The promise of community-driven preprints in ecology and evolution

Daniel W.A. Noble; Zoe A. Xirocostas; Nicholas C. Wu; April Robin Martinig; Rafaela A. Almeida; Kevin R. Bairos-Novak; Heikel Balti; Michael G. Bertram; Louis Bliard; Jack A. Brand; Ilha Byrne; Ying Chi Chan; Dena Jane Clink; Quentin Corbel; Ricardo A. Correia; Jordann Crawford-Ash; Antica Culina; Elvira D'bastiani; Gideon G. Deme; Melina De Souza Leite; Félicie Dhellemmes; Shreya Dimri; Szymek M. Drobniak; Alexander D. Elsy; Susan E. Everingham; Samuel J.L. Gascoigne; Matthew J. Grainger; Gavin C. Hossack; Knut Anders Hovstad; Edward R. Ivimey-Cook; Matt Lloyd Jones; Ineta Kačergytė; Georg Küstner; Dalton C. Leibold; Magdalena M. Mair; Jake Martin; Ayumi Mizuno; Iain R. Moodie; David Moreau; Rose E. O'dea; James A. Orr; Matthieu Paquet; Rabindra Parajuli; Joel L. Pick; Patrice Pottier; Marija Purgar; Pablo Recio; Dominique G. Roche; Raphaël Royauté; Saeed Shafiei Sabet; Julio M.G. Segovia; Inês Silva; Alfredo Sánchez-Tójar; Bruno E. Soares; Birgit Szabo; Elina Takola; Eli S.J. Thoré; Bishnu Timilsina; Natalie E. Van Dis; Wilco C.E.P. Verberk; Stefan J.G. Vriend; Kristoffer H. Wild; Coralie Williams; Yefeng Yang; Shinichi Nakagawa; Malgorzata Lagisz

doi:10.1098/rspb.2024.1487

The promise of community-driven preprints in ecology and evolution

Daniel W.A. Noble^* (Co-auteur), Zoe A. Xirocostas, Nicholas C. Wu, April Robin Martinig, Rafaela A. Almeida, Kevin R. Bairos-Novak, Heikel Balti, Michael G. Bertram, Louis Bliard, Jack A. Brand, Ilha Byrne, Ying Chi Chan, Dena Jane Clink, Quentin Corbel, Ricardo A. Correia, Jordann Crawford-Ash, Antica Culina, Elvira D'bastiani, Gideon G. Deme, Melina De Souza LeiteFélicie Dhellemmes, Shreya Dimri, Szymek M. Drobniak, Alexander D. Elsy, Susan E. Everingham, Samuel J.L. Gascoigne, Matthew J. Grainger, Gavin C. Hossack, Knut Anders Hovstad, Edward R. Ivimey-Cook, Matt Lloyd Jones, Ineta Kačergytė, Georg Küstner, Dalton C. Leibold, Magdalena M. Mair, Jake Martin, Ayumi Mizuno, Iain R. Moodie, David Moreau, Rose E. O'dea, James A. Orr, Matthieu Paquet, Rabindra Parajuli, Joel L. Pick, Patrice Pottier, Marija Purgar, Pablo Recio, Dominique G. Roche, Raphaël Royauté, Saeed Shafiei Sabet, Julio M.G. Segovia, Inês Silva, Alfredo Sánchez-Tójar, Bruno E. Soares, Birgit Szabo, Elina Takola, Eli S.J. Thoré, Bishnu Timilsina, Natalie E. Van Dis, Wilco C.E.P. Verberk, Stefan J.G. Vriend, Kristoffer H. Wild, Coralie Williams, Yefeng Yang, Shinichi Nakagawa, Malgorzata Lagisz

^*Corresponding author voor dit werk

NIOO - Aquatic Ecology (AqE)

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2 Citaten (Scopus)

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Publishing preprints is quickly becoming commonplace in ecology and evolutionary biology. Preprints can facilitate the rapid sharing of scientific knowledge establishing precedence and enabling feedback from the research community before peer review. Yet, significant barriers to preprint use exist, including language barriers, a lack of understanding about the benefits of preprints and a lack of diversity in the types of research outputs accepted (e.g. reports). Community-driven preprint initiatives can allow a research community to come together to break down these barriers to improve equity and coverage of global knowledge. Here, we explore the first preprints uploaded to EcoEvoRxiv (n = 1216), a community-driven preprint server for ecologists and evolutionary biologists, to characterize preprint use in ecology, evolution and conservation. Our perspective piece highlights some of the unique initiatives that EcoEvoRxiv has taken to break down barriers to scientific publishing by exploring the composition of articles, how gender and career stage influence preprint use, whether preprints are associated with greater open science practices (e.g. code and data sharing) and tracking preprint publication outcomes. Our analysis identifies areas that we still need to improve upon but highlights how community-driven initiatives, such as EcoEvoRxiv, can play a crucial role in shaping publishing practices in biology.

