Importance of Bacteroidetes in host–microbe interactions and ecosystem functioning

Xinya Pan; Jos M. Raaijmakers; Víctor J. Carrión

doi:10.1016/j.tim.2023.03.018

Importance of Bacteroidetes in host–microbe interactions and ecosystem functioning

Xinya Pan, Jos M. Raaijmakers, Víctor J. Carrión^* (Co-auteur)

^*Bijbehorende auteur voor dit werk

NIOO - Microbial Ecology (ME)

Onderzoeksoutput: Bijdrage aan wetenschappelijk tijdschrift/periodieke uitgave › Artikel › Wetenschappelijk › peer review

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Bacteroidetes are prevalent in soil ecosystems and are associated with various eukaryotic hosts, including plants, animals, and humans. The ubiquity and diversity of Bacteroidetes exemplify their impressive versatility in niche adaptation and genomic plasticity. Over the past decade, a wealth of knowledge has been obtained on the metabolic functions of clinically relevant Bacteroidetes, but much less attention has been given to Bacteroidetes living in close association with plants. To improve our understanding of the functional roles of Bacteroidetes for plants and other hosts, we review the current knowledge of their taxonomy and ecology, in particular their roles in nutrient cycling and host fitness. We highlight their environmental distribution, stress resilience, genomic diversity, and functional importance in diverse ecosystems, including, but not limited to, plant-associated microbiomes.

Originele taal-2	Engels
Pagina's (van-tot)	959-971
Aantal pagina's	13
Tijdschrift	Trends in Microbiology
Volume	31
Nummer van het tijdschrift	9
DOI's	https://doi.org/10.1016/j.tim.2023.03.018
Status	Gepubliceerd - 01 mei 2023

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10.1016/j.tim.2023.03.018

Pan et al 2023 AAMAccepted author manuscript, 1,39 MBLicentie: CC BY-NC-ND
Pan et al 2023Final published version, 1,71 MBLicentie: Taverne

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title = "Importance of Bacteroidetes in host–microbe interactions and ecosystem functioning",

abstract = "Bacteroidetes are prevalent in soil ecosystems and are associated with various eukaryotic hosts, including plants, animals, and humans. The ubiquity and diversity of Bacteroidetes exemplify their impressive versatility in niche adaptation and genomic plasticity. Over the past decade, a wealth of knowledge has been obtained on the metabolic functions of clinically relevant Bacteroidetes, but much less attention has been given to Bacteroidetes living in close association with plants. To improve our understanding of the functional roles of Bacteroidetes for plants and other hosts, we review the current knowledge of their taxonomy and ecology, in particular their roles in nutrient cycling and host fitness. We highlight their environmental distribution, stress resilience, genomic diversity, and functional importance in diverse ecosystems, including, but not limited to, plant-associated microbiomes.",

keywords = "human gut, (meta)genomics, plant–microbe interactions, algal blooms, microbiome assembly and functioning, biogeochemical cycling, niche adaptation",

author = "Xinya Pan and Raaijmakers, {Jos M.} and Carri{\'o}n, {V{\'i}ctor J.}",

note = "Data archiving: no NIOO data",

year = "2023",

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doi = "10.1016/j.tim.2023.03.018",

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AU - Pan, Xinya

AU - Raaijmakers, Jos M.

AU - Carrión, Víctor J.

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PY - 2023/5/1

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AB - Bacteroidetes are prevalent in soil ecosystems and are associated with various eukaryotic hosts, including plants, animals, and humans. The ubiquity and diversity of Bacteroidetes exemplify their impressive versatility in niche adaptation and genomic plasticity. Over the past decade, a wealth of knowledge has been obtained on the metabolic functions of clinically relevant Bacteroidetes, but much less attention has been given to Bacteroidetes living in close association with plants. To improve our understanding of the functional roles of Bacteroidetes for plants and other hosts, we review the current knowledge of their taxonomy and ecology, in particular their roles in nutrient cycling and host fitness. We highlight their environmental distribution, stress resilience, genomic diversity, and functional importance in diverse ecosystems, including, but not limited to, plant-associated microbiomes.

KW - human gut

KW - (meta)genomics

KW - plant–microbe interactions

KW - algal blooms

KW - microbiome assembly and functioning

KW - biogeochemical cycling

KW - niche adaptation

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DO - 10.1016/j.tim.2023.03.018

M3 - Article

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JO - Trends in Microbiology

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Importance of Bacteroidetes in host–microbe interactions and ecosystem functioning

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