MinION Sequencing of Yeast Mock Communities To Assess the Effect of Databases and ITS-LSU Markers on the Reliability of Metabarcoding Analysis

Angela Conti; Debora Casagrande Pierantoni; Vincent Robert; Laura Corte; Gianluigi Cardinali

doi:10.1128/spectrum.01052-22

MinION Sequencing of Yeast Mock Communities To Assess the Effect of Databases and ITS-LSU Markers on the Reliability of Metabarcoding Analysis

Angela Conti, Debora Casagrande Pierantoni, Vincent Robert, Laura Corte, Gianluigi Cardinali

Research output: Contribution to journal/periodical › Article › Scientific › peer-review

3 Citations (Scopus)

Original language	English
Journal	Microbiology spectrum
DOIs	https://doi.org/10.1128/spectrum.01052-22
Publication status	E-pub ahead of print - 15 Dec 2022

Keywords

MinION
Illumina
mock
species
yeast
LSU
ITS
metagenomic
database
delimitation
DNA sequencing
databases
metagenomics
yeasts

Access to Document

10.1128/spectrum.01052-22

Cite this

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title = "MinION Sequencing of Yeast Mock Communities To Assess the Effect of Databases and ITS-LSU Markers on the Reliability of Metabarcoding Analysis",

keywords = "MinION, Illumina, mock, species, yeast, LSU, ITS, metagenomic, database, delimitation, DNA sequencing, databases, metagenomics, yeasts",

author = "Angela Conti and Pierantoni, {Debora Casagrande} and Vincent Robert and Laura Corte and Gianluigi Cardinali",

year = "2022",

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doi = "10.1128/spectrum.01052-22",

language = "English",

journal = "Microbiology spectrum",

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AU - Conti, Angela

AU - Pierantoni, Debora Casagrande

AU - Robert, Vincent

AU - Corte, Laura

AU - Cardinali, Gianluigi

PY - 2022/12/15

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KW - MinION

KW - Illumina

KW - mock

KW - species

KW - yeast

KW - LSU

KW - ITS

KW - metagenomic

KW - database

KW - delimitation

KW - DNA sequencing

KW - databases

KW - metagenomics

KW - yeasts

U2 - 10.1128/spectrum.01052-22

DO - 10.1128/spectrum.01052-22

M3 - Article

SN - 2165-0497

JO - Microbiology spectrum

JF - Microbiology spectrum

ER -