur; Erika A Lindquist; Anna M Lipzen; Antonio F. Logrieco; Andrew Maccabe; Miia R. Makela; Iran Malavazi; Petter Melin; Vera Meyer; Natalia Mielnichuk; Marton Miskei; Akos P. Molnar; Giuseppina Mule; Chew Yee Ngan; Margarita Orejas; Erzsebet Orosz; Jean Paul Ouedraogo; Karin M Overkamp; Hee-Soo Park; Giancarlo Perrone; Francois Piumi; Peter J Punt; Arthur F J Ram; Ana Ramon; Stefan Rauscher; Eric Record; Diego Mauricio Riano-Pachon; Vincent Robert; Julian Roehrig; Roberto Ruller; Asaf Salamov; Nadhira S. Salih; Rob A. Samson; Erzsebet Sandor; Manuel Sanguinetti; Tabea Schutze; Kristina Sepcic; Ekaterina Shelest; Gavin Sherlock; Vicky Sophianopoulou; FabioM. Squina; Hui Sun; Antonia Susca; Richard B Todd; Adrian Tsang; Shiela E. Unkles; Nathalie van de Wiele; Diana van Rossen-Uffink; Juliana Velasco de Castro Oliveira; Tammi C. Vesth; Jaap Visser; Jae-Hyuk Yu; Miaomiao Zhou; Mikael R Andersen; David B. Archer; Scott E Baker; Isabelle Benoit; Axel A Brakhage; Gerhard H. Braus; Reinhard Fischer; Jens C. Frisvad; Gustavo H. Goldman; Jos Houbraken; Berl R Oakley; Istvan Pocsi; Claudio Scazzocchio; Bernhard Seiboth; Patricia A vanKuyk; Jennifer Russo Wortman; Paul S Dyer; Igor V Grigoriev

doi:10.1186/s13059-017-1151-0

Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus

Ronald P. de Vries, Robert Riley, Ad Wiebenga, Guillermo Aguilar-Osorio, Sotiris Amillis, Cristiane Akemi Uchima, Gregor Anderluh, Mojtaba Asadollahi, Marion Askin, Kerrie W Barry, Evy Battaglia, Ozgur Bayram, Tiziano Benocci, Susanna A. Braus-Stromeyer, Camila Caldana, David Canovas, Gustavo C. Cerqueira, Fusheng Chen, Wanping Chen, Cindy ChoiAlicia Clum, Renato Augusto Correa dos Santos, Andre Ricardo de Lima Damasio, George Diallinas, Tamas Emri, Erzsebet Fekete, Michel Flipphi, Susanne Freyberg, Antonia Gallo, Christos Gournas, Rob Habgood, Matthieu Hainaut, Maria Laura Harispe, Bernard Henrissat, Kristiina S. Hilden, Ryan Hope, Abeer Hossain, Eugenia Karabika, Levente Karaffa, Zsolt Karanyi, Nada Krasevec, Alan Kuo, Harald Kusch, Kurt M LaButti, Ellen L. Lagendijk, Alla Lapidus, Anthony Levasseur, Erika A Lindquist, Anna M Lipzen, Antonio F. Logrieco, Andrew Maccabe, Miia R. Makela, Iran Malavazi, Petter Melin, Vera Meyer, Natalia Mielnichuk, Marton Miskei, Akos P. Molnar, Giuseppina Mule, Chew Yee Ngan, Margarita Orejas, Erzsebet Orosz, Jean Paul Ouedraogo, Karin M Overkamp, Hee-Soo Park, Giancarlo Perrone, Francois Piumi, Peter J Punt, Arthur F J Ram, Ana Ramon, Stefan Rauscher, Eric Record, Diego Mauricio Riano-Pachon, Vincent Robert, Julian Roehrig, Roberto Ruller, Asaf Salamov, Nadhira S. Salih, Rob A. Samson, Erzsebet Sandor, Manuel Sanguinetti, Tabea Schutze, Kristina Sepcic, Ekaterina Shelest, Gavin Sherlock, Vicky Sophianopoulou, FabioM. Squina, Hui Sun, Antonia Susca, Richard B Todd, Adrian Tsang, Shiela E. Unkles, Nathalie van de Wiele, Diana van Rossen-Uffink, Juliana Velasco de Castro Oliveira, Tammi C. Vesth, Jaap Visser, Jae-Hyuk Yu, Miaomiao Zhou, Mikael R Andersen, David B. Archer, Scott E Baker, Isabelle Benoit, Axel A Brakhage, Gerhard H. Braus, Reinhard Fischer, Jens C. Frisvad, Gustavo H. Goldman, Jos Houbraken, Berl R Oakley, Istvan Pocsi, Claudio Scazzocchio, Bernhard Seiboth, Patricia A vanKuyk, Jennifer Russo Wortman, Paul S Dyer, Igor V Grigoriev

