Jos M. Raaijmakers

Zoekresultaten

• Genome-wide analysis of bacterial determinants of plant growth promotion and induced systemic resistance by Pseudomonas fluorescens

  Etalo, D. N. (Maker) & Raaijmakers, J. M. (Maker), NCBI, 26 aug. 2017

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA400211

  Dataset

• Data from: Molecular detection and quantification of the Striga seedbank in agricultural soils

  Benti, G. M. (Maker), Rybka, D. (Maker), Klein Gunnewiek, P. J. A. (Maker), Tessema, T. (Maker), Raaijmakers, J. M. (Maker) & Etalo, D. (Maker), Wiley-Blackwell, 29 apr. 2022

  DOI: 10.1111/wre.12535

  Dataset

• Exploring the native habitat and wild relatives of common bean (Phaseolus vulgaris) for ‘missing plant microbes’

  Perez Jaramillo, J. E. (Maker), De Hollander, M. (Maker), Ramirez, C. A. (Maker), Mendes, R. (Maker), Raaijmakers, J. M. (Maker) & Carrion Bravo, V. (Maker), European Nucleotide Archive (ENA), 23 okt. 2018

  https://www.ebi.ac.uk/ena/data/view/PRJEB26084

  Dataset

• Streptomyces recombinase A (recA) gene, partial cds.

  Cordovez da Cunha, V. (Maker), Carrion, V. J. (Maker), Etalo, D. N. (Maker), Mumm, R. (Maker), Zhu, H. (Maker), van Wezel, G. (Maker) & Raaijmakers, J. M. (Maker), NCBI, 04 nov. 2015

  https://www.ncbi.nlm.nih.gov/popset/944203303

  Dataset

• Bulk Soil Microbiome Raw sequence reads

  Abera Dinke, S. (Maker), Shimels, M. (Maker), Tessema, T. (Maker), Raaijmakers, J. M. (Maker) & Andreote, F. D. (Maker), NCBI, 21 mei 2022

  https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA841233

  Dataset

• Pseudomonas fluorescens 16S ribosomal RNA gene, partial sequence.

  Liu, Y. (Maker), Rzeszutek, E. (Maker), van der Voort, M. (Maker), Wu, C. H. (Maker), Thoen, E. (Maker), Skaar, I. (Maker), Bulone, V. (Maker), Dorrestein, P. C. (Maker), Raaijmakers, J. M. (Maker) & De Bruijn, I. (Maker), NCBI, 09 sep. 2015

  https://www.ncbi.nlm.nih.gov/popset/925170675

  Dataset

• Pseudomonas 16S ribosomal RNA gene, partial sequence.

  Liu, Y. (Maker), Rzeszutek, E. (Maker), van der Voort, M. (Maker), Wu, C. H. (Maker), Thoen, E. (Maker), Skaar, I. (Maker), Bulone, V. (Maker), Dorrestein, P. C. (Maker), Raaijmakers, J. M. (Maker) & De Bruijn, I. (Maker), NCBI, 09 sep. 2015

  https://www.ncbi.nlm.nih.gov/popset/925170686

  Dataset

• Streptomyces ATP synthase beta subunit (atpD) gene, partial cds.

  Cordovez da Cunha, V. (Maker), Carrion, V. J. (Maker), Etalo, D. N. (Maker), Mumm, R. (Maker), Zhu, H. (Maker), van Wezel, G. (Maker) & Raaijmakers, J. M. (Maker), NCBI, 04 nov. 2015

  https://www.ncbi.nlm.nih.gov/popset/944203324

  Dataset

• Transcriptome sequencing of Arabidopsis exposed to volatiles from Microbacterium sp. strain EC8

  Cordovez da Cunha, V. (Maker), Schop, S. (Maker), Hordijk, C. A. (Maker), Dupré de Boulois, H. (Maker), Coppens, F. (Maker), Hanssen, I. (Maker), Raaijmakers, J. M. (Maker) & Carrión, V. J. (Maker), NCBI, 24 sep. 2018

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA492842

  Dataset

• Transcriptome sequencing of Arabidopsis exposed to fungal volatiles

  Cordovez da Cunha, V. (Maker), Moisan, K. (Maker), Carrion, V. J. (Maker) & Raaijmakers, J. M. (Maker), NCBI, 03 jul. 2017

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA392864

  Dataset

• data from: Extracting the GEMs: Genotype, Environment and Microbiome interactions shaping host phenotypes

  Oyserman, B. (Maker), Cordovez da Cunha, V. (Maker), Sarango Flores, S. W. (Maker), Nijveen, H. (Maker), Medema, M. H. (Maker) & Raaijmakers, J. M. (Maker), Frontiers Media SA, 12 jan. 2021

  https://www.frontiersin.org/articles/10.3389/fmicb.2020.574053/full#S10

  Dataset

• Data from: Fungal volatiles influence plant defence against aboveground and belowground herbivory

  Moisan, K. (Maker), Aragón, M. (Maker), Gort, G. (Maker), Dicke, M. (Maker), Cordovez da Cunha, V. (Maker), Raaijmakers, J. M. (Maker) & Lucas-Barbosa, D. (Maker), Dryad, 31 jul. 2020

  DOI: 10.5061/dryad.d2547d816

  Dataset

• metatranscriptome data from: Impact of the fungal pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root microbiome

  Mendes, L. W. (Maker), Raaijmakers, J. M. (Maker), De Hollander, M. (Maker), Sepo, E. (Maker), Gomez Exposito, R. (Maker), Chiorato, A. F. (Maker), Mendes, R. (Maker), Tsai, S. M. (Maker) & Carrion Bravo, V. (Maker), NCBI, 22 nov. 2022

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA904281

  Dataset

• metagenome data from: Impact of the fungal pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root microbiome