Originele taal-2	Engels
Artikelnummer	20241487
Tijdschrift	Proceedings of the Royal Society B: Biological Sciences
Volume	292
Nummer van het tijdschrift	2039
DOI's	https://doi.org/10.1098/rspb.2024.1487
Status	Gepubliceerd - 29 jan. 2025

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10.1098/rspb.2024.1487

Noble et al 2025Final published version, 984 KBLicentie: Taverne

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code from: The promise of community-driven preprints in ecology and evolution
Noble, D. W. A. (Ontwikkelaar), Xirocostas, Z. A. (Ontwikkelaar), Wu, N. C. (Ontwikkelaar), Martinig, A. R. (Ontwikkelaar), Alao de Almeida, R. (Ontwikkelaar), Bairos-Novak, K. R. (Ontwikkelaar), Balti, H. (Ontwikkelaar), Bertram, M. G. (Ontwikkelaar), Bliard, L. (Ontwikkelaar), Brand, J. A. (Ontwikkelaar), Byrne, I. (Ontwikkelaar), Chan, Y.-C. (Ontwikkelaar), Clink, D. J. (Ontwikkelaar), Corbel, Q. (Ontwikkelaar), Correia, R. A. (Ontwikkelaar), Crawford-Ash, J. (Ontwikkelaar), Culina, A. (Ontwikkelaar), D'Bastiani, E. (Ontwikkelaar), Deme, G. G. (Ontwikkelaar) & De Souza Leite, M. (Ontwikkelaar) & 46 anderen, Dhellemmes, F. (Ontwikkelaar), Dimri, S. (Ontwikkelaar), Drobniak, S. M. (Ontwikkelaar), Elsy, A. D. (Ontwikkelaar), Everingham, S. E. (Ontwikkelaar), Gascoigne, S. J. L. (Ontwikkelaar), Grainger, M. (Ontwikkelaar), Hossack, G. C. (Ontwikkelaar), Hovstad, K. A. (Ontwikkelaar), Ivimey-Cook, E. R. (Ontwikkelaar), Lloyd Jones, M. (Ontwikkelaar), Kačergytė, I. (Ontwikkelaar), Küstner, G. (Ontwikkelaar), Leibold, D. C. (Ontwikkelaar), Mair, M. (Ontwikkelaar), Martin, J. (Ontwikkelaar), Mizuno, A. (Ontwikkelaar), Moodie, I. (Ontwikkelaar), Moreau, D. (Ontwikkelaar), O’Dea, R. E. (Ontwikkelaar), Orr, J. A. (Ontwikkelaar), Paquet, M. (Ontwikkelaar), Parajuli, R. (Ontwikkelaar), Pick, J. L. (Ontwikkelaar), Pottier, P. (Ontwikkelaar), Purgar, M. (Ontwikkelaar), Recio, P. (Ontwikkelaar), Roche, D. G. (Ontwikkelaar), Royauté, R. (Ontwikkelaar), Shafiei Sabet, S. (Ontwikkelaar), Segovia, J. M. G. (Ontwikkelaar), Silva, I. (Ontwikkelaar), Sánchez-Tójar, A. (Ontwikkelaar), Soares, B. E. (Ontwikkelaar), Szabo, B. (Ontwikkelaar), Takola, E. (Ontwikkelaar), Thoré, E. S. J. (Ontwikkelaar), Timilsina, B. (Ontwikkelaar), van Dis, N. E. (Ontwikkelaar), Verberk, W. C. E. P. (Ontwikkelaar), Vriend, S. J. G. (Ontwikkelaar), Wild, K. H. (Ontwikkelaar), Williams, C. (Ontwikkelaar), Yang, Y. (Ontwikkelaar), Nakagawa, S. (Ontwikkelaar) & Lagisz, M. (Ontwikkelaar), 20 dec. 2024
Onderzoeksoutput: Niet-tekstuele vorm › Software › Wetenschappelijk