Research output: Contribution to journal/periodical › Article › Scientific › peer-review

353 Citations (Scopus)

Original language	English
Journal	Genome Biology
Volume	18
DOIs	https://doi.org/10.1186/s13059-017-1151-0
Publication status	Published - 14 Feb 2017

Keywords

Aspergillus
Genome sequencing
Comparative genomics
Fungal biology

Access to Document

10.1186/s13059-017-1151-0

Cite this

de Vries, R. P., Riley, R., Wiebenga, A., Aguilar-Osorio, G., Amillis, S., Uchima, C. A., Anderluh, G., Asadollahi, M., Askin, M., Barry, K. W., Battaglia, E., Bayram, O., Benocci, T., Braus-Stromeyer, S. A., Caldana, C., Canovas, D., Cerqueira, G. C., Chen, F., Chen, W., ... Grigoriev, I. V. (2017). Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus. Genome Biology, 18. https://doi.org/10.1186/s13059-017-1151-0

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author = "{de Vries}, {Ronald P.} and Robert Riley and Ad Wiebenga and Guillermo Aguilar-Osorio and Sotiris Amillis and Uchima, {Cristiane Akemi} and Gregor Anderluh and Mojtaba Asadollahi and Marion Askin and Barry, {Kerrie W} and Evy Battaglia and Ozgur Bayram and Tiziano Benocci and Braus-Stromeyer, {Susanna A.} and Camila Caldana and David Canovas and Cerqueira, {Gustavo C.} and Fusheng Chen and Wanping Chen and Cindy Choi and Alicia Clum and {Correa dos Santos}, {Renato Augusto} and {de Lima Damasio}, {Andre Ricardo} and George Diallinas and Tamas Emri and Erzsebet Fekete and Michel Flipphi and Susanne Freyberg and Antonia Gallo and Christos Gournas and Rob Habgood and Matthieu Hainaut and {Laura Harispe}, Maria and Bernard Henrissat and Hilden, {Kristiina S.} and Ryan Hope and Abeer Hossain and Eugenia Karabika and Levente Karaffa and Zsolt Karanyi and Nada Krasevec and Alan Kuo and Harald Kusch and LaButti, {Kurt M} and Lagendijk, {Ellen L.} and Alla Lapidus and Anthony Levasseur and Lindquist, {Erika A} and Lipzen, {Anna M} and Logrieco, {Antonio F.} and Andrew Maccabe and Makela, {Miia R.} and Iran Malavazi and Petter Melin and Vera Meyer and Natalia Mielnichuk and Marton Miskei and Molnar, {Akos P.} and Giuseppina Mule and Ngan, {Chew Yee} and Margarita Orejas and Erzsebet Orosz and Ouedraogo, {Jean Paul} and Overkamp, {Karin M} and Hee-Soo Park and Giancarlo Perrone and Francois Piumi and Punt, {Peter J} and Ram, {Arthur F J} and Ana Ramon and Stefan Rauscher and Eric Record and Riano-Pachon, {Diego Mauricio} and Vincent Robert and Julian Roehrig and Roberto Ruller and Asaf Salamov and Salih, {Nadhira S.} and Samson, {Rob A.} and Erzsebet Sandor and Manuel Sanguinetti and Tabea Schutze and Kristina Sepcic and Ekaterina Shelest and Gavin Sherlock and Vicky Sophianopoulou and FabioM. Squina and Hui Sun and Antonia Susca and Todd, {Richard B} and Adrian Tsang and Unkles, {Shiela E.} and {van de Wiele}, Nathalie and {van Rossen-Uffink}, Diana and {de Castro Oliveira}, {Juliana Velasco} and Vesth, {Tammi C.} and Jaap Visser and Jae-Hyuk Yu and Miaomiao Zhou and Andersen, {Mikael R} and Archer, {David B.} and Baker, {Scott E} and Isabelle Benoit and Brakhage, {Axel A} and Braus, {Gerhard H.} and Reinhard Fischer and Frisvad, {Jens C.} and Goldman, {Gustavo H.} and Jos Houbraken and Oakley, {Berl R} and Istvan Pocsi and Claudio Scazzocchio and Bernhard Seiboth and vanKuyk, {Patricia A} and Wortman, {Jennifer Russo} and Dyer, {Paul S} and Grigoriev, {Igor V}",

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TY - JOUR

T1 - Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus

AU - de Vries, Ronald P.

