Fungal taxonomy and sequence-based nomenclature

Robert Lücking; M Catherine Aime; Barbara Robbertse; Andrew N Miller; Takayuki Aoki; Hiran A Ariyawansa; Gianluigi Cardinali; Pedro W Crous; Irina S Druzhinina; David M Geiser; David L Hawksworth; Kevin D Hyde; Laszlo Irinyi; Rajesh Jeewon; Peter R Johnston; Paul M Kirk; Elaine Malosso; Tom W May; Wieland Meyer; Henrik R Nilsson; Maarja Öpik; Vincent Robert; Marc Stadler; Marco Thines; Duong Vu; Andrey M Yurkov; Ning Zhang; Conrad L Schoch

doi:10.1038/s41564-021-00888-x

Fungal taxonomy and sequence-based nomenclature

Robert Lücking, M Catherine Aime, Barbara Robbertse, Andrew N Miller, Takayuki Aoki, Hiran A Ariyawansa, Gianluigi Cardinali, Pedro W Crous, Irina S Druzhinina, David M Geiser, David L Hawksworth, Kevin D Hyde, Laszlo Irinyi, Rajesh Jeewon, Peter R Johnston, Paul M Kirk, Elaine Malosso, Tom W May, Wieland Meyer, Henrik R NilssonMaarja Öpik, Vincent Robert, Marc Stadler, Marco Thines, Duong Vu, Andrey M Yurkov, Ning Zhang, Conrad L Schoch

Onderzoeksoutput: Bijdrage aan wetenschappelijk tijdschrift/periodieke uitgave › Boek/film/artikelrecensie › Wetenschappelijk

124 Citaten (Scopus)

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The identification and proper naming of microfungi, in particular plant, animal and human pathogens, remains challenging. Molecular identification is becoming the default approach for many fungal groups, and environmental metabarcoding is contributing an increasing amount of sequence data documenting fungal diversity on a global scale. This includes lineages represented only by sequence data. At present, these taxa cannot be formally described under the current nomenclature rules. By considering approaches used in bacterial taxonomy, we propose solutions for the nomenclature of taxa known only from sequences to facilitate consistent reporting and communication in the literature and public sequence repositories.

Originele taal-2	Engels
Pagina's (van-tot)	540–548
Tijdschrift	Nature Microbiology
Volume	6
DOI's	https://doi.org/10.1038/s41564-021-00888-x
Status	Gepubliceerd - mei 2021

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Lücking, R., Aime, M. C., Robbertse, B., Miller, A. N., Aoki, T., Ariyawansa, H. A., Cardinali, G., Crous, P. W., Druzhinina, I. S., Geiser, D. M., Hawksworth, D. L., Hyde, K. D., Irinyi, L., Jeewon, R., Johnston, P. R., Kirk, P. M., Malosso, E., May, T. W., Meyer, W., ... Schoch, C. L. (2021). Fungal taxonomy and sequence-based nomenclature. Nature Microbiology, 6, 540–548. https://doi.org/10.1038/s41564-021-00888-x

@article{4cc5120aee094d78bb516d202defa2d4,

title = "Fungal taxonomy and sequence-based nomenclature",

abstract = "The identification and proper naming of microfungi, in particular plant, animal and human pathogens, remains challenging. Molecular identification is becoming the default approach for many fungal groups, and environmental metabarcoding is contributing an increasing amount of sequence data documenting fungal diversity on a global scale. This includes lineages represented only by sequence data. At present, these taxa cannot be formally described under the current nomenclature rules. By considering approaches used in bacterial taxonomy, we propose solutions for the nomenclature of taxa known only from sequences to facilitate consistent reporting and communication in the literature and public sequence repositories.",

author = "Robert L{\"u}cking and Aime, {M Catherine} and Barbara Robbertse and Miller, {Andrew N} and Takayuki Aoki and Ariyawansa, {Hiran A} and Gianluigi Cardinali and Crous, {Pedro W} and Druzhinina, {Irina S} and Geiser, {David M} and Hawksworth, {David L} and Hyde, {Kevin D} and Laszlo Irinyi and Rajesh Jeewon and Johnston, {Peter R} and Kirk, {Paul M} and Elaine Malosso and May, {Tom W} and Wieland Meyer and Nilsson, {Henrik R} and Maarja {\"O}pik and Vincent Robert and Marc Stadler and Marco Thines and Duong Vu and Yurkov, {Andrey M} and Ning Zhang and Schoch, {Conrad L}",

year = "2021",

month = may,

doi = "10.1038/s41564-021-00888-x",

language = "English",

volume = "6",

pages = "540–548",

journal = "Nature Microbiology",

issn = "2058-5276",

publisher = "Nature Publishing Group",

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Lücking, R, Aime, MC, Robbertse, B, Miller, AN, Aoki, T, Ariyawansa, HA, Cardinali, G, Crous, PW, Druzhinina, IS, Geiser, DM, Hawksworth, DL, Hyde, KD, Irinyi, L, Jeewon, R, Johnston, PR, Kirk, PM, Malosso, E, May, TW, Meyer, W, Nilsson, HR, Öpik, M, Robert, V, Stadler, M, Thines, M, Vu, D, Yurkov, AM, Zhang, N & Schoch, CL 2021, 'Fungal taxonomy and sequence-based nomenclature', Nature Microbiology, vol. 6, blz. 540–548. https://doi.org/10.1038/s41564-021-00888-x

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T1 - Fungal taxonomy and sequence-based nomenclature

AU - Lücking, Robert

AU - Aime, M Catherine

AU - Robbertse, Barbara

AU - Miller, Andrew N

AU - Aoki, Takayuki

AU - Ariyawansa, Hiran A

AU - Cardinali, Gianluigi

AU - Crous, Pedro W

AU - Druzhinina, Irina S

AU - Geiser, David M

AU - Hawksworth, David L

AU - Hyde, Kevin D

AU - Irinyi, Laszlo

AU - Jeewon, Rajesh

AU - Johnston, Peter R

AU - Kirk, Paul M

AU - Malosso, Elaine

AU - May, Tom W

AU - Meyer, Wieland

AU - Nilsson, Henrik R

AU - Öpik, Maarja

AU - Robert, Vincent

AU - Stadler, Marc

AU - Thines, Marco

AU - Vu, Duong

AU - Yurkov, Andrey M

AU - Zhang, Ning

AU - Schoch, Conrad L

PY - 2021/5

Y1 - 2021/5

N2 - The identification and proper naming of microfungi, in particular plant, animal and human pathogens, remains challenging. Molecular identification is becoming the default approach for many fungal groups, and environmental metabarcoding is contributing an increasing amount of sequence data documenting fungal diversity on a global scale. This includes lineages represented only by sequence data. At present, these taxa cannot be formally described under the current nomenclature rules. By considering approaches used in bacterial taxonomy, we propose solutions for the nomenclature of taxa known only from sequences to facilitate consistent reporting and communication in the literature and public sequence repositories.

AB - The identification and proper naming of microfungi, in particular plant, animal and human pathogens, remains challenging. Molecular identification is becoming the default approach for many fungal groups, and environmental metabarcoding is contributing an increasing amount of sequence data documenting fungal diversity on a global scale. This includes lineages represented only by sequence data. At present, these taxa cannot be formally described under the current nomenclature rules. By considering approaches used in bacterial taxonomy, we propose solutions for the nomenclature of taxa known only from sequences to facilitate consistent reporting and communication in the literature and public sequence repositories.

U2 - 10.1038/s41564-021-00888-x

DO - 10.1038/s41564-021-00888-x

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Fungal taxonomy and sequence-based nomenclature

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