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The promise of community-driven preprints in ecology and evolution
Noble, D., Xirocostas, Z., Wu, N., Martinig, A., Almeida, R., Bairos-Novak, K., Balti, H., Bertram, M., Bliard, L., Brand, J., Byrne, I., Chan, Y.-C., Clink, D., Corbel, Q., Correia, R., Crawford-Ash, J., Culina, A., D’Bastiani, E., Gywa, G. & Leite, M. & 30 anderen, Dhellemmes, F., Dimri, S., Drobniak, S., Elsy, A., Everingham, S., Gascoigne, S., Grainger, M., Hossack, G., Hovstad, K., Ivimey-Cook, E. R., Lloyd Jones, M., Kačergytė, I., Küstner, G., Leibold, D., Mair, M., Martin, J., Mizuno, A., Moodie, I., Moreau, D., O’Dea, R., Orr, J., Paquet, M., Parajuli, R., Pick, J., Pottier, P., Purgar, M., Recio, P., Roche, D., van Dis, N. & Vriend, S., 13 jun. 2024.
Onderzoeksoutput: Working paper/discussiepaper › Voordruk

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Citeer dit

Noble, D. W. A., Xirocostas, Z. A., Wu, N. C., Martinig, A. R., Almeida, R. A., Bairos-Novak, K. R., Balti, H., Bertram, M. G., Bliard, L., Brand, J. A., Byrne, I., Chan, Y. C., Clink, D. J., Corbel, Q., Correia, R. A., Crawford-Ash, J., Culina, A., D'bastiani, E., Deme, G. G., ... Lagisz, M. (2025). The promise of community-driven preprints in ecology and evolution. Proceedings of the Royal Society B: Biological Sciences, 292(2039), Artikel 20241487. https://doi.org/10.1098/rspb.2024.1487

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title = "The promise of community-driven preprints in ecology and evolution",

abstract = "Publishing preprints is quickly becoming commonplace in ecology and evolutionary biology. Preprints can facilitate the rapid sharing of scientific knowledge establishing precedence and enabling feedback from the research community before peer review. Yet, significant barriers to preprint use exist, including language barriers, a lack of understanding about the benefits of preprints and a lack of diversity in the types of research outputs accepted (e.g. reports). Community-driven preprint initiatives can allow a research community to come together to break down these barriers to improve equity and coverage of global knowledge. Here, we explore the first preprints uploaded to EcoEvoRxiv (n = 1216), a community-driven preprint server for ecologists and evolutionary biologists, to characterize preprint use in ecology, evolution and conservation. Our perspective piece highlights some of the unique initiatives that EcoEvoRxiv has taken to break down barriers to scientific publishing by exploring the composition of articles, how gender and career stage influence preprint use, whether preprints are associated with greater open science practices (e.g. code and data sharing) and tracking preprint publication outcomes. Our analysis identifies areas that we still need to improve upon but highlights how community-driven initiatives, such as EcoEvoRxiv, can play a crucial role in shaping publishing practices in biology.",

