Harnessing soil feedback from resistant bananas to suppress pathogens in susceptible varieties

TY - JOUR

T1 - Harnessing soil feedback from resistant bananas to suppress pathogens in susceptible varieties

AU - Liu, Shanshan

AU - Tao, Chengyuan

AU - Xu, Xu

AU - Shen, Zongzhuan

AU - Kuramae, Eiko E.

AU - Wang, Zhe

AU - Li, Chunyu

AU - Li, Rong

AU - Shen, Qirong

AU - Kowalchuk, George A.

N1 - Publisher Copyright: © 2025 The Author(s). Journal of Applied Ecology © 2025 British Ecological Society.

PY - 2025/12/15

Y1 - 2025/12/15

N2 - Recent evidence shows that plants can recruit beneficial microbiomes that contribute substantially to disease resistance. However, it remains unclear whether resistant varieties can generate soil microbial legacies that persist beyond a single growing cycle and influence subsequent plant health. We tested this hypothesis using two banana varieties differing in resistance to Fusarium wilt to condition soils. These conditioned soils were then used to grow the two banana varieties to assess whether prior soil conditioning affected disease outcomes. We further analysed the microbial communities in the conditioned soils to identify key taxa associated with disease suppression. Cultivation-based approaches were also used to explore the pathogen inhibition potential of microbial populations that were enriched by the resistant banana variety. The soil legacy from the highly resistant variety positively influenced plant health, whereas the susceptible variety's soil led to pathogen enrichment. Microbial community analyses identified bacterial communities as being more responsive to feedback effects, while varietal differences more strongly influenced fungal communities. Beneficial microbes such as Dyella, Rhizobium and Sphingobium were enriched in the highly resistant variety's soil legacy, contributing to enhanced plant health. Synthesis and applications. Our findings highlight a nature-based strategy for improving plant health through the intentional use of resistant crop varieties to engineer beneficial soil microbiomes. This approach could enhance the sustainability and disease resilience of modified agricultural systems. By informing the design of crop rotation and soil management practices, our results demonstrate how ecological processes can be actively managed to promote long-term agroecosystem health.

AB - Recent evidence shows that plants can recruit beneficial microbiomes that contribute substantially to disease resistance. However, it remains unclear whether resistant varieties can generate soil microbial legacies that persist beyond a single growing cycle and influence subsequent plant health. We tested this hypothesis using two banana varieties differing in resistance to Fusarium wilt to condition soils. These conditioned soils were then used to grow the two banana varieties to assess whether prior soil conditioning affected disease outcomes. We further analysed the microbial communities in the conditioned soils to identify key taxa associated with disease suppression. Cultivation-based approaches were also used to explore the pathogen inhibition potential of microbial populations that were enriched by the resistant banana variety. The soil legacy from the highly resistant variety positively influenced plant health, whereas the susceptible variety's soil led to pathogen enrichment. Microbial community analyses identified bacterial communities as being more responsive to feedback effects, while varietal differences more strongly influenced fungal communities. Beneficial microbes such as Dyella, Rhizobium and Sphingobium were enriched in the highly resistant variety's soil legacy, contributing to enhanced plant health. Synthesis and applications. Our findings highlight a nature-based strategy for improving plant health through the intentional use of resistant crop varieties to engineer beneficial soil microbiomes. This approach could enhance the sustainability and disease resilience of modified agricultural systems. By informing the design of crop rotation and soil management practices, our results demonstrate how ecological processes can be actively managed to promote long-term agroecosystem health.

KW - crop rotation

KW - disease suppression

KW - Fusarium wilt disease

KW - plant–microbe interaction

KW - plant–soil feedback

KW - soil legacy

U2 - 10.1111/1365-2664.70245

DO - 10.1111/1365-2664.70245

M3 - Article

AN - SCOPUS:105024822011

SN - 0021-8901

JO - Journal of Applied Ecology

JF - Journal of Applied Ecology

ER -