  Mendes, L. W. (Maker), Raaijmakers, J. M. (Maker), De Hollander, M. (Maker), Sepo, E. (Maker), Gomez Exposito, R. (Maker), Chiorato, A. F. (Maker), Mendes, R. (Maker), Tsai, S. M. (Maker) & Carrion Bravo, V. (Maker), NCBI, 22 nov. 2022

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA904562

  Dataset

• 16S data from: Impact of the fungal pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root microbiome

  Mendes, L. W. (Maker), Raaijmakers, J. M. (Maker), De Hollander, M. (Maker), Sepo, E. (Maker), Gomez Exposito, R. (Maker), Chiorato, A. F. (Maker), Mendes, R. (Maker), Tsai, S. M. (Maker) & Carrion Bravo, V. (Maker), NCBI, 22 nov. 2022

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA904225

  Dataset

• Disentangling the genetic basis of rhizosphere microbiome assembly in tomato

  Oyserman, B. (Maker), Sarango Flores, S. W. (Maker), Griffioen, T. (Maker), Pan, X. (Maker), van der Wijk, E. (Maker), Pronk, L. (Maker), Lokhorst, W. (Maker), Nurfikari, A. (Maker), Paulson, J. N. (Maker), Movassagh, M. (Maker), Stopnisek, N. (Maker), Kupczok, A. (Maker), Cordovez da Cunha, V. (Maker), Carrion Bravo, V. (Maker), Ligterink, W. (Maker), Snoek, B. (Maker), Medema, M. H. (Maker) & Raaijmakers, J. M. (Maker), European Nucleotide Archive (ENA), 02 mrt. 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJNA787039

  Dataset

• Sorghum rhizosphere microbiome Raw sequence reads

  Abera Dinke, S. (Maker), Shimels, M. (Maker), Tessema, T. (Maker), Raaijmakers, J. M. (Maker) & Andreote, F. D. (Maker), NCBI, 21 mei 2022

  https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA841234

  Dataset

• Impact of domestication of common bean on rhizobacterial community assembly

  Perez, J. E. (Maker), Carrion, V. J. (Maker), Bosse, M. (Maker), Ferrão, L. F. V. (Maker), De Hollander, M. (Maker), Garcia, A. A. F. (Maker), Ramirez, C. A. (Maker), Mendez, R. (Maker) & Raaijmakers, J. M. (Maker), European Nucleotide Archive (ENA), 15 feb. 2017

  https://www.ebi.ac.uk/ena/data/view/PRJEB19467

  Dataset

• Fungi internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.

  Liu, Y. (Maker), Zachow, C. (Maker), Raaijmakers, J. M. (Maker) & De Bruijn, I. (Maker), NCBI, 03 feb. 2016

  https://www.ncbi.nlm.nih.gov/popset/984291244

  Dataset

• Data from: Microbial and volatile profiling of soils suppressive to Fusarium culmorum of wheat

  Ossowicki, A. (Maker), Tracanna, V. (Maker), Petrus, M. L. C. (Maker), van Wezel, G. (Maker), Raaijmakers, J. M. (Maker), Medema, M. H. (Maker) & Garbeva, P. (Maker), Dryad, 27 feb. 2020

  DOI: 10.5061/dryad.g884q70

  Dataset

• Streptomyces 16S ribosomal RNA gene, partial sequence.

  Cordovez da Cunha, V. (Maker), Carrion, V. J. (Maker), Etalo, D. N. (Maker), Mumm, R. (Maker), Zhu, H. (Maker), van Wezel, G. (Maker) & Raaijmakers, J. M. (Maker), NCBI, 04 nov. 2015

  https://www.ncbi.nlm.nih.gov/popset/944203292

  Dataset

• Rhizosphere microbiome of wild and modern tomato

  Cordovez da Cunha, V. (Maker), Rotoni, C. (Maker), Dini-Andreote, F. (Maker), Oyserman, B. (Maker), Carrion Bravo, V. (Maker) & Raaijmakers, J. M. (Maker), NCBI, 31 jan. 2021

  https://www.ncbi.nlm.nih.gov/bioproject/PRJEB40313

  Dataset

• Identification of volatiles released from roots of wild and do-mesticated tomato plants under insect attack

  Lee Diaz, A. S. (Maker), Rizaludin, M. S. (Maker), Zweers, H. (Maker), Raaijmakers, J. M. (Maker) & Garbeva, P. (Maker), Zenodo, 17 dec. 2021

  DOI: 10.5281/zenodo.5788930.svg

  Dataset

• Data from: Genetic, phenotypic and metabolic diversity of yeasts from wheat flag leaves

  Gouka, L. (Maker), Vogels, C. (Maker), Hestbjerg Hansen, L. (Maker), Raaijmakers, J. M. (Maker) & Cordovez da Cunha, V. (Maker), European Nucleotide Archive (ENA), 17 jun. 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB51687

  Dataset

• Disentangling the genetic basis of rhizosphere microbiome assembly in tomato (metagenomics part)

  Oyserman, B. (Maker), Sarango Flores, S. W. (Maker), Griffioen, T. (Maker), Pan, X. (Maker), van der Wijk, E. (Maker), Pronk, L. (Maker), Lokhorst, W. (Maker), Nurfikari, A. (Maker), Paulson, J. N. (Maker), Movassagh, M. (Maker), Stopnisek, N. (Maker), Kupczok, A. (Maker), Cordovez da Cunha, V. (Maker), Carrion Bravo, V. (Maker), Ligterink, W. (Maker), Snoek, B. (Maker), Medema, M. H. (Maker) & Raaijmakers, J. M. (Maker), European Nucleotide Archive (ENA), 02 mrt. 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJNA789467

  Dataset