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author = "Noble, {Daniel W.A.} and Xirocostas, {Zoe A.} and Wu, {Nicholas C.} and Martinig, {April Robin} and Almeida, {Rafaela A.} and Bairos-Novak, {Kevin R.} and Heikel Balti and Bertram, {Michael G.} and Louis Bliard and Brand, {Jack A.} and Ilha Byrne and Chan, {Ying Chi} and Clink, {Dena Jane} and Quentin Corbel and Correia, {Ricardo A.} and Jordann Crawford-Ash and Antica Culina and Elvira D'bastiani and Deme, {Gideon G.} and {De Souza Leite}, Melina and F{\'e}licie Dhellemmes and Shreya Dimri and Drobniak, {Szymek M.} and Elsy, {Alexander D.} and Everingham, {Susan E.} and Gascoigne, {Samuel J.L.} and Grainger, {Matthew J.} and Hossack, {Gavin C.} and Hovstad, {Knut Anders} and Ivimey-Cook, {Edward R.} and Jones, {Matt Lloyd} and Ineta Ka{\v c}ergytė and Georg K{\"u}stner and Leibold, {Dalton C.} and Mair, {Magdalena M.} and Jake Martin and Ayumi Mizuno and Moodie, {Iain R.} and David Moreau and O'dea, {Rose E.} and Orr, {James A.} and Matthieu Paquet and Rabindra Parajuli and Pick, {Joel L.} and Patrice Pottier and Marija Purgar and Pablo Recio and Roche, {Dominique G.} and Rapha{\"e}l Royaut{\'e} and {Shafiei Sabet}, Saeed and Segovia, {Julio M.G.} and In{\^e}s Silva and Alfredo S{\'a}nchez-T{\'o}jar and Soares, {Bruno E.} and Birgit Szabo and Elina Takola and Thor{\'e}, {Eli S.J.} and Bishnu Timilsina and {Van Dis}, {Natalie E.} and Verberk, {Wilco C.E.P.} and Vriend, {Stefan J.G.} and Wild, {Kristoffer H.} and Coralie Williams and Yefeng Yang and Shinichi Nakagawa and Malgorzata Lagisz",

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doi = "10.1098/rspb.2024.1487",

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Noble, DWA, Xirocostas, ZA, Wu, NC, Martinig, AR, Almeida, RA, Bairos-Novak, KR, Balti, H, Bertram, MG, Bliard, L, Brand, JA, Byrne, I, Chan, YC, Clink, DJ, Corbel, Q, Correia, RA, Crawford-Ash, J, Culina, A, D'bastiani, E, Deme, GG, De Souza Leite, M, Dhellemmes, F, Dimri, S, Drobniak, SM, Elsy, AD, Everingham, SE, Gascoigne, SJL, Grainger, MJ, Hossack, GC, Hovstad, KA, Ivimey-Cook, ER, Jones, ML, Kačergytė, I, Küstner, G, Leibold, DC, Mair, MM, Martin, J, Mizuno, A, Moodie, IR, Moreau, D, O'dea, RE, Orr, JA, Paquet, M, Parajuli, R, Pick, JL, Pottier, P, Purgar, M, Recio, P, Roche, DG, Royauté, R, Shafiei Sabet, S, Segovia, JMG, Silva, I, Sánchez-Tójar, A, Soares, BE, Szabo, B, Takola, E, Thoré, ESJ, Timilsina, B, Van Dis, NE, Verberk, WCEP, Vriend, SJG, Wild, KH, Williams, C, Yang, Y, Nakagawa, S & Lagisz, M 2025, 'The promise of community-driven preprints in ecology and evolution', Proceedings of the Royal Society B: Biological Sciences, vol. 292, nr. 2039, 20241487. https://doi.org/10.1098/rspb.2024.1487

The promise of community-driven preprints in ecology and evolution. / Noble, Daniel W.A. (Co-auteur); Xirocostas, Zoe A.; Wu, Nicholas C. et al.
In: Proceedings of the Royal Society B: Biological Sciences, Vol. 292, Nr. 2039, 20241487, 29.01.2025.

Onderzoeksoutput: Bijdrage aan wetenschappelijk tijdschrift/periodieke uitgave › Artikel › Wetenschappelijk › peer review

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AU - Xirocostas, Zoe A.

AU - Wu, Nicholas C.

AU - Martinig, April Robin

AU - Almeida, Rafaela A.

AU - Bairos-Novak, Kevin R.

AU - Balti, Heikel

AU - Bertram, Michael G.

AU - Bliard, Louis

AU - Brand, Jack A.

AU - Byrne, Ilha

AU - Chan, Ying Chi

AU - Clink, Dena Jane

AU - Corbel, Quentin

AU - Correia, Ricardo A.

AU - Crawford-Ash, Jordann

AU - Culina, Antica

AU - D'bastiani, Elvira

AU - Deme, Gideon G.

AU - De Souza Leite, Melina

AU - Dhellemmes, Félicie

AU - Dimri, Shreya

AU - Drobniak, Szymek M.

AU - Elsy, Alexander D.

AU - Everingham, Susan E.

AU - Gascoigne, Samuel J.L.

AU - Grainger, Matthew J.

AU - Hossack, Gavin C.

AU - Hovstad, Knut Anders

AU - Ivimey-Cook, Edward R.