AU - Riley, Robert

AU - Wiebenga, Ad

AU - Aguilar-Osorio, Guillermo

AU - Amillis, Sotiris

AU - Uchima, Cristiane Akemi

AU - Anderluh, Gregor

AU - Asadollahi, Mojtaba

AU - Askin, Marion

AU - Barry, Kerrie W

AU - Battaglia, Evy

AU - Bayram, Ozgur

AU - Benocci, Tiziano

AU - Braus-Stromeyer, Susanna A.

AU - Caldana, Camila

AU - Canovas, David

AU - Cerqueira, Gustavo C.

AU - Chen, Fusheng

AU - Chen, Wanping

AU - Choi, Cindy

AU - Clum, Alicia

AU - Correa dos Santos, Renato Augusto

AU - de Lima Damasio, Andre Ricardo

AU - Diallinas, George

AU - Emri, Tamas

AU - Fekete, Erzsebet

AU - Flipphi, Michel

AU - Freyberg, Susanne

AU - Gallo, Antonia

AU - Gournas, Christos

AU - Habgood, Rob

AU - Hainaut, Matthieu

AU - Laura Harispe, Maria

AU - Henrissat, Bernard

AU - Hilden, Kristiina S.

AU - Hope, Ryan

AU - Hossain, Abeer

AU - Karabika, Eugenia

AU - Karaffa, Levente

AU - Karanyi, Zsolt

AU - Krasevec, Nada

AU - Kuo, Alan

AU - Kusch, Harald

AU - LaButti, Kurt M

AU - Lagendijk, Ellen L.

AU - Lapidus, Alla

AU - Levasseur, Anthony

AU - Lindquist, Erika A

AU - Lipzen, Anna M

AU - Logrieco, Antonio F.

AU - Maccabe, Andrew

AU - Makela, Miia R.

AU - Malavazi, Iran

AU - Melin, Petter

AU - Meyer, Vera

AU - Mielnichuk, Natalia

AU - Miskei, Marton

AU - Molnar, Akos P.

AU - Mule, Giuseppina

AU - Ngan, Chew Yee

AU - Orejas, Margarita

AU - Orosz, Erzsebet

AU - Ouedraogo, Jean Paul

AU - Overkamp, Karin M

AU - Park, Hee-Soo

AU - Perrone, Giancarlo

AU - Piumi, Francois

AU - Punt, Peter J

AU - Ram, Arthur F J

AU - Ramon, Ana

AU - Rauscher, Stefan

AU - Record, Eric

AU - Riano-Pachon, Diego Mauricio

AU - Robert, Vincent

AU - Roehrig, Julian

AU - Ruller, Roberto

AU - Salamov, Asaf

AU - Salih, Nadhira S.

AU - Samson, Rob A.

AU - Sandor, Erzsebet

AU - Sanguinetti, Manuel

AU - Schutze, Tabea

AU - Sepcic, Kristina

AU - Shelest, Ekaterina

AU - Sherlock, Gavin

AU - Sophianopoulou, Vicky

AU - Squina, FabioM.

AU - Sun, Hui

AU - Susca, Antonia

AU - Todd, Richard B

AU - Tsang, Adrian

AU - Unkles, Shiela E.

AU - van de Wiele, Nathalie

AU - van Rossen-Uffink, Diana

AU - de Castro Oliveira, Juliana Velasco

AU - Vesth, Tammi C.

AU - Visser, Jaap

AU - Yu, Jae-Hyuk

AU - Zhou, Miaomiao

AU - Andersen, Mikael R

AU - Archer, David B.

AU - Baker, Scott E

AU - Benoit, Isabelle

AU - Brakhage, Axel A

AU - Braus, Gerhard H.

AU - Fischer, Reinhard

AU - Frisvad, Jens C.

AU - Goldman, Gustavo H.

AU - Houbraken, Jos

AU - Oakley, Berl R

AU - Pocsi, Istvan

AU - Scazzocchio, Claudio

AU - Seiboth, Bernhard

AU - vanKuyk, Patricia A

AU - Wortman, Jennifer Russo

AU - Dyer, Paul S

AU - Grigoriev, Igor V

PY - 2017/2/14

Y1 - 2017/2/14

KW - Aspergillus

KW - Genome sequencing

KW - Comparative genomics

KW - Fungal biology

U2 - 10.1186/s13059-017-1151-0

DO - 10.1186/s13059-017-1151-0

M3 - Article

SN - 1474-760X

VL - 18

JO - Genome Biology

JF - Genome Biology

ER -