GENOTRACE: cDNA-based local GENOme assembly from TRACE archives

TY - JOUR

T1 - GENOTRACE: cDNA-based local GENOme assembly from TRACE archives

AU - Berezikov, E.

AU - Plasterk, R.

AU - Cuppen, E.

N1 - Reporting year: 2002 Metis note: 12376385

PY - 2002

Y1 - 2002

N2 - GENOTRACE identifies the genomic organization for a cDNA using raw data from genome sequencing projects in progress (trace archives). Local genomic contigs are generated, allowing for example the design of PCR primers in intronic sequences to amplify coding regions of a gene, needed for example for mutation or SNP detection. AVAILABILITY: The package and examples of output files can be downloaded from http://rat.niob.knaw.nl/GENOTRACE

AB - GENOTRACE identifies the genomic organization for a cDNA using raw data from genome sequencing projects in progress (trace archives). Local genomic contigs are generated, allowing for example the design of PCR primers in intronic sequences to amplify coding regions of a gene, needed for example for mutation or SNP detection. AVAILABILITY: The package and examples of output files can be downloaded from http://rat.niob.knaw.nl/GENOTRACE

U2 - 10.1093/bioinformatics/18.10.1396

DO - 10.1093/bioinformatics/18.10.1396

M3 - Article

SN - 1367-4803

VL - 18

SP - 1396

EP - 1397

JO - Bioinformatics

JF - Bioinformatics

IS - 10

ER -