AU - Jones, Matt Lloyd

AU - Kačergytė, Ineta

AU - Küstner, Georg

AU - Leibold, Dalton C.

AU - Mair, Magdalena M.

AU - Martin, Jake

AU - Mizuno, Ayumi

AU - Moodie, Iain R.

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AU - O'dea, Rose E.

AU - Orr, James A.

AU - Paquet, Matthieu

AU - Parajuli, Rabindra

AU - Pick, Joel L.

AU - Pottier, Patrice

AU - Purgar, Marija

AU - Recio, Pablo

AU - Roche, Dominique G.

AU - Royauté, Raphaël

AU - Shafiei Sabet, Saeed

AU - Segovia, Julio M.G.

AU - Silva, Inês

AU - Sánchez-Tójar, Alfredo

AU - Soares, Bruno E.

AU - Szabo, Birgit

AU - Takola, Elina

AU - Thoré, Eli S.J.

AU - Timilsina, Bishnu

AU - Van Dis, Natalie E.

AU - Verberk, Wilco C.E.P.

AU - Vriend, Stefan J.G.

AU - Wild, Kristoffer H.

AU - Williams, Coralie

AU - Yang, Yefeng

AU - Nakagawa, Shinichi

AU - Lagisz, Malgorzata

N1 - Code archiving: Zenodo

PY - 2025/1/29

Y1 - 2025/1/29

N2 - Publishing preprints is quickly becoming commonplace in ecology and evolutionary biology. Preprints can facilitate the rapid sharing of scientific knowledge establishing precedence and enabling feedback from the research community before peer review. Yet, significant barriers to preprint use exist, including language barriers, a lack of understanding about the benefits of preprints and a lack of diversity in the types of research outputs accepted (e.g. reports). Community-driven preprint initiatives can allow a research community to come together to break down these barriers to improve equity and coverage of global knowledge. Here, we explore the first preprints uploaded to EcoEvoRxiv (n = 1216), a community-driven preprint server for ecologists and evolutionary biologists, to characterize preprint use in ecology, evolution and conservation. Our perspective piece highlights some of the unique initiatives that EcoEvoRxiv has taken to break down barriers to scientific publishing by exploring the composition of articles, how gender and career stage influence preprint use, whether preprints are associated with greater open science practices (e.g. code and data sharing) and tracking preprint publication outcomes. Our analysis identifies areas that we still need to improve upon but highlights how community-driven initiatives, such as EcoEvoRxiv, can play a crucial role in shaping publishing practices in biology.

AB - Publishing preprints is quickly becoming commonplace in ecology and evolutionary biology. Preprints can facilitate the rapid sharing of scientific knowledge establishing precedence and enabling feedback from the research community before peer review. Yet, significant barriers to preprint use exist, including language barriers, a lack of understanding about the benefits of preprints and a lack of diversity in the types of research outputs accepted (e.g. reports). Community-driven preprint initiatives can allow a research community to come together to break down these barriers to improve equity and coverage of global knowledge. Here, we explore the first preprints uploaded to EcoEvoRxiv (n = 1216), a community-driven preprint server for ecologists and evolutionary biologists, to characterize preprint use in ecology, evolution and conservation. Our perspective piece highlights some of the unique initiatives that EcoEvoRxiv has taken to break down barriers to scientific publishing by exploring the composition of articles, how gender and career stage influence preprint use, whether preprints are associated with greater open science practices (e.g. code and data sharing) and tracking preprint publication outcomes. Our analysis identifies areas that we still need to improve upon but highlights how community-driven initiatives, such as EcoEvoRxiv, can play a crucial role in shaping publishing practices in biology.

KW - EcoEvoRxiv

KW - ecology

KW - evolution

KW - grey literature

KW - preprints

KW - publication

KW - scholarly publishing

U2 - 10.1098/rspb.2024.1487

DO - 10.1098/rspb.2024.1487

M3 - Article

AN - SCOPUS:85216963126

SN - 0962-8452

VL - 292

JO - Proceedings of the Royal Society B: Biological Sciences

JF - Proceedings of the Royal Society B: Biological Sciences

IS - 2039

M1 - 20241487

ER -

The promise of community-driven preprints in ecology and evolution

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The promise of community-driven preprints in ecology and evolution

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